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Aliases for ZNF567 Gene

Aliases for ZNF567 Gene

  • Zinc Finger Protein 567 2 3

External Ids for ZNF567 Gene

Previous GeneCards Identifiers for ZNF567 Gene

  • GC19P041872
  • GC19P037180
  • GC19P033648

Summaries for ZNF567 Gene

GeneCards Summary for ZNF567 Gene

ZNF567 (Zinc Finger Protein 567) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF182.

UniProtKB/Swiss-Prot for ZNF567 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF567 Gene

Genomics for ZNF567 Gene

Regulatory Elements for ZNF567 Gene

Transcription factor binding sites by QIAGEN in the ZNF567 gene promoter:

Genomic Location for ZNF567 Gene

Start:
36,687,612 bp from pter
End:
36,727,701 bp from pter
Size:
40,090 bases
Orientation:
Plus strand

Genomic View for ZNF567 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF567 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF567 Gene

Proteins for ZNF567 Gene

  • Protein details for ZNF567 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N184-ZN567_HUMAN
    Recommended name:
    Zinc finger protein 567
    Protein Accession:
    Q8N184
    Secondary Accessions:
    • B3KX49
    • Q6N044

    Protein attributes for ZNF567 Gene

    Size:
    647 amino acids
    Molecular mass:
    75164 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF567 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF567 Gene

Proteomics data for ZNF567 Gene at MOPED

Post-translational modifications for ZNF567 Gene

  • Ubiquitination at Lys55
  • Modification sites at PhosphoSitePlus

Other Protein References for ZNF567 Gene

No data available for DME Specific Peptides for ZNF567 Gene

Domains for ZNF567 Gene

Gene Families for ZNF567 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF567 Gene

Suggested Antigen Peptide Sequences for ZNF567 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N184

UniProtKB/Swiss-Prot:

ZN567_HUMAN :
  • Q8N184
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 15 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF567: view

Function for ZNF567 Gene

Molecular function for ZNF567 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF567 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF567: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF567 Gene

Localization for ZNF567 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF567 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF567 Gene COMPARTMENTS Subcellular localization image for ZNF567 gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF567 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF567: view

Pathways for ZNF567 Gene

SuperPathways for ZNF567 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF567: view

Pathways by source for ZNF567 Gene

2 Reactome pathways for ZNF567 Gene

Gene Ontology (GO) - Biological Process for ZNF567 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF567: view

Transcripts for ZNF567 Gene

Unigene Clusters for ZNF567 Gene

Zinc finger protein 567:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF567

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF567 Gene

ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5
SP1: -
SP2:
SP3:

Relevant External Links for ZNF567 Gene

GeneLoc Exon Structure for
ZNF567
ECgene alternative splicing isoforms for
ZNF567

Expression for ZNF567 Gene

mRNA expression in normal human tissues for ZNF567 Gene

SOURCE GeneReport for Unigene cluster for ZNF567 Gene Hs.412517

genes like me logo Genes that share expressions with ZNF567: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for ZNF567 Gene

Orthologs for ZNF567 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF567 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF567 35
  • 99.73 (n)
  • 99.51 (a)
ZNF567 36
  • 95 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF567 35
  • 90.69 (n)
  • 90.26 (a)
ZNF567 36
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp300 35
  • 61.76 (n)
  • 47.14 (a)
Zfp300 16
Zfp719 36
  • 30 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia Zfp300 35
  • 60.53 (n)
  • 47.7 (a)
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 32 (a)
OneToMany
Species with no ortholog for ZNF567:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF567 Gene

ENSEMBL:
Gene Tree for ZNF567 (if available)
TreeFam:
Gene Tree for ZNF567 (if available)

Paralogs for ZNF567 Gene

Selected SIMAP similar genes for ZNF567 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF567: view

Variants for ZNF567 Gene

Sequence variations from dbSNP and Humsavar for ZNF567 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1054520 -- 36,721,063(+) GAGTT(A/T)CCACT utr-variant-3-prime, intron-variant
rs1357879 -- 36,710,385(-) AAAAA(A/G)GAGTG intron-variant
rs1525133 -- 36,708,348(-) taatt(A/C)tttaa intron-variant
rs1830031 -- 36,712,347(-) GACTT(A/G)GCCAG intron-variant
rs3108178 -- 36,705,192(-) gagaa(A/G)tgagg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF567 Gene

Variant ID Type Subtype PubMed ID
nsv833817 CNV Loss 17160897
nsv469794 CNV Complex 16826518
esv34384 CNV Loss 17911159
nsv817833 CNV Loss 17921354
nsv470139 CNV Loss 18288195
nsv911649 CNV Loss 21882294

Relevant External Links for ZNF567 Gene

HapMap Linkage Disequilibrium report
ZNF567

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF567 Gene

Disorders for ZNF567 Gene

Relevant External Links for ZNF567

Genetic Association Database (GAD)
ZNF567
genes like me logo Genes that share disorders with ZNF567: view

No data available for UniProtKB/Swiss-Prot for ZNF567 Gene

Publications for ZNF567 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. An atlas of combinatorial transcriptional regulation in mouse and man. (PMID: 20211142) Ravasi T. … Hayashizaki Y. (Cell 2010) 3

Products for ZNF567 Gene

Sources for ZNF567 Gene

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