ZNF479 Gene
protein-coding GIFtS: 38
GCID: GC07M057191
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zinc finger protein 479
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Aliases
for ZNF479 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| Zinc Finger Protein 4791 2 | | KR191 2 | | Zinc Finger Protein Kr192 3 | | HKr192 3 | | KRAB Zinc Finger Protein KR192 |
Export aliases for ZNF479 gene to outside databasesPrevious GC identifers: GC07M056965 GC07M056449 GC07M056998 GC07Mh57320 |
Summaries
for ZNF479 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
UniProtKB/Swiss-Prot: ZN479_HUMAN, Q96JC4Function: May be involved in transcriptional regulation
|
Genomic Views
for ZNF479 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000007.13 NC_018918.1 NT_033968.6 NT_079592.2
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the ZNF479 gene promoter:
HFH-3 Lmo2 LCR-F1 GATA-1 FOXI1 POU2F1 POU2F1a SEF-1 (1) Sox9 MRF-2
Other transcription factors
Search SABiosciences Chromatin IP Primers for ZNF479
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF479 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 7p11.2 Ensembl cytogenetic band: 7p11.2 HGNC cytogenetic band: 7p11.2ZNF479 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 7 GeneLoc Exon Structure GeneLoc location for GC07M057191: view genomic region
(about GC identifiers)
Start:
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57,187,321 bp from pter |
End:
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57,207,571 bp from pter |
Size:
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20,251 bases |
Orientation:
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minus strand |
1 alternative location:
| Chr7-,CRA_TCAG 57,191,426-57,211,676 |
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Proteins
for ZNF479 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: ZN479_HUMAN, Q96JC4 (See
protein sequence)Recommended Name: Zinc finger protein 479 Size: 524 amino acids; 60598 Da
Subcellular location: Nucleus (Potential)Explore the universe of human proteins at neXtProt for ZNF479: NX_Q96JC4
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q96JC4
ZNF479 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_150376.1
ENSEMBL proteins: ENSP00000333776 Reactome Protein details: Q96JC4
Human Recombinant Protein Products:
Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005634 | nucleus |
IEA | -- |
ZNF479 for ontologies About GeneDecksing
ZNF479 Antibody Products:
Assay Products for ZNF479: |
Protein
Domains /
Families
for ZNF479 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
ZNF479 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q96JC4ProtoNet protein and cluster: Q96JC4 1 Blocks protein family: IPB001909 KRAB box
UniProtKB/Swiss-Prot: ZN479_HUMAN, Q96JC4Similarity: Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity: Contains 12 C2H2-type zinc fingersSimilarity: Contains 1 KRAB domain |
Function
for ZNF479 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: ZN479_HUMAN, Q96JC4Function: May be involved in transcriptional regulation
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
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Synthesis Service for ZNF479 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ZNF479 |
Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table
ZNF479 for ontologies About GeneDecksing
|
Pathways & Interactions
for ZNF479 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Unified GeneCards pathways About this table
See pathways by source
| Super-pathway | contained gene-specific pathways |
|---|
| 1 | Generic Transcription Pathway | |
Pathway sources
See GeneCards unified pathways
Show all pathways
2 
Reactome Pathways for ZNF479
ZNF479 for pathways About GeneDecksing
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF479
Gene Ontology (GO): 2 biological process terms (GO ID links to tree view): About this table | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006351 | transcription, DNA-dependent |
IEA | -- | | GO:0006355 | regulation of transcription, DNA-dependent |
IEA | -- |
ZNF479 for ontologies About GeneDecksing
|
Drugs & Compounds
for ZNF479 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for ZNF479
Search CenterWatch for drugs/clinical trials and news about ZNF479 / ZN479
|
Transcripts
for ZNF479 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for ZNF479 gene: NM_033273.1 Unigene Cluster for ZNF479: Zinc finger protein 479 Hs.616660 Unigene Representative Sequence: AF2776241 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000331162(uc010kzo.3)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: ZNF479 (NM_033273) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ZNF479 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ZNF479 |
Additional cDNA sequence: AF277624.1 1 DOTS entry: DT.95096029
GeneLoc Exon Structure
|
Expression
for ZNF479 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| ZNF479 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --
About this image
See ZNF479 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for ZNF479
SOURCE GeneReport for Unigene cluster: Hs.616660
UniProtKB/Swiss-Prot: ZN479_HUMAN, Q96JC4Tissue specificity: Expressed primarily in testis and fetal tissues
SABiosciences Custom PCR Arrays for ZNF479
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ZNF479
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat ZNF479 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat ZNF479 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ZNF479 |
Orthologs
for ZNF479 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of chordates.
Orthologs for ZNF479 gene from 1/5 species (see all 5) About this table
ENSEMBL Gene Tree for ZNF479 (if available)
TreeFam Gene Tree for ZNF479 (if available) |
Paralogs
for ZNF479 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for ZNF479 gene
- ZNF852 ZNF4932 ZNF4862 ZNF1002 ZNF922 ZNF7322 ZNF1382 ZNF6752
- ZNF5062 ZNF2732 ZNF66P2 ZNF6952 ZNF6262 ZNF6802 ZNF2532 ZNF932
- ZNF4922 ZNF6822 ZNF6762 ZNF1412 ZNF6812 ZNF6792 ZNF2572 ZNF2542
- ZNF7372 ZNF724P2 ZNF982 ZNF849P2 ZNF7162 ZNF7142 ZNF4292 ZNF4302
- ZNF7302 ZNF6782 ZNF1172 ZNF7082 ZNF1072 ZNF4312 ZNF902
18/534 SIMAP similar genes for ZNF479 using alignment to 2 protein entries: ZN479_HUMAN (see all proteins)
(see all similar genes):ZNF735 ZNF78L1 ZNF679 ZNF716 ZNF826P ZNF273
ZNF818P ZNF708 ZNF56 ZNF92 kr-znf3 ZNF429
ZNF98 ZNF85 ZFS-1 ZNF729 ZNF730 ZNF738
ZNF479 for paralogs About GeneDecksing
2 Pseudogenes.org Pseudogenes for ZNF479
PGOHUM00000233349 PGOHUM00000233355
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Genomic Variants
for ZNF479 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 7 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for ZNF479 (57187321 - 57207571 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for ZNF479
1 CNV: 8558 | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing ZNF479 |
|
Disorders
/ Diseases
for ZNF479 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
 ZNF479 for disorders About MalaCards
ZNF479 for disorders About GeneDecksing
Human Genome Epidemiology (HuGE) Navigator: ZNF479 (1 document)
Export disorders for ZNF479 gene to outside databases
|
Publications
for ZNF479 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for ZNF479 gene integrated from 9 sources:
(articles sorted by number of sources associating them with ZNF479) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Molecular cloning and preliminary functional analysis of two novel human KRAB zinc finger proteins, HKr18 and HKr19. (PubMed id 11410164)1, 2, 3 Mark C.... Hellman L. (2001)
- Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
|
External Searches for ZNF479 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing ZNF479 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing ZNF479 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZNF479 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for ZNF479 | Pharmacogenomics, SNPs, Pathways |
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| | |
About This Section
| Patent Information for ZNF479 gene:
Search GeneIP for patents involving ZNF479
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for ZNF479 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
 | |
 | |
 |
| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for ZNF479 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for ZNF479 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for ZNF479 | | | Browse OriGene Protein Over-expression Lysates | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for ZNF479 | | OriGene 3'-UTR Clone for ZNF479 | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for ZNF479 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for ZNF479 | | OriGene Custom Protein Services for ZNF479 | | | OriGene Custom Immunoassay Development | | |
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 | | | ZNF479 Proteins, Antibodies, CLIAs, and ELISAs |
| | | |  |  |  | | | | Search ThermoFisher Antibodies for ZNF479 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat ZNF479 |
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