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Aliases for ZNF385D Gene

Aliases for ZNF385D Gene

  • Zinc Finger Protein 385D 2 3 5
  • Zinc Finger Protein 659 2 3 4
  • ZNF659 3 4

External Ids for ZNF385D Gene

Previous HGNC Symbols for ZNF385D Gene

  • ZNF659

Previous GeneCards Identifiers for ZNF385D Gene

  • GC03M021439
  • GC03M021412

Summaries for ZNF385D Gene

GeneCards Summary for ZNF385D Gene

ZNF385D (Zinc Finger Protein 385D) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZNF385B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF385D Gene

Genomics for ZNF385D Gene

Regulatory Elements for ZNF385D Gene

Enhancers for ZNF385D Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F022450 0.5 ENCODE 11.1 -77.8 -77846 1.5 ZNF316 JUND SMARCA4 MAFK RAD21 ZNF385D GC03P022382 GC03P022586
GH03F021839 1 ENCODE 8.7 +533.7 533717 1.0 CTCF ZNF316 SMARCA4 JUN TEAD4 FOXP2 NR2F6 RAD21 NR2F2 ZNF385D ZNF385D-AS2 PIR55547
GH03F021856 0.4 FANTOM5 6.6 +516.4 516445 0.2 ZNF385D ZNF385D-AS2 PIR55547
GH03F021393 0.7 ENCODE 5.2 +979.4 979391 1.5 JUND FOS ZNF385D VENTXP7 PIR40083
GH03F021714 0.3 FANTOM5 3.6 +659.0 659027 0.4 ZNF385D PIR55547 ZNF385D-AS2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF385D on UCSC Golden Path with GeneCards custom track

Promoters for ZNF385D Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001845890 721 401 SUZ12 EZH2

Genomic Location for ZNF385D Gene

Chromosome:
3
Start:
21,412,222 bp from pter
End:
22,373,321 bp from pter
Size:
961,100 bases
Orientation:
Minus strand

Genomic View for ZNF385D Gene

Genes around ZNF385D on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF385D Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF385D Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF385D Gene

Proteins for ZNF385D Gene

  • Protein details for ZNF385D Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H6B1-Z385D_HUMAN
    Recommended name:
    Zinc finger protein 385D
    Protein Accession:
    Q9H6B1

    Protein attributes for ZNF385D Gene

    Size:
    395 amino acids
    Molecular mass:
    42296 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF385D Gene

Post-translational modifications for ZNF385D Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF385D Gene

Domains & Families for ZNF385D Gene

Protein Domains for ZNF385D Gene

Suggested Antigen Peptide Sequences for ZNF385D Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9H6B1

UniProtKB/Swiss-Prot:

Z385D_HUMAN :
  • Contains 3 matrin-type zinc fingers.
Similarity:
  • Contains 3 matrin-type zinc fingers.
genes like me logo Genes that share domains with ZNF385D: view

No data available for Gene Families for ZNF385D Gene

Function for ZNF385D Gene

Gene Ontology (GO) - Molecular Function for ZNF385D Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002039 p53 binding IBA --
GO:0003676 nucleic acid binding IEA --
GO:0003723 RNA binding IBA --
GO:0008270 zinc ion binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF385D: view

Phenotypes for ZNF385D Gene

genes like me logo Genes that share phenotypes with ZNF385D: view

Animal Model Products

Inhibitory RNA Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF385D Gene

Localization for ZNF385D Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF385D Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF385D Gene COMPARTMENTS Subcellular localization image for ZNF385D gene
Compartment Confidence
nucleus 3
golgi apparatus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ZNF385D Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF385D: view

Pathways & Interactions for ZNF385D Gene

SuperPathways for ZNF385D Gene

No Data Available

Interacting Proteins for ZNF385D Gene

Selected Interacting proteins: Q9H6B1-Z385D_HUMAN for ZNF385D Gene via IID

Symbol External ID(s) Details
MAP2K2
SENP1

Gene Ontology (GO) - Biological Process for ZNF385D Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IBA --
genes like me logo Genes that share ontologies with ZNF385D: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF385D Gene

Transcripts for ZNF385D Gene

Unigene Clusters for ZNF385D Gene

Zinc finger protein 385D:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF385D Gene

No ASD Table

Relevant External Links for ZNF385D Gene

GeneLoc Exon Structure for
ZNF385D
ECgene alternative splicing isoforms for
ZNF385D

Expression for ZNF385D Gene

mRNA expression in normal human tissues for ZNF385D Gene

mRNA differential expression in normal tissues according to GTEx for ZNF385D Gene

This gene is overexpressed in Artery - Aorta (x6.6).

Protein differential expression in normal tissues from HIPED for ZNF385D Gene

This gene is overexpressed in Vitreous humor (68.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZNF385D Gene



Protein tissue co-expression partners for ZNF385D Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF385D Gene:

ZNF385D

SOURCE GeneReport for Unigene cluster for ZNF385D Gene:

Hs.21026
genes like me logo Genes that share expression patterns with ZNF385D: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt for ZNF385D Gene

Orthologs for ZNF385D Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF385D Gene

Organism Taxonomy Gene Similarity Type Details
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 99 (a)
OneToMany
-- 35
  • 85 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia ZNF385D 34 35
  • 95.58 (n)
dog
(Canis familiaris)
Mammalia ZNF385D 34 35
  • 94.49 (n)
oppossum
(Monodelphis domestica)
Mammalia ZNF385D 35
  • 90 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp385d 34
  • 87.79 (n)
cow
(Bos Taurus)
Mammalia ZNF385D 34
  • 84.99 (n)
chicken
(Gallus gallus)
Aves ZNF385D 34 35
  • 88.86 (n)
lizard
(Anolis carolinensis)
Reptilia ZNF385D 35
  • 84 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia znf385d 34
  • 76.36 (n)
zebrafish
(Danio rerio)
Actinopterygii ZNF385D 35
  • 51 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 17 (a)
OneToMany
Species where no ortholog for ZNF385D was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF385D Gene

ENSEMBL:
Gene Tree for ZNF385D (if available)
TreeFam:
Gene Tree for ZNF385D (if available)

Paralogs for ZNF385D Gene

Paralogs for ZNF385D Gene

(4) SIMAP similar genes for ZNF385D Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with ZNF385D: view

Variants for ZNF385D Gene

Sequence variations from dbSNP and Humsavar for ZNF385D Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
VAR_036058 A colorectal cancer sample
VAR_036059 A colorectal cancer sample
rs10049230 -- 21,569,200(+) CTAAG(C/T)CTCTT intron-variant
rs10049378 -- 22,136,066(+) gggat(C/G)taaga intron-variant
rs1007092 -- 21,538,304(-) CAATA(C/T)AGACT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF385D Gene

Variant ID Type Subtype PubMed ID
dgv4691n100 CNV gain 25217958
dgv799n67 CNV loss 20364138
dgv8258n54 CNV loss 21841781
dgv8259n54 CNV loss 21841781
dgv8260n54 CNV loss 21841781
dgv8261n54 CNV loss 21841781
dgv8262n54 CNV loss 21841781
dgv8263n54 CNV loss 21841781
esv21508 CNV gain 19812545
esv2657428 CNV deletion 23128226
esv2665339 CNV deletion 23128226
esv2668952 CNV deletion 23128226
esv2725024 CNV deletion 23290073
esv2725025 CNV deletion 23290073
esv2725026 CNV deletion 23290073
esv2751992 CNV gain 17911159
esv28084 CNV loss 19812545
esv3306835 CNV mobile element insertion 20981092
esv3374441 CNV insertion 20981092
esv3385081 CNV insertion 20981092
esv3561580 CNV deletion 23714750
esv3568639 CNV loss 25503493
esv3595512 CNV loss 21293372
esv3595513 CNV loss 21293372
esv3595514 CNV loss 21293372
esv3595515 CNV loss 21293372
esv3595516 CNV loss 21293372
esv3595517 CNV loss 21293372
esv3595518 CNV loss 21293372
esv5738 CNV loss 19470904
nsv1003451 CNV loss 25217958
nsv1006471 CNV gain 25217958
nsv1007665 CNV gain 25217958
nsv1010460 CNV loss 25217958
nsv1011226 CNV loss 25217958
nsv1114363 CNV deletion 24896259
nsv1117330 CNV tandem duplication 24896259
nsv238000 CNV deletion 16902084
nsv514140 CNV loss 21397061
nsv522577 CNV loss 19592680
nsv527771 CNV loss 19592680
nsv589895 CNV loss 21841781
nsv589896 CNV loss 21841781
nsv589897 CNV loss 21841781
nsv589923 CNV loss 21841781
nsv822029 CNV gain 20364138
nsv834630 CNV loss 17160897
nsv834631 CNV gain 17160897
nsv963302 CNV duplication 23825009
nsv979810 CNV duplication 23825009
nsv997373 CNV loss 25217958
nsv997790 CNV loss 25217958

Variation tolerance for ZNF385D Gene

Residual Variation Intolerance Score: 29.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.09; 61.00% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF385D Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF385D

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF385D Gene

Disorders for ZNF385D Gene

Relevant External Links for ZNF385D

Genetic Association Database (GAD)
ZNF385D
Human Genome Epidemiology (HuGE) Navigator
ZNF385D
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF385D

No disorders were found for ZNF385D Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF385D Gene

Publications for ZNF385D Gene

  1. Host determinants of HIV-1 control in African Americans. (PMID: 20205591) Pelak K. … . (J. Infect. Dis. 2010) 3 46 64
  2. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  3. Common genetic variation and susceptibility to partial epilepsies: a genome-wide association study. (PMID: 20522523) KasperaviciAte D. … Sisodiya S.M. (Brain 2010) 3 46 64
  4. Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder. (PMID: 18711365) Ferreira M.A. … Craddock N. (Nat. Genet. 2008) 3 46 64
  5. Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. (PMID: 18821565) Lasky-Su J. … Faraone S.V. (Am. J. Med. Genet. B Neuropsychiatr. Genet. 2008) 3 46 64

Products for ZNF385D Gene

Sources for ZNF385D Gene

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