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Aliases for ZNF561-AS1 Gene

Subcategory (RNA class) for ZNF561-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF561-AS1 Gene

  • ZNF561 Antisense RNA 1 (Head To Head) 2 3 5
  • C19orf82 3 4
  • Chromosome 19 Open Reading Frame 82 2
  • Uncharacterized Protein C19orf82 3
  • ZNF561 Antisense Gene Protein 1 4
  • ZNF561 Antisense RNA 1 4

External Ids for ZNF561-AS1 Gene

Previous HGNC Symbols for ZNF561-AS1 Gene

  • C19orf82

Summaries for ZNF561-AS1 Gene

GeneCards Summary for ZNF561-AS1 Gene

ZNF561-AS1 (ZNF561 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF561-AS1 Gene

Genomics for ZNF561-AS1 Gene

Regulatory Elements for ZNF561-AS1 Gene


Promoters for ZNF561-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZNF561-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF561-AS1 Gene

Chromosome:
19
Start:
9,621,291 bp from pter
End:
9,645,896 bp from pter
Size:
24,606 bases
Orientation:
Plus strand

Genomic View for ZNF561-AS1 Gene

Genes around ZNF561-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF561-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF561-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF561-AS1 Gene

Proteins for ZNF561-AS1 Gene

  • Protein details for ZNF561-AS1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    K7EIQ3-CS082_HUMAN
    Recommended name:
    Uncharacterized protein ZNF561-AS1
    Protein Accession:
    K7EIQ3

    Protein attributes for ZNF561-AS1 Gene

    Size:
    104 amino acids
    Molecular mass:
    11601 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF561-AS1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF561-AS1 Gene

Proteomics data for ZNF561-AS1 Gene at MOPED

Post-translational modifications for ZNF561-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF561-AS1 Gene

Domains & Families for ZNF561-AS1 Gene

Protein Domains for ZNF561-AS1 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZNF561-AS1: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF561-AS1 Gene

Function for ZNF561-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF561-AS1 Gene

Localization for ZNF561-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF561-AS1 Gene

Pathways & Interactions for ZNF561-AS1 Gene

SuperPathways for ZNF561-AS1 Gene

No Data Available

Interacting Proteins for ZNF561-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF561-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF561-AS1 Gene

Drugs & Compounds for ZNF561-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF561-AS1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF561-AS1 Gene

No ASD Table

Relevant External Links for ZNF561-AS1 Gene

GeneLoc Exon Structure for
ZNF561-AS1
ECgene alternative splicing isoforms for
ZNF561-AS1

Expression for ZNF561-AS1 Gene

mRNA expression in normal human tissues for ZNF561-AS1 Gene

Protein differential expression in normal tissues from HIPED for ZNF561-AS1 Gene

This gene is overexpressed in Cerebrospinal fluid (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF561-AS1 Gene



genes like me logo Genes that share expression patterns with ZNF561-AS1: view

Protein tissue co-expression partners for ZNF561-AS1 Gene

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF561-AS1 Gene

Orthologs for ZNF561-AS1 Gene

Evolution for ZNF561-AS1 Gene

ENSEMBL:
Gene Tree for ZNF561-AS1 (if available)
TreeFam:
Gene Tree for ZNF561-AS1 (if available)

No data available for Orthologs for ZNF561-AS1 Gene

Paralogs for ZNF561-AS1 Gene

No data available for Paralogs for ZNF561-AS1 Gene

Variants for ZNF561-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF561-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs12975791 -- 9,635,142(+) caaaa(A/C)caata downstream-variant-500B
rs8107442 -- 9,634,829(+) AGATA(G/T)ATGGT nc-transcript-variant
rs73008109 -- 9,623,380(+) GATCT(C/T)GAACT intron-variant
rs73008113 -- 9,627,520(+) AAAAT(C/T)ATGCC intron-variant
rs73008114 -- 9,628,293(+) GGGGA(A/G)GAAAG intron-variant

Variation tolerance for ZNF561-AS1 Gene

Gene Damage Index Score: 0.94; 19.45% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for ZNF561-AS1 Gene

Disorders for ZNF561-AS1 Gene

Relevant External Links for ZNF561-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF561-AS1

No disorders were found for ZNF561-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF561-AS1 Gene

Publications for ZNF561-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ZNF561-AS1 Gene

Sources for ZNF561-AS1 Gene

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