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Aliases for ZNF503-AS2 Gene

Subcategory (RNA class) for ZNF503-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF503-AS2 Gene

  • ZNF503 Antisense RNA 2 2 3 4 5
  • ZNF503 Antisense RNA 2 (Non-Protein Coding) 2 3
  • NCRNA00245 3 4
  • C10orf41 3 4
  • Chromosome 10 Open Reading Frame 41 2
  • Non-Protein Coding RNA 245 2

External Ids for ZNF503-AS2 Gene

Previous HGNC Symbols for ZNF503-AS2 Gene

  • C10orf41
  • NCRNA00245

Previous GeneCards Identifiers for ZNF503-AS2 Gene

  • GC10P077164

Summaries for ZNF503-AS2 Gene

GeneCards Summary for ZNF503-AS2 Gene

ZNF503-AS2 (ZNF503 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF503-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF503-AS2 Gene

Genomics for ZNF503-AS2 Gene

GeneHancer (GH) Regulatory Elements for ZNF503-AS2 Gene

Promoters and enhancers for ZNF503-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I075394 Promoter/Enhancer 3 VISTA EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.0 979 15.2 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF503 ENSG00000270087 ZNF503-AS2 KAT6B LRMDA LOC101929234 ENSG00000236842 PIR36955 ENSG00000273248 GC10P075313
GH10I076033 Enhancer 2.3 VISTA UCNEbase FANTOM5 Ensembl ENCODE 11.2 +634.1 634118 5 PKNOX1 FOXA2 MLX ARID4B FEZF1 DMAP1 ZNF2 ZNF48 ETS1 YY1 LRMDA ZNF503 ZNF503-AS2 ENSG00000236842 RNU6-673P GC10P075984 PIR51450
GH10I075282 Enhancer 1.6 UCNEbase Ensembl ENCODE dbSUPER 10.9 -117.7 -117706 2 PKNOX1 ATF1 ARNT INSM2 KLF17 SIN3A FEZF1 ZNF213 ZNF366 SCRT2 ZNF503 ZNF503-AS2 DUSP13 ZNF503-AS1 DUPD1 ENSG00000223428 GC10M075276 HMGA1P5 ENSG00000270087
GH10I075612 Enhancer 1.6 UCNEbase Ensembl ENCODE 9.9 +212.4 212364 2.2 PKNOX1 ARNT FEZF1 ZNF2 ZNF121 ZNF213 ZNF302 KLF7 RUNX3 ZNF488 LRMDA MIR606 ENSG00000236842 ZNF503 ZNF503-AS2 GC10M075584 GC10P075624
GH10I075771 Enhancer 1.4 FANTOM5 Ensembl ENCODE 10.1 +371.4 371388 2.6 PKNOX1 FOXA2 SIN3A FEZF1 DMAP1 ZNF48 YY1 FOS SP5 ZHX2 MIR606 ENSG00000236842 LRMDA ZNF503 ZNF503-AS2 GC10P075790 GC10M075724
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF503-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF503-AS2 Gene

Genomic Locations for ZNF503-AS2 Gene
chr10:75,401,519-75,408,982
(GRCh38/hg38)
Size:
7,464 bases
Orientation:
Plus strand
chr10:77,160,759-77,168,740
(GRCh37/hg19)

Genomic View for ZNF503-AS2 Gene

Genes around ZNF503-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF503-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF503-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF503-AS2 Gene

Proteins for ZNF503-AS2 Gene

  • Protein details for ZNF503-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NEH8-ZNAS2_HUMAN
    Recommended name:
    Putative uncharacterized protein encoded by ZNF503-AS2
    Protein Accession:
    A6NEH8

    Protein attributes for ZNF503-AS2 Gene

    Size:
    195 amino acids
    Molecular mass:
    20902 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF503-AS2 Gene

Post-translational modifications for ZNF503-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF503-AS2 Gene

Domains & Families for ZNF503-AS2 Gene

Protein Domains for ZNF503-AS2 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZNF503-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF503-AS2 Gene

Function for ZNF503-AS2 Gene

Phenotypes for ZNF503-AS2 Gene

GenomeRNAi human phenotypes for ZNF503-AS2:
genes like me logo Genes that share phenotypes with ZNF503-AS2: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF503-AS2 Gene

Localization for ZNF503-AS2 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF503-AS2 gene
Compartment Confidence
plasma membrane 2
mitochondrion 2
extracellular 1
nucleus 1
endoplasmic reticulum 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF503-AS2 Gene

Pathways & Interactions for ZNF503-AS2 Gene

SuperPathways for ZNF503-AS2 Gene

No Data Available

Interacting Proteins for ZNF503-AS2 Gene

Gene Ontology (GO) - Biological Process for ZNF503-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF503-AS2 Gene

Drugs & Compounds for ZNF503-AS2 Gene

No Compound Related Data Available

Transcripts for ZNF503-AS2 Gene

mRNA/cDNA for ZNF503-AS2 Gene

(4) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF503-AS2 Gene

ZNF503 antisense RNA 2:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF503-AS2 Gene

No ASD Table

Relevant External Links for ZNF503-AS2 Gene

GeneLoc Exon Structure for
ZNF503-AS2
ECgene alternative splicing isoforms for
ZNF503-AS2

Expression for ZNF503-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF503-AS2 Gene

Protein differential expression in normal tissues from HIPED for ZNF503-AS2 Gene

This gene is overexpressed in Adipocyte (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF503-AS2 Gene



Protein tissue co-expression partners for ZNF503-AS2 Gene

SOURCE GeneReport for Unigene cluster for ZNF503-AS2 Gene:

Hs.534598
genes like me logo Genes that share expression patterns with ZNF503-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF503-AS2 Gene

Orthologs for ZNF503-AS2 Gene

Evolution for ZNF503-AS2 Gene

ENSEMBL:
Gene Tree for ZNF503-AS2 (if available)
TreeFam:
Gene Tree for ZNF503-AS2 (if available)

No data available for Orthologs for ZNF503-AS2 Gene

Paralogs for ZNF503-AS2 Gene

No data available for Paralogs for ZNF503-AS2 Gene

Variants for ZNF503-AS2 Gene

Sequence variations from dbSNP and Humsavar for ZNF503-AS2 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000020860 -- 75,402,184(+) G/A genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000040967 -- 75,403,746(+) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000173764 -- 75,399,910(+) C/T upstream_transcript_variant
rs1000268383 -- 75,404,051(+) T/C genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000299723 -- 75,403,872(+) G/A genic_upstream_transcript_variant, intron_variant, non_coding_transcript_variant, upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF503-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv163n67 CNV gain 20364138
nsv1042547 CNV gain 25217958
nsv1069060 CNV deletion 25765185
nsv950978 CNV deletion 24416366

Additional Variant Information for ZNF503-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF503-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF503-AS2 Gene

Disorders for ZNF503-AS2 Gene

Additional Disease Information for ZNF503-AS2

No disorders were found for ZNF503-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF503-AS2 Gene

Publications for ZNF503-AS2 Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 3 4 58
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for ZNF503-AS2 Gene

Sources for ZNF503-AS2 Gene

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