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Aliases for ZNF487 Gene

Aliases for ZNF487 Gene

  • Zinc Finger Protein 487 2 3
  • Zinc Finger Protein 487, Pseudogene 2 3
  • KRAB Domain Only 1 2 3
  • ZNF487P 3 4
  • KRBO1 3 4
  • KRAB Domain Only Protein 1 4

External Ids for ZNF487 Gene

Previous HGNC Symbols for ZNF487 Gene

  • KRBO1
  • ZNF487P

Previous GeneCards Identifiers for ZNF487 Gene

  • GC10P043252
  • GC10P043933

Summaries for ZNF487 Gene

GeneCards Summary for ZNF487 Gene

ZNF487 (Zinc Finger Protein 487) is a Pseudogene. An important paralog of this gene is ZNF182.

UniProtKB/Swiss-Prot for ZNF487 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF487 Gene

Genomics for ZNF487 Gene

Regulatory Elements for ZNF487 Gene

Genomic Location for ZNF487 Gene

Start:
43,436,841 bp from pter
End:
43,483,179 bp from pter
Size:
46,339 bases
Orientation:
Plus strand

Genomic View for ZNF487 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF487 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF487 Gene

Proteins for ZNF487 Gene

  • Protein details for ZNF487 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B1APH4-ZN487_HUMAN
    Recommended name:
    Putative zinc finger protein 487
    Protein Accession:
    B1APH4
    Secondary Accessions:
    • B1APH5
    • B7Z7S5

    Protein attributes for ZNF487 Gene

    Size:
    448 amino acids
    Molecular mass:
    51624 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAI15018.3; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAO03512.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF487 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF487 Gene

Proteomics data for ZNF487 Gene at MOPED

Post-translational modifications for ZNF487 Gene

No Post-translational modifications

Other Protein References for ZNF487 Gene

No data available for DME Specific Peptides for ZNF487 Gene

Domains for ZNF487 Gene

Protein Domains for ZNF487 Gene

Suggested Antigen Peptide Sequences for ZNF487 Gene

Graphical View of Domain Structure for InterPro Entry

B1APH4

UniProtKB/Swiss-Prot:

ZN487_HUMAN :
  • B1APH4
Domain:
  • Contains 2 KRAB domains.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 3 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF487: view

No data available for Gene Families for ZNF487 Gene

Function for ZNF487 Gene

Molecular function for ZNF487 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF487 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF487: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF487 Gene

Localization for ZNF487 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF487 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF487 Gene COMPARTMENTS Subcellular localization image for ZNF487 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF487 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF487: view

Pathways for ZNF487 Gene

SuperPathways for ZNF487 Gene

No Data Available

Interacting Proteins for ZNF487 Gene

Gene Ontology (GO) - Biological Process for ZNF487 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF487: view

No data available for Pathways by source for ZNF487 Gene

Transcripts for ZNF487 Gene

mRNA/cDNA for ZNF487 Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF487

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF487 Gene

No ASD Table

Relevant External Links for ZNF487 Gene

GeneLoc Exon Structure for
ZNF487
ECgene alternative splicing isoforms for
ZNF487

Expression for ZNF487 Gene

mRNA expression in normal human tissues for ZNF487 Gene

mRNA differential expression in normal tissues according to GTEx for ZNF487 Gene

This gene is overexpressed in Testis (6.5).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ZNF487 Gene

genes like me logo Genes that share expressions with ZNF487: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ZNF487 Gene

Orthologs for ZNF487 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF487 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF33B 36
  • 24 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 16 (a)
ManyToMany
Species with no ortholog for ZNF487:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF487 Gene

ENSEMBL:
Gene Tree for ZNF487 (if available)
TreeFam:
Gene Tree for ZNF487 (if available)

Paralogs for ZNF487 Gene

genes like me logo Genes that share paralogs with ZNF487: view

Variants for ZNF487 Gene

Sequence variations from dbSNP and Humsavar for ZNF487 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1416225 -- 43,438,170(-) CAAAA(A/G)CCTGC intron-variant
rs1609638 -- 43,480,980(+) TATAA(A/G)AACAG intron-variant
rs1832468 -- 43,438,349(-) AATTA(A/G)CCGGG intron-variant
rs2244396 -- 43,437,031(-) AAGCC(C/T)TGCTG upstream-variant-2KB
rs2250444 -- 43,455,941(+) CGGGG(C/T)TCACC intron-variant

Relevant External Links for ZNF487 Gene

HapMap Linkage Disequilibrium report
ZNF487

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZNF487 Gene

Disorders for ZNF487 Gene

No disorders were found for ZNF487 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF487 Gene

Publications for ZNF487 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4
  2. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 4

Products for ZNF487 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF487
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF487
    • Block miRNA regulation of ZNF487 using miScript Target Protectors

    Sources for ZNF487 Gene

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