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Aliases for ZNF501 Gene

Aliases for ZNF501 Gene

  • Zinc Finger Protein 501 2 3
  • Zinc Finger Protein 52 2 3 4
  • ZNF52 3 4
  • ZNF 3

External Ids for ZNF501 Gene

Previous HGNC Symbols for ZNF501 Gene

  • ZNF52

Previous GeneCards Identifiers for ZNF501 Gene

  • GC03P044731
  • GC03P044746

Summaries for ZNF501 Gene

GeneCards Summary for ZNF501 Gene

ZNF501 (Zinc Finger Protein 501) is a Protein Coding gene. An important paralog of this gene is ZNF771.

UniProtKB/Swiss-Prot for ZNF501 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF501 Gene

Genomics for ZNF501 Gene

Regulatory Elements for ZNF501 Gene

Genomic Location for ZNF501 Gene

Start:
44,729,596 bp from pter
End:
44,737,083 bp from pter
Size:
7,488 bases
Orientation:
Plus strand

Genomic View for ZNF501 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF501 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF501 Gene

Proteins for ZNF501 Gene

  • Protein details for ZNF501 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96CX3-ZN501_HUMAN
    Recommended name:
    Zinc finger protein 501
    Protein Accession:
    Q96CX3
    Secondary Accessions:
    • B4DLY7
    • Q96NU9

    Protein attributes for ZNF501 Gene

    Size:
    271 amino acids
    Molecular mass:
    31179 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF501 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF501 Gene

Proteomics data for ZNF501 Gene at MOPED

Post-translational modifications for ZNF501 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF501 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF501 Gene

Domains for ZNF501 Gene

Gene Families for ZNF501 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF501 Gene

Suggested Antigen Peptide Sequences for ZNF501 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96CX3

UniProtKB/Swiss-Prot:

ZN501_HUMAN :
  • Q96CX3
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 9 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF501: view

Function for ZNF501 Gene

Molecular function for ZNF501 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF501 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF501: view
genes like me logo Genes that share phenotypes with ZNF501: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF501

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF501 Gene

Localization for ZNF501 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF501 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF501 Gene COMPARTMENTS Subcellular localization image for ZNF501 gene
Compartment Confidence
nucleus 3
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF501 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF501: view

Pathways for ZNF501 Gene

SuperPathways for ZNF501 Gene

No Data Available

Interacting Proteins for ZNF501 Gene

Gene Ontology (GO) - Biological Process for ZNF501 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF501: view

No data available for Pathways by source for ZNF501 Gene

Transcripts for ZNF501 Gene

mRNA/cDNA for ZNF501 Gene

Unigene Clusters for ZNF501 Gene

Zinc finger protein 501:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF501

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF501 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b
SP1: - -
SP2: -
SP3: -

Relevant External Links for ZNF501 Gene

GeneLoc Exon Structure for
ZNF501
ECgene alternative splicing isoforms for
ZNF501

Expression for ZNF501 Gene

mRNA expression in normal human tissues for ZNF501 Gene

Protein differential expression in normal tissues for ZNF501 Gene

This gene is overexpressed in Platelet (28.3), CD8 Tcells (25.1), and Testis (15.6).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF501 Gene

SOURCE GeneReport for Unigene cluster for ZNF501 Gene Hs.401045

genes like me logo Genes that share expressions with ZNF501: view

Expression partners for ZNF501 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF501 Gene

Orthologs for ZNF501 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF501 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF501 35
  • 99.75 (n)
  • 99.63 (a)
ZNF501 36
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF501 36
  • 92 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii si:ch73-92e7.6 36
  • 33 (a)
ManyToMany
si:dkey-191j3.3 36
  • 44 (a)
ManyToMany
si:dkey-20i20.10 36
  • 33 (a)
ManyToMany
si:dkey-20i20.3 36
  • 32 (a)
ManyToMany
si:dkey-20i20.7 36
  • 29 (a)
ManyToMany
si:dkey-20i20.8 36
  • 33 (a)
ManyToMany
si:dkey-20i20.9 36
  • 29 (a)
ManyToMany
zgc:173575 36
  • 41 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP006701 35
  • 54.52 (n)
  • 51.72 (a)
Species with no ortholog for ZNF501:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF501 Gene

ENSEMBL:
Gene Tree for ZNF501 (if available)
TreeFam:
Gene Tree for ZNF501 (if available)

Paralogs for ZNF501 Gene

Paralogs for ZNF501 Gene

Selected SIMAP similar genes for ZNF501 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF501: view

Variants for ZNF501 Gene

Sequence variations from dbSNP and Humsavar for ZNF501 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs2009473 -- 44,730,744(+) TCGAG(A/T)AATTC intron-variant
rs2257995 -- 44,729,451(+) GCACG(C/T)CAGGT upstream-variant-2KB
rs2279908 -- 44,729,636(+) ACTTA(C/T)TCCTT utr-variant-5-prime
rs2888411 -- 44,730,955(-) TCTAC(A/C)AAGCT intron-variant
rs3796178 -- 44,731,323(-) CTCCA(A/G)TGACA intron-variant

Relevant External Links for ZNF501 Gene

HapMap Linkage Disequilibrium report
ZNF501

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZNF501 Gene

Disorders for ZNF501 Gene

No disorders were found for ZNF501 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZNF501 Gene

Publications for ZNF501 Gene

  1. Clustering of C2-H2 zinc finger motif sequences within telomeric and fragile site regions of human chromosomes. (PMID: 1505991) Lichter P. … Ward D.C. (Genomics 1992) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. (PMID: 22505724) Udeshi N.D. … Carr S.A. (Mol. Cell Proteomics 2012) 3

Products for ZNF501 Gene

Sources for ZNF501 Gene

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