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Aliases for ZNF346-IT1 Gene

Subcategory (RNA class) for ZNF346-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZNF346-IT1 Gene

  • ZNF346 Intronic Transcript 1 2 3 5
  • ZNF346 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ZNF346-IT1 Gene

Previous GeneCards Identifiers for ZNF346-IT1 Gene

  • GC00U933169
  • GC05P176479

Summaries for ZNF346-IT1 Gene

GeneCards Summary for ZNF346-IT1 Gene

ZNF346-IT1 (ZNF346 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF346-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF346-IT1 Gene

Genomics for ZNF346-IT1 Gene

Regulatory Elements for ZNF346-IT1 Gene

Enhancers for ZNF346-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05H177402 1.4 ENCODE dbSUPER 51.5 +351.9 351941 3.1 HDGF ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 CBX5 ZNF143 ZNF207 ZNF346 ENSG00000247679 LOC202181 FAF2 ZNF346-IT1 NSD1 ENSG00000248484 UIMC1 LOC105377752 OR1X5P
GH05H177453 1.7 Ensembl ENCODE dbSUPER 33.7 +405.2 405151 6.9 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF346 NSD1 ZNF346-IT1 LOC202181 UIMC1 ENSG00000247679 SLC34A1 F12 GRK6 PFN3
GH05H176539 1.9 FANTOM5 Ensembl ENCODE dbSUPER 20.8 -505.9 -505930 11.8 HDGF FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF766 FAF2 NSD1 ENSG00000250909 ENSG00000251414 ZNF346-IT1 ZNF346 CDHR2 RNF44 UIMC1 CLTB
GH05H177004 1.1 ENCODE 30.8 -45.5 -45493 2.7 ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 SP3 FAF2 NSD1 ENSG00000250909 ENSG00000251414 ENSG00000247679 FAM193B ZNF346 LOC202181 ZNF346-IT1 UIMC1
GH05H177425 1.8 FANTOM5 ENCODE dbSUPER 15.5 +377.7 377658 8.6 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF766 CBX5 NSD1 GRK6 FAF2 UIMC1 DOK3 ENSG00000247679 LOC202181 ZNF346-IT1 PFN3 FAM193B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF346-IT1 Gene

Genomic Locations for ZNF346-IT1 Gene
1,250 bases
Plus strand

Genomic View for ZNF346-IT1 Gene

Genes around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF346-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF346-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZNF346-IT1 Gene

Proteins for ZNF346-IT1 Gene

Post-translational modifications for ZNF346-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF346-IT1 Gene

Domains & Families for ZNF346-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF346-IT1 Gene

Function for ZNF346-IT1 Gene

Phenotypes From GWAS Catalog for ZNF346-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF346-IT1 Gene

Localization for ZNF346-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF346-IT1 Gene

Pathways & Interactions for ZNF346-IT1 Gene

SuperPathways for ZNF346-IT1 Gene

No Data Available

Interacting Proteins for ZNF346-IT1 Gene

Gene Ontology (GO) - Biological Process for ZNF346-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZNF346-IT1 Gene

Drugs & Compounds for ZNF346-IT1 Gene

No Compound Related Data Available

Transcripts for ZNF346-IT1 Gene

mRNA/cDNA for ZNF346-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF346-IT1 Gene

No ASD Table

Relevant External Links for ZNF346-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNF346-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF346-IT1 Gene

genes like me logo Genes that share expression patterns with ZNF346-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF346-IT1 Gene

Orthologs for ZNF346-IT1 Gene

Evolution for ZNF346-IT1 Gene

Gene Tree for ZNF346-IT1 (if available)
Gene Tree for ZNF346-IT1 (if available)

No data available for Orthologs for ZNF346-IT1 Gene

Paralogs for ZNF346-IT1 Gene

No data available for Paralogs for ZNF346-IT1 Gene

Variants for ZNF346-IT1 Gene

Relevant External Links for ZNF346-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF346-IT1 Gene

Disorders for ZNF346-IT1 Gene

No disorders were found for ZNF346-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF346-IT1 Gene

Publications for ZNF346-IT1 Gene

No publications were found for ZNF346-IT1 Gene.

Products for ZNF346-IT1 Gene

Sources for ZNF346-IT1 Gene

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