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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ZNF503 Gene

protein-coding   GIFtS: 45
GCID: GC10M077157

Zinc Finger Protein 503

  Search for ZNF503
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
Zinc Finger Protein 5031 2
NOLZ-12
NOLZ12

External Ids:    HGNC: 235891   Entrez Gene: 848582   Ensembl: ENSG000001656557   OMIM: 6139025   UniProtKB: Q96F453   

Export aliases for ZNF503 gene to outside databases

Previous GC identifers: GC10M076502 GC10M076827 GC10M071156 GC10M077040


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

GeneCards Summary for ZNF503 Gene: 
ZNF503 (zinc finger protein 503) is a protein-coding gene. GO annotations related to this gene include zinc ion binding and nucleic acid binding. An important paralog of this gene is ZNF703.

UniProtKB/Swiss-Prot: ZN503_HUMAN, Q96F45
Function: May function as a transcriptional repressor (By similarity)




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000010.10  NC_018921.2  NT_030059.13  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ZNF503 gene promoter:
         E2F-4   E2F-3a   E2F-5   E2F-2   Nkx2-5   E47   Evi-1   E2F   E2F-1   Hand1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidZNF503 promoter sequence
   Search SABiosciences Chromatin IP Primers for ZNF503

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF503


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q22.2   Ensembl cytogenetic band:  10q22.2   HGNC cytogenetic band: 10q22.3

ZNF503 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ZNF503 gene location

GeneLoc information about chromosome 10         GeneLoc Exon Structure

GeneLoc location for GC10M077157:  view genomic region     (about GC identifiers)

Start:
77,157,588 bp from pter      End:
77,161,664 bp from pter
Size:
4,077 bases      Orientation:
minus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: ZN503_HUMAN, Q96F45 (See protein sequence)
Recommended Name: Zinc finger protein 503  
Size: 646 amino acids; 62555 Da
Subcellular location: Nucleus (By similarity)
Sequence caution: Sequence=BAC03999.1; Type=Erroneous initiation;
Secondary accessions: Q8NAC5 Q96E25 Q96IJ0
Alternative splicing: 3 isoforms:  Q96F45-1   Q96F45-2   Q96F45-3   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for ZNF503: NX_Q96F45

Explore proteomics data for ZNF503 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_Q96F45

  • ZNF503 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    ZNF503 Protein Expression
    REFSEQ proteins: NP_116161.2  
    ENSEMBL proteins: 
     ENSP00000361602   ENSP00000438988  

    Human Recombinant Protein Products for ZNF503: 
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    Novus Biologicals ZNF503 Lysates
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    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for ZNF503 

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--

    ZNF503 for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    ZNF: Zinc fingers, C2H2-type

    4 InterPro protein domains:
     IPR022129 Tscrpt_rep_NocA-like
     IPR015880 Znf_C2H2-like
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR007087 Znf_C2H2

    Graphical View of Domain Structure for InterPro Entry Q96F45

    ProtoNet protein and cluster: Q96F45

    UniProtKB/Swiss-Prot: ZN503_HUMAN, Q96F45
    Similarity: Belongs to the Elbow/Noc family
    Similarity: Contains 1 C2H2-type zinc finger


    ZNF503 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ZN503_HUMAN, Q96F45
    Function: May function as a transcriptional repressor (By similarity)

         Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003676nucleic acid binding IEA--
    GO:0008270zinc ion binding ----
    GO:0046872metal ion binding IEA--
         
    ZNF503 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for ZNF503:
     Decreased viability with pacli 

    Animal Models:
       inGenious Targeting Laboratory - Custom generated mouse model solutions for ZNF503 
       inGenious Targeting Laboratory - Custom generated inducible mouse model solutions for ZNF503

       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for ZNF503 
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    miRNA
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    SwitchGear 3'UTR luciferase reporter plasmidZNF503 3' UTR sequence
    Inhib. RNA
    Products:
        
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF503


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF503

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--

    ZNF503 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ZNF503 (ZN503)

    Search CenterWatch for drugs/clinical trials and news about ZNF503 / ZN503

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ZNF503 gene: 
    NM_032772.4  

    Unigene Cluster for ZNF503:

    Zinc finger protein 503
    Hs.195710  [show with all ESTs]
    Unigene Representative Sequence: NM_032772
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000372524(uc001jxg.3) ENST00000535216
    miRNA
    Products:
         
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat ZNF503
    8/39 QIAGEN miScript miRNA Assays for microRNAs that regulate ZNF503 (see all 39):
    hsa-miR-548j hsa-miR-142-5p hsa-miR-374c hsa-miR-124 hsa-miR-4325 hsa-miR-3613-3p hsa-miR-506 hsa-miR-548d-5p
    SwitchGear 3'UTR luciferase reporter plasmidZNF503 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene RNAi products in human, mouse, rat for ZNF503
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat ZNF503
    Clone
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    OriGene clones in human, mouse for ZNF503 (see all 8)
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    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: ZNF503 (NM_032772)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for ZNF503
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ZNF503
    Sirion Biotech Customized lentivirus for stable overexpression of ZNF503 
                         Customized lentivirus expression plasmids for stable overexpression of ZNF503 
    Primer
    Products:
        
    OriGene qPCR primer pairs and template standards for ZNF503
    OriGene qSTAR qPCR primer pairs in human, mouse for ZNF503
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      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ZNF503
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ZNF503

    Additional mRNA sequence: 

    AK092897.1 AK125693.1 AK127647.1 AK225851.1 AK290311.1 BC007494.2 BC011625.2 BC013011.2 
    BC021165.2 

    10 DOTS entries:

    DT.426680  DT.40228435  DT.121248193  DT.40249070  DT.99993454  DT.121248184  DT.91806245  DT.92420612 
    DT.95352641  DT.314585 

    24/111 AceView cDNA sequences (see all 111):

    BU542610 AI522172 BM055400 CA454984 AA287149 BM893951 AK092897 BM312777 
    BC011625 BG285263 BM311157 BI494655 BX105802 AW263413 BM272508 BF791376 
    BC021165 T35158 BM708238 AI928396 CK904943 AI910591 CA394318 AK127647 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ZNF503 expression in normal human tissues (normalized intensities)      ZNF503 embryonic expression: see
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: CACATCCCCA
    ZNF503 Expression
    About this image


    ZNF503 expression in embryonic tissues and stem cells    About this table
    Data from LifeMap, the Embryonic Development and Stem Cells Database 
     5/23 selected tissues (see all 23) fully expand
     
     Brain (Nervous System)    fully expand to see all 14 entries
             Thalamus
             Septum   
     
     Uncategorized (Uncategorized)    fully expand to see all 4 entries
             PureStem Progenitor W10
     
     Neural Tube (Nervous System)    fully expand to see all 3 entries
             Metencephalon
     
     Eye (Sensory Organs)    fully expand to see all 2 entries
             Glycinergic Amacrine Cells Inner Nuclear Layer
     
     Nose (Sensory Organs)    fully expand to see all 2 entries
             sensory organ/nose/nasal cavity   

    See ZNF503 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ZNF503

    SOURCE GeneReport for Unigene cluster: Hs.195710
        SABiosciences Custom PCR Arrays for ZNF503
    Primer
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF503

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for ZNF503 gene from 6/12 species (see all 12)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Zfp5031 , 5 zinc finger protein 5031, 5 89.77(n)1
    96.9(a)1
      14 (12.00 cM)5
    2188201  NM_145459.31  NP_663434.21 
     219839625 
    chicken
    (Gallus gallus)
    Aves ZNF5031 zinc finger protein 503 67.78(n)
    62.2(a)
      770136  XM_001233456.2  XP_001233457.2 
    lizard
    (Anolis carolinensis)
    Reptilia ZNF5036
    Uncharacterized protein
    67(a)
    1 ↔ 1
    GL343196.1(3191590-3197857)
    tropical clawed frog
    (Xenopus tropicalis)
    Amphibia Str.188102 Transcribed sequence with weak similarity to protein more 74.89(n)    AL851315.2 
    zebrafish
    (Danio rerio)
    Actinopterygii noz22 nocA related zinc finger 2 76.8(n)   324913  AY371081.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta elB1 elbow B 42.66(n)
    29.94(a)
      34844  NM_205990.1  NP_995712.1 


    ENSEMBL Gene Tree for ZNF503 (if available)
    TreeFam Gene Tree for ZNF503 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ZNF503 gene
    ZNF7032  
    1 SIMAP similar gene for ZNF503 using alignment to 1 protein entry:     ZN503_HUMAN:
    ZNF703

    ZNF503 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/65 SNPs in ZNF503 are shown (see all 65)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 10 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1840307711,2
    --77157154(+) CCCAGC/TGCGCT 1 -- int10--------
    rs1112402631,2
    C--77157183(+) CCCGGC/TCCAGG 1 -- int11Minor allele frequency- T:0.50CSA 2
    rs1876040321,2
    C--77157237(+) AACCCA/CAATGC 1 -- int10--------
    rs1925557511,2
    --77157433(+) CTGGTA/GGCCCC 1 -- int10--------
    rs1405730781,2
    --77157454(+) TTTGCC/TTCCCA 1 -- int10--------
    rs1840511801,2
    C--77157466(+) AAAATC/TACAAC 1 -- int10--------
    rs107626661,2
    C,F,A,H--77157489(+) AATTCG/AGCCAC 1 -- int124Minor allele frequency- A:0.22NS EA NA WA CSA 2250
    rs1128251411,2
    C,F--77157544(+) CGGCCG/CAAACT 1 -- int11Minor allele frequency- C:0.50CSA 2
    rs115959411,2
    C,F,H--77157628(+) AATTTT/GAATCT 1 -- ut317Minor allele frequency- G:0.01NS EA NA 704
    rs1915959181,2
    --77157647(+) ATACAC/TTGTCT 1 -- ut310--------

    HapMap Linkage Disequilibrium report for ZNF503 (77157588 - 77161664 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 2 variations for ZNF503:    About this table     
    Variant IDTypeSubtypePubMed ID
    nsv895730CNV Loss21882294
    dgv163n67CNV Gain20364138

    SABiosciences Cancer Mutation PCR Assays
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ZNF503 for disorders           About MalaCards
    OMIM gene information: 613902    OMIM disorders: --


    ZNF503 for disorders           About GeneDecksing


    Export disorders for ZNF503 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ZNF503 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with ZNF503)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1, 3 Strausberg R.L....Marra M.A. (2002)
    3. A high-throughput approach for measuring temporal chan ges in the interactome. (PubMed id 22863883)1 Kristensen A.R....Foster L.J. (2012)
    4. Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (2011)
    5. Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. (PubMed id 19413330)2 Gauci S....Mohammed S. (2009)
    6. Identification of a developmentally regulated striatum-enriched zinc-finger gene, Nolz-1, in the mammalian brain. (PubMed id 14983057)1 Chang C.W....Liu F.C. (2004)
    7. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)2 Gerhard D.S....Malek J. (2004)
    8. Gene expression profile of human bone marrow stromal cells: high-throughput expressed sequence tag sequencing analysis. (PubMed id 11827452)1 Jia L....Francomano C.A. (2002)
    9. Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PubMed id 8125298)1 Maruyama K. and Sugano S. (1994)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 84858 HGNC: 23589 AceView: ZNF503 Ensembl:ENSG00000165655 euGenes: HUgn84858
    ECgene: ZNF503 H-InvDB: ZNF503

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ZNF503 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ZNF503 gene:
    Search GeneIP for patents involving ZNF503

    GeneCards and IP:
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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 3 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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    Category
    (GIFtS: 73)
    transforming growth factor, beta 1
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


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