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Aliases for ZNF346-IT1 Gene

Subcategory (RNA class) for ZNF346-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZNF346-IT1 Gene

  • ZNF346 Intronic Transcript 1 2 3 5
  • ZNF346 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for ZNF346-IT1 Gene

Previous GeneCards Identifiers for ZNF346-IT1 Gene

  • GC00U933169
  • GC05P176479

Summaries for ZNF346-IT1 Gene

GeneCards Summary for ZNF346-IT1 Gene

ZNF346-IT1 (ZNF346 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF346-IT1 Gene

Genomics for ZNF346-IT1 Gene

Regulatory Elements for ZNF346-IT1 Gene

Enhancers for ZNF346-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F176132 1.1 Ensembl ENCODE 46.8 -917.7 -917664 3.4 ZNF493 ZFP64 ZNF121 ZNF354C ZNF138 SCRT2 KLF7 ZNF202 ZNF654 ZBTB11 ENSG00000251414 ENSG00000250909 FAF2 FAM153B ZNF346-IT1 ZNF346 EIF4E1B ENSG00000251458 LOC105377748
GH05F177021 1.2 ENCODE 34.7 -29.2 -29174 2.7 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF416 FAF2 ENSG00000250909 ENSG00000251414 ENSG00000247679 ZNF346 LOC202181 ZNF346-IT1 RPL21P60 B4GALT7 PRMT1P1
GH05F177837 0.9 Ensembl 32.6 +785.9 785892 0.4 ZFP64 ZNF302 ZNF138 ZNF354C ZNF366 KLF7 FOS ZNF202 ZNF680 ZNF654 ENSG00000247679 LOC202181 ZNF346-IT1 RPL21P60 ZNF346 CLK4 HNRNPAB B4GALT7 SUDS3P1 PRMT1P1
GH05F176837 1.1 ENCODE 24.2 -213.9 -213900 0.2 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF143 DEK ZNF346 ZNF346-IT1 FAF2 ENSG00000247679 LOC202181 GRK6 ENSG00000248996 DOK3 UNC5A GC05M176812
GH05F176529 1.8 FANTOM5 Ensembl ENCODE 13.8 -517.4 -517415 10.3 PKNOX1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF207 FOS ZNF346 ZNF346-IT1 RNF44 FAF2 UIMC1 CDHR2 THOC3 CLTB HK3 BRCC3P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF346-IT1 Gene

177,051,714 bp from pter
177,052,963 bp from pter
1,250 bases
Plus strand

Genomic View for ZNF346-IT1 Gene

Genes around ZNF346-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF346-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF346-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZNF346-IT1 Gene

Proteins for ZNF346-IT1 Gene

Post-translational modifications for ZNF346-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF346-IT1 Gene

Domains & Families for ZNF346-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF346-IT1 Gene

Function for ZNF346-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF346-IT1 Gene

Localization for ZNF346-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF346-IT1 Gene

Pathways & Interactions for ZNF346-IT1 Gene

SuperPathways for ZNF346-IT1 Gene

No Data Available

Interacting Proteins for ZNF346-IT1 Gene

Gene Ontology (GO) - Biological Process for ZNF346-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZNF346-IT1 Gene

Transcripts for ZNF346-IT1 Gene

mRNA/cDNA for ZNF346-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF346-IT1 Gene

No ASD Table

Relevant External Links for ZNF346-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZNF346-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF346-IT1 Gene

genes like me logo Genes that share expression patterns with ZNF346-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF346-IT1 Gene

Orthologs for ZNF346-IT1 Gene

Evolution for ZNF346-IT1 Gene

Gene Tree for ZNF346-IT1 (if available)
Gene Tree for ZNF346-IT1 (if available)

No data available for Orthologs for ZNF346-IT1 Gene

Paralogs for ZNF346-IT1 Gene

No data available for Paralogs for ZNF346-IT1 Gene

Variants for ZNF346-IT1 Gene

Relevant External Links for ZNF346-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF346-IT1 Gene

Disorders for ZNF346-IT1 Gene

No disorders were found for ZNF346-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZNF346-IT1 Gene

Publications for ZNF346-IT1 Gene

No publications were found for ZNF346-IT1 Gene.

Products for ZNF346-IT1 Gene

Sources for ZNF346-IT1 Gene

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