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Aliases for ZNF547 Gene

Aliases for ZNF547 Gene

  • Zinc Finger Protein 547 2 3 5

External Ids for ZNF547 Gene

Previous GeneCards Identifiers for ZNF547 Gene

  • GC19P062568
  • GC19P062569
  • GC19P057875
  • GC19P054187
  • GC19P057365
  • GC19P057366
  • GC19P057367
  • GC19P057368
  • GC19P057372

Summaries for ZNF547 Gene

GeneCards Summary for ZNF547 Gene

ZNF547 (Zinc Finger Protein 547) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF548.

UniProtKB/Swiss-Prot for ZNF547 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF547 Gene

Genomics for ZNF547 Gene

Regulatory Elements for ZNF547 Gene

Enhancers for ZNF547 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G057278 1.4 ENCODE dbSUPER 11.6 -82.0 -81960 6.7 CREB3L1 AGO1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC ZNF264 TRAPPC2B ZNF547 ZNF805 AURKC LOC105372476 ENSG00000268713 ENSG00000268205 ENSG00000279541
GH19G057319 1.1 ENCODE 11 -42.6 -42630 2.1 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 SP3 ZNF304 TRAPPC2B ZNF547 ZNF805 AURKC ZNF543 RPL19P19 ZNF256 ZNF548 USP29
GH19G057914 1.1 ENCODE 4.5 +552.3 552326 3.3 PKNOX1 FOXA2 MLX CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZBTB7B YY1 LOC100128398 ENSG00000269867 ZNF417 ZNF587 ZNF547 ENSG00000269476 ZNF814
GH19G056866 0.5 ENCODE 4.8 -496.6 -496611 1.0 RFX1 ZNF274 EP300 ZNF547 LOC105372474 GC19P056967
GH19G057321 0.2 ENCODE 11 -41.5 -41488 0.2 ZNF304 TRAPPC2B ZNF547 ZNF805 AURKC RPL19P19 ZNF256 USP29 VN1R1 ENSG00000268678
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF547 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF547 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000111795 124 2000 HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1
ENSR00000111795 166 2000 HDGF PKNOX1 FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1

Genomic Location for ZNF547 Gene

Chromosome:
19
Start:
57,363,435 bp from pter
End:
57,379,565 bp from pter
Size:
16,131 bases
Orientation:
Plus strand

Genomic View for ZNF547 Gene

Genes around ZNF547 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF547 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF547 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF547 Gene

Proteins for ZNF547 Gene

  • Protein details for ZNF547 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IVP9-ZN547_HUMAN
    Recommended name:
    Zinc finger protein 547
    Protein Accession:
    Q8IVP9
    Secondary Accessions:
    • A8K5Z9
    • Q96NC4

    Protein attributes for ZNF547 Gene

    Size:
    402 amino acids
    Molecular mass:
    45956 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF547 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF547 Gene

Post-translational modifications for ZNF547 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF547 Gene

No data available for DME Specific Peptides for ZNF547 Gene

Domains & Families for ZNF547 Gene

Gene Families for ZNF547 Gene

Protein Domains for ZNF547 Gene

Suggested Antigen Peptide Sequences for ZNF547 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IVP9

UniProtKB/Swiss-Prot:

ZN547_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZNF547: view

Function for ZNF547 Gene

Molecular function for ZNF547 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF547: view
genes like me logo Genes that share phenotypes with ZNF547: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF547 Gene

Localization for ZNF547 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF547 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF547 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF547: view

Pathways & Interactions for ZNF547 Gene

SuperPathways for ZNF547 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF547: view

Pathways by source for ZNF547 Gene

2 Reactome pathways for ZNF547 Gene

Interacting Proteins for ZNF547 Gene

Gene Ontology (GO) - Biological Process for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF547: view

No data available for SIGNOR curated interactions for ZNF547 Gene

Drugs & Compounds for ZNF547 Gene

No Compound Related Data Available

Transcripts for ZNF547 Gene

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF547 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c
SP1: -
SP2: - -
SP3:
SP4:

Relevant External Links for ZNF547 Gene

GeneLoc Exon Structure for
ZNF547
ECgene alternative splicing isoforms for
ZNF547

Expression for ZNF547 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF547 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF547 Gene:

ZNF547

Evidence on tissue expression from TISSUES for ZNF547 Gene

  • Nervous system(4.1)
genes like me logo Genes that share expression patterns with ZNF547: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF547 Gene

Orthologs for ZNF547 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF547 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF547 34 35
  • 99.42 (n)
dog
(Canis familiaris)
Mammalia ZNF547 35
  • 45 (a)
OneToOne
Species where no ortholog for ZNF547 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF547 Gene

ENSEMBL:
Gene Tree for ZNF547 (if available)
TreeFam:
Gene Tree for ZNF547 (if available)

Paralogs for ZNF547 Gene

(544) SIMAP similar genes for ZNF547 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF547: view

Variants for ZNF547 Gene

Sequence variations from dbSNP and Humsavar for ZNF547 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000174064 -- 57,365,862(+) CTTTC(-/T)TTTTT intron-variant
rs1000249014 -- 57,366,030(+) TGGCT(A/C)ATTTT intron-variant
rs1000614090 -- 57,370,850(+) CTCTT(C/T)CACAT intron-variant
rs1000630374 -- 57,376,728(+) AACTT(A/T)TTCGT intron-variant
rs1000872006 -- 57,362,631(+) TATGG(A/T)ATGGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZNF547 Gene

Variant ID Type Subtype PubMed ID
nsv960881 CNV duplication 23825009

Variation tolerance for ZNF547 Gene

Residual Variation Intolerance Score: 45% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.29; 25.73% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF547 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF547

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF547 Gene

Disorders for ZNF547 Gene

Relevant External Links for ZNF547

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF547

No disorders were found for ZNF547 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF547 Gene

Publications for ZNF547 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF547 Gene

Sources for ZNF547 Gene

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