Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF346-IT1 Gene

Subcategory (RNA class) for ZNF346-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF346-IT1 Gene

  • ZNF346 Intronic Transcript 1 2 3 5
  • ZNF346 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ZNF346-IT1 Gene

Previous GeneCards Identifiers for ZNF346-IT1 Gene

  • GC00U933169
  • GC05P176479

Summaries for ZNF346-IT1 Gene

GeneCards Summary for ZNF346-IT1 Gene

ZNF346-IT1 (ZNF346 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF346-IT1 Gene

Genomics for ZNF346-IT1 Gene

Regulatory Elements for ZNF346-IT1 Gene

Enhancers for ZNF346-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G177402 1.4 ENCODE dbSUPER 32.6 +351.9 351941 3.1 HDGF CREB3L1 AGO1 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 CBX5 ZNF346 LOC202181 ENSG00000247679 ZNF346-IT1 FAF2 SUDS3P1 F12 GRK6
GH05G176132 1.2 Ensembl ENCODE 37.2 -917.7 -917664 3.4 ZNF493 ZFP64 ZNF121 ZNF138 ZNF354C SCRT2 KLF7 ZNF202 ZNF654 ZBTB11 FAM153B ENSG00000251414 ZNF346-IT1 ENSG00000250909 FAF2 ZNF346 BRCC3P1 EIF4E1B ENSG00000251623 ENSG00000251458
GH05G177453 1.7 Ensembl ENCODE dbSUPER 23.3 +405.2 405151 6.9 HDGF PKNOX1 MLX ARNT CREB3L1 AGO1 ZFP64 ARID4B SIN3A DMAP1 ZNF346 ZNF346-IT1 SLC34A1 F12 GRK6 PFN3 MXD3 LOC202181 B4GALT7 PRR7
GH05G176529 1.8 FANTOM5 ENCODE dbSUPER 13.8 -517.4 -517415 10.3 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF346 ZNF346-IT1 RNF44 FAF2 UIMC1 CDHR2 THOC3 CLTB HK3 BRCC3P1
GH05G176890 0.9 dbSUPER 24.1 -158.8 -158800 4.2 ZFP64 RAD21 ZNF121 ZNF366 ZNF138 ZNF354C KLF7 ZNF202 ZNF680 ZNF654 LOC202181 ENSG00000247679 FAF2 ENSG00000251414 ENSG00000250909 ZNF346-IT1 RPL21P60 FGFR4 BRCC3P1 PRMT1P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF346-IT1 Gene

Chromosome:
5
Start:
177,051,714 bp from pter
End:
177,052,963 bp from pter
Size:
1,250 bases
Orientation:
Plus strand

Genomic View for ZNF346-IT1 Gene

Genes around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF346-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF346-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZNF346-IT1 Gene

Proteins for ZNF346-IT1 Gene

Post-translational modifications for ZNF346-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF346-IT1 Gene

Domains & Families for ZNF346-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF346-IT1 Gene

Function for ZNF346-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF346-IT1 Gene

Localization for ZNF346-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF346-IT1 Gene

Pathways & Interactions for ZNF346-IT1 Gene

SuperPathways for ZNF346-IT1 Gene

No Data Available

Interacting Proteins for ZNF346-IT1 Gene

Gene Ontology (GO) - Biological Process for ZNF346-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF346-IT1 Gene

Drugs & Compounds for ZNF346-IT1 Gene

No Compound Related Data Available

Transcripts for ZNF346-IT1 Gene

mRNA/cDNA for ZNF346-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF346-IT1 Gene

No ASD Table

Relevant External Links for ZNF346-IT1 Gene

GeneLoc Exon Structure for
ZNF346-IT1
ECgene alternative splicing isoforms for
ZNF346-IT1

Expression for ZNF346-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF346-IT1 Gene

genes like me logo Genes that share expression patterns with ZNF346-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF346-IT1 Gene

Orthologs for ZNF346-IT1 Gene

Evolution for ZNF346-IT1 Gene

ENSEMBL:
Gene Tree for ZNF346-IT1 (if available)
TreeFam:
Gene Tree for ZNF346-IT1 (if available)

No data available for Orthologs for ZNF346-IT1 Gene

Paralogs for ZNF346-IT1 Gene

No data available for Paralogs for ZNF346-IT1 Gene

Variants for ZNF346-IT1 Gene

Relevant External Links for ZNF346-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF346-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF346-IT1 Gene

Disorders for ZNF346-IT1 Gene

No disorders were found for ZNF346-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF346-IT1 Gene

Publications for ZNF346-IT1 Gene

No publications were found for ZNF346-IT1 Gene.

Products for ZNF346-IT1 Gene

Sources for ZNF346-IT1 Gene

Content
Loading form....