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Aliases for ZNF350-AS1 Gene

Subcategory (RNA class) for ZNF350-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZNF350-AS1 Gene

  • ZNF350 Antisense RNA 1 2 3 5
  • Hepatocellular Carcinoma Associated Transcript 3 (Non-Protein Coding) 2 3
  • CTC-429C10.4 3
  • Uc002pyc 3
  • HCCAT3 3

External Ids for ZNF350-AS1 Gene

Previous HGNC Symbols for ZNF350-AS1 Gene

  • HCCAT3

Summaries for ZNF350-AS1 Gene

GeneCards Summary for ZNF350-AS1 Gene

ZNF350-AS1 (ZNF350 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF350-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF350-AS1 Gene

Genomics for ZNF350-AS1 Gene

Regulatory Elements for ZNF350-AS1 Gene

Enhancers for ZNF350-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H051903 1.3 ENCODE dbSUPER 17.2 -43.9 -43908 4.3 HDGF FOXA2 ARNT SIN3A ARID4B DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZNF350-AS1 ZNF577 ZNF350 ZNF615 FPR3 SIGLEC5 ZNF649 ZNF616 LOC100419707
GH19H051926 1.1 ENCODE 15.6 -21.8 -21803 1.8 PKNOX1 ARID4B FEZF1 DMAP1 ZNF2 YY1 SLC30A9 ZNF766 ZNF143 ZNF207 ZNF613 ZNF611 ZNF577 ZNF137P ZNF841 ZNF350-AS1 ENSG00000268970 ZNF701 ZNF28 ENSG00000269483
GH19H051960 0.9 ENCODE 11.8 +11.7 11739 1.7 HDAC1 FOXA2 ARID4B DMAP1 TCF12 ZNF766 ELK1 CREM ZEB2 PPARG ZNF350-AS1 ZNF613 ZNF350 ZNF432 ZNF615 ZNF841
GH19H051907 0.5 ENCODE dbSUPER 12.3 -41.1 -41123 0.6 ZNF350-AS1 ZNF350 ZNF615 FPR3 ZNF577 ZNF616 ZNF649 LOC100419707
GH19H052094 1 ENCODE 5.9 +146.2 146204 2.3 ATF1 ARID4B SIN3A GLIS2 SP3 MXD4 NCOA1 ZNF518A KAT8 MBD2 ZNF613 ZNF137P ZNF841 ENSG00000268970 ZNF701 ZNF611 ZNF28 ZNF578 ZNF816 ENSG00000269825
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF350-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF350-AS1 Gene

Genomic Locations for ZNF350-AS1 Gene
32,234 bases
Plus strand

Genomic View for ZNF350-AS1 Gene

Genes around ZNF350-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF350-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF350-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF350-AS1 Gene

Proteins for ZNF350-AS1 Gene

Post-translational modifications for ZNF350-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF350-AS1 Gene

Domains & Families for ZNF350-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF350-AS1 Gene

Function for ZNF350-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF350-AS1 Gene

Localization for ZNF350-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF350-AS1 Gene

Pathways & Interactions for ZNF350-AS1 Gene

SuperPathways for ZNF350-AS1 Gene

No Data Available

Interacting Proteins for ZNF350-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF350-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZNF350-AS1 Gene

Drugs & Compounds for ZNF350-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF350-AS1 Gene

mRNA/cDNA for ZNF350-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF350-AS1 Gene

No ASD Table

Relevant External Links for ZNF350-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNF350-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF350-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF350-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF350-AS1 Gene

Orthologs for ZNF350-AS1 Gene

Evolution for ZNF350-AS1 Gene

Gene Tree for ZNF350-AS1 (if available)
Gene Tree for ZNF350-AS1 (if available)

No data available for Orthologs for ZNF350-AS1 Gene

Paralogs for ZNF350-AS1 Gene

No data available for Paralogs for ZNF350-AS1 Gene

Variants for ZNF350-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF350-AS1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000015884 -- 51,950,682(+) TTATG(G/T)TTACA intron-variant
rs1000016345 -- 51,963,118(+) ATCCC(A/G)GGAGG intron-variant
rs1000077684 -- 51,957,052(+) GTAGG(G/T)TGATT intron-variant
rs1000099533 -- 51,971,005(+) TTTAG(A/G)ACTGA intron-variant
rs1000301240 -- 51,981,362(+) TCCCA(A/T)ATATA intron-variant, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF350-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv833872 CNV loss 17160897
nsv580006 CNV loss 21841781
nsv580001 CNV gain 21841781
nsv525259 CNV loss 19592680
nsv1140251 OTHER inversion 24896259
nsv1125524 CNV deletion 24896259
esv3644680 CNV gain 21293372
esv2758767 CNV gain+loss 17122850
esv2718779 CNV deletion 23290073
esv2242567 CNV deletion 18987734
dgv6523n54 CNV gain 21841781
dgv425n27 CNV gain 19166990
dgv3626n100 CNV gain 25217958
dgv143e55 CNV gain 17911159
dgv1067e212 CNV gain 25503493

Relevant External Links for ZNF350-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF350-AS1 Gene

Disorders for ZNF350-AS1 Gene

Relevant External Links for ZNF350-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ZNF350-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF350-AS1 Gene

Publications for ZNF350-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for ZNF350-AS1 Gene

Sources for ZNF350-AS1 Gene

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