Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF547 Gene

Aliases for ZNF547 Gene

  • Zinc Finger Protein 547 2 3 5

External Ids for ZNF547 Gene

Previous GeneCards Identifiers for ZNF547 Gene

  • GC19P062568
  • GC19P062569
  • GC19P057875
  • GC19P054187
  • GC19P057365
  • GC19P057366
  • GC19P057367
  • GC19P057368

Summaries for ZNF547 Gene

GeneCards Summary for ZNF547 Gene

ZNF547 (Zinc Finger Protein 547) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF548.

UniProtKB/Swiss-Prot for ZNF547 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF547 Gene

Genomics for ZNF547 Gene

Regulatory Elements for ZNF547 Gene

Enhancers for ZNF547 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F057278 0.2 ENCODE 11.6 -82.0 -81960 6.7 HDGF PKNOX1 CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ZNF417 ZNF805 ZNF550 ZNF17 ZNF606 ZNF264 ENSG00000268713 ZNF587 ZNF773 ZNF543
GH19F057321 0.2 ENCODE 11 -41.5 -41488 0.2 ZNF304 TRAPPC2B ZNF547 ZNF805 AURKC RPL19P19 ZNF256 USP29 VN1R1 ENSG00000268678
GH19F057319 1 ENCODE 11 -42.6 -42630 2.1 HDGF PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF143 SP3 SP5 ZNF304 ZNF17 TRAPPC2B ZNF547 ZNF805 AURKC ZNF550 ZNF543 RPL19P19 ZNF256
GH19F056866 0.4 ENCODE 4.8 -496.6 -496611 1.0 ZNF274 RFX1 ZNF547 LOC105372474 GC19P056966
GH19F057914 0.2 ENCODE 4.5 +552.3 552326 3.3 PKNOX1 ATF1 CREB3L1 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF48 ETS1 LOC100128398 ENSG00000269867 ZNF417 LOC105372483 ZNF805 ZNF17 ZNF587 RPS5 ZNF550 ZNF547
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF547 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF547 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000045611 366 2399 HDGF PKNOX1 ATF1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 BRCA1 ZNF2

Genomic Location for ZNF547 Gene

Chromosome:
19
Start:
57,363,435 bp from pter
End:
57,379,565 bp from pter
Size:
16,131 bases
Orientation:
Plus strand

Genomic View for ZNF547 Gene

Genes around ZNF547 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF547 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF547 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF547 Gene

Proteins for ZNF547 Gene

  • Protein details for ZNF547 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IVP9-ZN547_HUMAN
    Recommended name:
    Zinc finger protein 547
    Protein Accession:
    Q8IVP9
    Secondary Accessions:
    • A8K5Z9
    • Q96NC4

    Protein attributes for ZNF547 Gene

    Size:
    402 amino acids
    Molecular mass:
    45956 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF547 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF547 Gene

Post-translational modifications for ZNF547 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF547 Gene

No data available for DME Specific Peptides for ZNF547 Gene

Domains & Families for ZNF547 Gene

Gene Families for ZNF547 Gene

Protein Domains for ZNF547 Gene

Suggested Antigen Peptide Sequences for ZNF547 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8IVP9

UniProtKB/Swiss-Prot:

ZN547_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 10 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 10 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF547: view

Function for ZNF547 Gene

Molecular function for ZNF547 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF547: view
genes like me logo Genes that share phenotypes with ZNF547: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF547 Gene

Localization for ZNF547 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF547 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF547 Gene COMPARTMENTS Subcellular localization image for ZNF547 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF547: view

Pathways & Interactions for ZNF547 Gene

SuperPathways for ZNF547 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF547: view

Pathways by source for ZNF547 Gene

2 Reactome pathways for ZNF547 Gene

Interacting Proteins for ZNF547 Gene

Gene Ontology (GO) - Biological Process for ZNF547 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF547: view

No data available for SIGNOR curated interactions for ZNF547 Gene

Transcripts for ZNF547 Gene

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF547 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b · 6c
SP1: -
SP2: - -
SP3:
SP4:

Relevant External Links for ZNF547 Gene

GeneLoc Exon Structure for
ZNF547
ECgene alternative splicing isoforms for
ZNF547

Expression for ZNF547 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF547 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF547 Gene:

ZNF547
genes like me logo Genes that share expression patterns with ZNF547: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF547 Gene

Orthologs for ZNF547 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF547 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF547 34 35
  • 99.42 (n)
dog
(Canis familiaris)
Mammalia ZNF547 35
  • 45 (a)
OneToOne
Species where no ortholog for ZNF547 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF547 Gene

ENSEMBL:
Gene Tree for ZNF547 (if available)
TreeFam:
Gene Tree for ZNF547 (if available)

Paralogs for ZNF547 Gene

(544) SIMAP similar genes for ZNF547 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF547: view

Variants for ZNF547 Gene

Sequence variations from dbSNP and Humsavar for ZNF547 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10402296 -- 57,378,804(+) ctctt(A/T)atctt utr-variant-3-prime
rs10403190 -- 57,379,179(+) attct(C/T)attgg utr-variant-3-prime
rs10404134 -- 57,375,618(+) gatca(A/C)gccac intron-variant
rs10411096 -- 57,367,643(+) GCCTA(A/G)AAAAA intron-variant
rs10413160 -- 57,377,234(+) AATAC(C/T)CAGCC reference, synonymous-codon

Structural Variations from Database of Genomic Variants (DGV) for ZNF547 Gene

Variant ID Type Subtype PubMed ID
nsv960881 CNV duplication 23825009

Variation tolerance for ZNF547 Gene

Residual Variation Intolerance Score: 45% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.29; 25.73% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF547 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF547

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF547 Gene

Disorders for ZNF547 Gene

Relevant External Links for ZNF547

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF547

No disorders were found for ZNF547 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF547 Gene

Publications for ZNF547 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZNF547 Gene

Sources for ZNF547 Gene

Content
Loading form....