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Aliases for ZNF347 Gene

Aliases for ZNF347 Gene

  • Zinc Finger Protein 347 2 3
  • Zinc Finger Protein 1111 3 4
  • ZNF1111 3 4
  • Zinc Finger 1111 3

External Ids for ZNF347 Gene

Previous GeneCards Identifiers for ZNF347 Gene

  • GC19M054273
  • GC19M054002
  • GC19M058085
  • GC19M058103
  • GC19M058261
  • GC19M058334
  • GC19M053642
  • GC19M049965
  • GC19M053627

Summaries for ZNF347 Gene

GeneCards Summary for ZNF347 Gene

ZNF347 (Zinc Finger Protein 347) is a Protein Coding gene. Diseases associated with ZNF347 include chikungunya. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF268.

UniProtKB/Swiss-Prot for ZNF347 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF347 Gene

Genomics for ZNF347 Gene

Regulatory Elements for ZNF347 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for ZNF347 Gene

Start:
53,124,072 bp from pter
End:
53,159,075 bp from pter
Size:
35,004 bases
Orientation:
Minus strand

Genomic View for ZNF347 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF347 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF347 Gene

Proteins for ZNF347 Gene

  • Protein details for ZNF347 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96SE7-ZN347_HUMAN
    Recommended name:
    Zinc finger protein 347
    Protein Accession:
    Q96SE7
    Secondary Accessions:
    • B3KU77
    • B9EG59
    • G5E9N4
    • Q8TCN1

    Protein attributes for ZNF347 Gene

    Size:
    839 amino acids
    Molecular mass:
    95770 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for ZNF347 Gene

    Alternative splice isoforms for ZNF347 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF347 Gene

Proteomics data for ZNF347 Gene at MOPED

Post-translational modifications for ZNF347 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF347 Gene

No data available for DME Specific Peptides for ZNF347 Gene

Domains for ZNF347 Gene

Gene Families for ZNF347 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Suggested Antigen Peptide Sequences for ZNF347 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q96SE7

UniProtKB/Swiss-Prot:

ZN347_HUMAN :
  • Q96SE7
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 20 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF347: view

Function for ZNF347 Gene

Molecular function for ZNF347 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF347 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF347: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF347 Gene

Localization for ZNF347 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF347 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF347 Gene COMPARTMENTS Subcellular localization image for ZNF347 gene
Compartment Confidence
nucleus 4
cytosol 2
cytoskeleton 1

Gene Ontology (GO) - Cellular Components for ZNF347 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF347: view

Pathways for ZNF347 Gene

SuperPathways for ZNF347 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF347: view

Pathways by source for ZNF347 Gene

2 Reactome pathways for ZNF347 Gene

Gene Ontology (GO) - Biological Process for ZNF347 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF347: view

Transcripts for ZNF347 Gene

Unigene Clusters for ZNF347 Gene

Zinc finger protein 347:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF347

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ZNF347
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF347 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c · 4d · 4e ^ 5a · 5b ^ 6a · 6b · 6c
SP1: - - -
SP2: - -
SP3: - - -
SP4: - -
SP5: - -

Relevant External Links for ZNF347 Gene

GeneLoc Exon Structure for
ZNF347
ECgene alternative splicing isoforms for
ZNF347

Expression for ZNF347 Gene

mRNA expression in normal human tissues for ZNF347 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF347 Gene

SOURCE GeneReport for Unigene cluster for ZNF347 Gene Hs.467239

genes like me logo Genes that share expressions with ZNF347: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF347 Gene

Orthologs for ZNF347 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF347 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 53 (a)
ManyToMany
ZNF347 35
  • 99.4 (n)
  • 98.93 (a)
cow
(Bos Taurus)
Mammalia -- 36
  • 50 (a)
ManyToMany
-- 36
  • 44 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Zfp51 16
Zfp51 36
  • 41 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG8484 37
  • 27 (a)
crol 37
  • 40 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 38 (a)
ManyToMany
-- 36
  • 33 (a)
ManyToMany
-- 36
  • 43 (a)
ManyToMany
-- 36
  • 36 (a)
ManyToMany
-- 36
  • 39 (a)
ManyToMany
CSA.1668 36
  • 35 (a)
ManyToMany
Species with no ortholog for ZNF347:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF347 Gene

ENSEMBL:
Gene Tree for ZNF347 (if available)
TreeFam:
Gene Tree for ZNF347 (if available)

Paralogs for ZNF347 Gene

Selected SIMAP similar genes for ZNF347 Gene using alignment to 5 proteins:

Pseudogenes.org Pseudogenes for ZNF347 Gene

genes like me logo Genes that share paralogs with ZNF347: view

Variants for ZNF347 Gene

Sequence variations from dbSNP and Humsavar for ZNF347 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs984871 -- 53,139,647(+) ATCAA(A/G)GAACT utr-variant-3-prime
rs1055346 -- 53,138,831(+) TTTTT(A/G)GCAAA utr-variant-3-prime
rs1055349 -- 53,138,822(+) GTTGA(A/T)TTTTT utr-variant-3-prime
rs1650972 -- 53,140,244(-) ACAAC(A/G)TCAGA utr-variant-3-prime
rs1661933 -- 53,138,649(+) TTACA(G/T)TTTCC intron-variant, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for ZNF347 Gene

Variant ID Type Subtype PubMed ID
esv2718787 CNV Deletion 23290073
dgv1116e1 CNV Complex 17122850
nsv428370 CNV Loss 18775914
nsv912342 CNV Gain 21882294
nsv912350 CNV Gain 21882294
nsv912351 CNV Loss 21882294

Relevant External Links for ZNF347 Gene

HapMap Linkage Disequilibrium report
ZNF347
Human Gene Mutation Database (HGMD)
ZNF347

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF347 Gene

Disorders for ZNF347 Gene

MalaCards: The human disease database

MalaCards: The human disease database. (1) Diseases for ZNF347 Gene including...

Search for ZNF347 Gene in MalaCards »

(1) University of Copenhagen DISEASES for ZNF347 Gene

genes like me logo Genes that share disorders with ZNF347: view

No data available for UniProtKB/Swiss-Prot for ZNF347 Gene

Publications for ZNF347 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3
  4. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. (PMID: 22505724) Udeshi N.D. … Carr S.A. (Mol. Cell Proteomics 2012) 3
  5. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 4

Products for ZNF347 Gene

Sources for ZNF347 Gene

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