Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF461 Gene

Aliases for ZNF461 Gene

  • Zinc Finger Protein 461 2 3 5
  • Gonadotropin-Inducible Ovary Transcription Repressor 1 3 4
  • GIOT-1 3 4
  • GIOT1 3 4
  • Zinc Finger Protein 28 3
  • HZF28 3

External Ids for ZNF461 Gene

Previous GeneCards Identifiers for ZNF461 Gene

  • GC19M041822
  • GC19M037128
  • GC19M033596
  • GC19M036678
  • GC19M036705
  • GC19M036897
  • GC19M036914

Summaries for ZNF461 Gene

GeneCards Summary for ZNF461 Gene

ZNF461 (Zinc Finger Protein 461) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZFP30.

UniProtKB/Swiss-Prot for ZNF461 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF461 Gene

Genomics for ZNF461 Gene

Regulatory Elements for ZNF461 Gene

Enhancers for ZNF461 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F036770 0.2 ENCODE 53.9 -105.2 -105168 2.8 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF302 ZNF345 ZNF383 ZNF850 ZNF461 ZNF567 ZNF793 ZNF790-AS1 ZNF529 ZNF607 ZNF585B
GH19F037505 0.5 ENCODE 51.7 -839.5 -839469 2.4 PKNOX1 ZNF493 ZNF133 SIN3A ZNF2 ETS1 YY1 ZNF121 GLIS2 ZNF302 ZNF793 ZNF383 ZNF345 ZNF850 ZNF790-AS1 ZNF529 ZNF461 ZNF607 ZNF573 ZNF568
GH19F036113 0.2 ENCODE 47.5 +551.8 551847 3.1 CREB3L1 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF416 ZNF548 ZNF263 ZNF850 TMEM147-AS1 ZNF345 ZNF567 KMT2B ZNF568 ZNF790-AS1 HAUS5 ZNF420 ZNF461
GH19F036915 0.8 FANTOM5 ENCODE 45.7 -249.5 -249504 1.9 PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF302 ZNF416 ZNF143 ZNF548 ZNF263 ZNF383 ZNF345 ZNF850 ZNF790-AS1 ZNF793 ZNF585A ZNF568 ZNF607 ZNF529 ZNF567
GH19F036572 1.1 ENCODE 37.2 +93.6 93623 3.0 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF383 ZFP82 ZNF345 ZNF793 LINC00665 ZNF529 ZNF790-AS1 ZNF461 ZNF568 LINC01534
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF461 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF461 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001418993 230 2600 PKNOX1 MLX WRNIP1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for ZNF461 Gene

Chromosome:
19
Start:
36,636,683 bp from pter
End:
36,667,131 bp from pter
Size:
30,449 bases
Orientation:
Minus strand

Genomic View for ZNF461 Gene

Genes around ZNF461 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF461 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF461 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF461 Gene

Proteins for ZNF461 Gene

  • Protein details for ZNF461 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8TAF7-ZN461_HUMAN
    Recommended name:
    Zinc finger protein 461
    Protein Accession:
    Q8TAF7
    Secondary Accessions:
    • A8K9W9
    • Q6VSF7
    • Q9ULZ8

    Protein attributes for ZNF461 Gene

    Size:
    563 amino acids
    Molecular mass:
    66214 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF461 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF461 Gene

Post-translational modifications for ZNF461 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF461 Gene

Domains & Families for ZNF461 Gene

Gene Families for ZNF461 Gene

Suggested Antigen Peptide Sequences for ZNF461 Gene

Graphical View of Domain Structure for InterPro Entry

Q8TAF7

UniProtKB/Swiss-Prot:

ZN461_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 12 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 12 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF461: view

Function for ZNF461 Gene

Molecular function for ZNF461 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF461 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF461: view

Phenotypes for ZNF461 Gene

genes like me logo Genes that share phenotypes with ZNF461: view

Animal Model Products

miRNA for ZNF461 Gene

miRTarBase miRNAs that target ZNF461

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF461 Gene

Localization for ZNF461 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF461 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF461 Gene COMPARTMENTS Subcellular localization image for ZNF461 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF461 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF461: view

Pathways & Interactions for ZNF461 Gene

SuperPathways for ZNF461 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF461: view

Pathways by source for ZNF461 Gene

2 Reactome pathways for ZNF461 Gene

Gene Ontology (GO) - Biological Process for ZNF461 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA,IBA --
genes like me logo Genes that share ontologies with ZNF461: view

No data available for SIGNOR curated interactions for ZNF461 Gene

Transcripts for ZNF461 Gene

Unigene Clusters for ZNF461 Gene

Zinc finger protein 461:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF461 Gene

No ASD Table

Relevant External Links for ZNF461 Gene

GeneLoc Exon Structure for
ZNF461
ECgene alternative splicing isoforms for
ZNF461

Expression for ZNF461 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF461 Gene

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF461 Gene



NURSA nuclear receptor signaling pathways regulating expression of ZNF461 Gene:

ZNF461

SOURCE GeneReport for Unigene cluster for ZNF461 Gene:

Hs.590972

mRNA Expression by UniProt/SwissProt for ZNF461 Gene:

Q8TAF7-ZN461_HUMAN
Tissue specificity: Widely expressed, with highest levels in liver, kidney, pancreas, thymus, and small intestine.
genes like me logo Genes that share expression patterns with ZNF461: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues and Protein tissue co-expression partners for ZNF461 Gene

Orthologs for ZNF461 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF461 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF461 34
  • 99.75 (n)
-- 35
  • 54 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia ZNF461 34 35
  • 81.79 (n)
Species where no ortholog for ZNF461 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF461 Gene

ENSEMBL:
Gene Tree for ZNF461 (if available)
TreeFam:
Gene Tree for ZNF461 (if available)

Paralogs for ZNF461 Gene

(550) SIMAP similar genes for ZNF461 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with ZNF461: view

Variants for ZNF461 Gene

Sequence variations from dbSNP and Humsavar for ZNF461 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10402486 -- 36,645,854(+) aactc(A/G)gctaa intron-variant, upstream-variant-2KB
rs10406014 -- 36,646,102(+) ttgtt(A/G)ttgtt intron-variant, upstream-variant-2KB
rs10407919 -- 36,655,397(+) aggtc(A/G)agacc intron-variant
rs10409123 -- 36,655,244(+) TCCCA(C/T)CTGAG intron-variant
rs10412527 -- 36,640,001(+) TATCC(C/G)TTTTT reference, missense, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for ZNF461 Gene

Variant ID Type Subtype PubMed ID
dgv660e214 CNV loss 21293372
esv34384 CNV loss 17911159
nsv1061250 CNV gain 25217958
nsv1064851 CNV loss 25217958
nsv2475 CNV insertion 18451855
nsv469794 CNV loss 16826518
nsv817833 CNV loss 17921354
nsv833817 CNV loss 17160897

Variation tolerance for ZNF461 Gene

Residual Variation Intolerance Score: 82.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.79; 58.26% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF461 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF461

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF461 Gene

Disorders for ZNF461 Gene

Relevant External Links for ZNF461

Genetic Association Database (GAD)
ZNF461
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF461

No disorders were found for ZNF461 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF461 Gene

Publications for ZNF461 Gene

  1. Characterization of two novel KRAB-domain-containing zinc finger genes, ZNF460 and ZNF461, on human chromosome 19q13.1-q13.4. (PMID: 15004467) Dai J. … Mao Y. (Cytogenet. Genome Res. 2003) 2 3 4 22 64
  2. Cloning and characterization of gonadotropin-inducible ovarian transcription factors (GIOT1 and -2) that are novel members of the (Cys)(2)-(His)(2)-type zinc finger protein family. (PMID: 11579202) Mizutani T. … Miyamoto K. (Mol. Endocrinol. 2001) 2 3 22 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  5. Mono-(2-ethylhexyl) phthalate induces NR4A subfamily and GIOT-1 gene expression, and suppresses CYP19 expression in human granulosa-like tumor cell line KGN. (PMID: 19822197) Ohno S. … Nakajin S. (Toxicol. Lett. 2009) 22 64

Products for ZNF461 Gene

Sources for ZNF461 Gene

Content
Loading form....