Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF551 Gene

Aliases for ZNF551 Gene

  • Zinc Finger Protein 551 2 3
  • Zinc Finger Protein KOX23 4
  • KOX23 4

External Ids for ZNF551 Gene

Summaries for ZNF551 Gene

GeneCards Summary for ZNF551 Gene

ZNF551 (Zinc Finger Protein 551) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF17.

UniProtKB/Swiss-Prot for ZNF551 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF551 Gene

Genomics for ZNF551 Gene

Genomic Location for ZNF551 Gene

Start:
57,681,969 bp from pter
End:
57,717,301 bp from pter
Size:
35,333 bases
Orientation:
Plus strand

Genomic View for ZNF551 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF551 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF551 Gene

Regulatory Elements for ZNF551 Gene

Proteins for ZNF551 Gene

  • Protein details for ZNF551 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z340-ZN551_HUMAN
    Recommended name:
    Zinc finger protein 551
    Protein Accession:
    Q7Z340
    Secondary Accessions:
    • B4DU22
    • P17034
    • Q8N246
    • Q9BRY1

    Protein attributes for ZNF551 Gene

    Size:
    670 amino acids
    Molecular mass:
    77515 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH05868.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF551 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF551 Gene

Proteomics data for ZNF551 Gene at MOPED

Post-translational modifications for ZNF551 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys130 and Lys347

Other Protein References for ZNF551 Gene

ENSEMBL proteins:
Reactome Protein details:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF551 Gene

Domains for ZNF551 Gene

Gene Families for ZNF551 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF551 Gene

UniProtKB/Swiss-Prot:

ZN551_HUMAN
Domain:
  • Contains 1 KRAB domain.:
    • Q7Z340
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q7Z340
Similarity:
  • Contains 14 C2H2-type zinc fingers.:
    • Q7Z340
genes like me logo Genes that share domains with ZNF551: view

Function for ZNF551 Gene

Molecular function for ZNF551 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF551 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF551: view

Phenotypes for ZNF551 Gene

GenomeRNAi human phenotypes for ZNF551:
genes like me logo Genes that share phenotypes with ZNF551: view

miRNA for ZNF551 Gene

miRTarBase miRNAs that target ZNF551

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF551 Gene

Localization for ZNF551 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF551 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF551 Gene COMPARTMENTS Subcellular localization image for ZNF551 gene
Compartment Confidence
nucleus 4

Gene Ontology (GO) - Cellular Components for ZNF551 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF551: view

Pathways for ZNF551 Gene

SuperPathways for ZNF551 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF551: view

Pathways by source for ZNF551 Gene

2 Reactome pathways for ZNF551 Gene

Interacting Proteins for ZNF551 Gene

Gene Ontology (GO) - Biological Process for ZNF551 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF551: view

Transcripts for ZNF551 Gene

Unigene Clusters for ZNF551 Gene

Zinc finger protein 551:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF551 Gene

No ASD Table

Relevant External Links for ZNF551 Gene

GeneLoc Exon Structure for
ZNF551
ECgene alternative splicing isoforms for
ZNF551

Expression for ZNF551 Gene

mRNA expression in normal human tissues for ZNF551 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF551 Gene

SOURCE GeneReport for Unigene cluster for ZNF551 Gene Hs.109540

genes like me logo Genes that share expressions with ZNF551: view

Orthologs for ZNF551 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF551 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF551 36
  • 99.65 (n)
  • 99.25 (a)
ZNF551 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF551 37
  • 62 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 37
  • 45 (a)
ManyToMany
LOC102155192 36
  • 81.34 (n)
  • 73.23 (a)
mouse
(Mus musculus)
Mammalia Zfp551 36
  • 74.93 (n)
  • 65.05 (a)
Zfp551 16
Zfp551 37
  • 47 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp551 36
  • 75.62 (n)
  • 64.75 (a)
Species with no ortholog for ZNF551:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF551 Gene

ENSEMBL:
Gene Tree for ZNF551 (if available)
TreeFam:
Gene Tree for ZNF551 (if available)

Paralogs for ZNF551 Gene

Selected SIMAP similar genes for ZNF551 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for ZNF551 Gene

genes like me logo Genes that share paralogs with ZNF551: view

Variants for ZNF551 Gene

Sequence variations from dbSNP and Humsavar for ZNF551 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs752150 -- 57,684,839(+) AGAGA(A/G)AATAA intron-variant
rs2074342 -- 57,682,746(+) CAGCC(A/C)GCCCA intron-variant
rs3746208 -- 57,688,731(-) AAAAA(A/G)GTAAT utr-variant-3-prime, nc-transcript-variant
rs4801513 -- 57,683,275(+) agcag(G/T)tggat intron-variant
rs10401878 -- 57,679,987(+) gagag(A/G)atcac upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF551 Gene

Variant ID Type Subtype PubMed ID
nsv912528 CNV Gain 21882294

Relevant External Links for ZNF551 Gene

HapMap Linkage Disequilibrium report
ZNF551
Human Gene Mutation Database (HGMD)
ZNF551

Disorders for ZNF551 Gene

No disorders were found for ZNF551 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF551 Gene

Publications for ZNF551 Gene

  1. Multiple genes encoding zinc finger domains are expressed in human T cells. (PMID: 2288909) Thiesen H.-J. (New Biol. 1990) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  5. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4

Products for ZNF551 Gene

Sources for ZNF551 Gene

Back to Top

Content