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Aliases for ZNF341 Gene

Aliases for ZNF341 Gene

  • Zinc Finger Protein 341 2 3 5

External Ids for ZNF341 Gene

Previous GeneCards Identifiers for ZNF341 Gene

  • GC20P032087
  • GC20P032988
  • GC20P033035
  • GC20P031783
  • GC20P032319
  • GC20P029105

Summaries for ZNF341 Gene

GeneCards Summary for ZNF341 Gene

ZNF341 (Zinc Finger Protein 341) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding.

UniProtKB/Swiss-Prot for ZNF341 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF341 Gene

Genomics for ZNF341 Gene

Regulatory Elements for ZNF341 Gene

Enhancers for ZNF341 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F033892 0.2 ENCODE 14.7 +162.2 162224 2.1 ELF3 ARID4B KLF17 SIN3A DMAP1 ZSCAN9 DNMT3B ZNF48 GLIS2 FOS ZNF341 CHMP4B ZNF341-AS1 ENSG00000272945 ENSG00000229188 PXMP4 RALY-AS1 TPM3P2
GH20F033755 0.2 ENCODE 11.7 +24.6 24626 1.1 BCOR BHLHE40 HLF ZMYM3 CEBPB CEBPG HIC1 ZNF121 FOS ENSG00000229188 ZNF341 PXMP4 RPL31P2 GC20M033791
GH20F033773 0.2 ENCODE 11.7 +42.4 42417 1.5 BCOR TBP PKNOX1 ESRRA TBL1XR1 ZMYM3 MAX ZNF48 RELA ZNF143 ZNF341 ENSG00000229188 PXMP4 GC20M033791 RPL31P2
GH20F033775 0.2 ENCODE 11.7 +43.5 43473 0.2 JUNB TCF7 CREM ZNF341 ENSG00000229188 PXMP4 GC20M033791 RPL31P2
GH20F033687 0.6 ENCODE 11.6 -42.1 -42117 3.2 PKNOX1 ARNT MLX CREB3L1 ARID4B SIN3A YY1 ZNF143 ZNF207 FOS PXMP4 ZNF341 ENSG00000229188 ACTL10 C20orf144 CBFA2T2 SNTA1 EFCAB8 E2F1 GC20M033707
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZNF341 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF341 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000400008 643 1801 HDGF PKNOX1 ARID4B SIN3A YBX1 DMAP1 ZNF2 YY1 ZNF207 ZNF143

Genomic Location for ZNF341 Gene

Chromosome:
20
Start:
33,731,657 bp from pter
End:
33,792,269 bp from pter
Size:
60,613 bases
Orientation:
Plus strand

Genomic View for ZNF341 Gene

Genes around ZNF341 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF341 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF341 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF341 Gene

Proteins for ZNF341 Gene

  • Protein details for ZNF341 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BYN7-ZN341_HUMAN
    Recommended name:
    Zinc finger protein 341
    Protein Accession:
    Q9BYN7
    Secondary Accessions:
    • A2RUF4
    • B2RXE5
    • B7ZM09
    • Q5JXM8
    • Q96ST5

    Protein attributes for ZNF341 Gene

    Size:
    854 amino acids
    Molecular mass:
    92728 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB55193.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF341 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF341 Gene

Post-translational modifications for ZNF341 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF341 Gene

No data available for DME Specific Peptides for ZNF341 Gene

Domains & Families for ZNF341 Gene

Gene Families for ZNF341 Gene

Protein Domains for ZNF341 Gene

Suggested Antigen Peptide Sequences for ZNF341 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BYN7

UniProtKB/Swiss-Prot:

ZN341_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 12 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 12 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF341: view

Function for ZNF341 Gene

Molecular function for ZNF341 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF341 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA,IBA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF341: view

Phenotypes for ZNF341 Gene

genes like me logo Genes that share phenotypes with ZNF341: view

Animal Model Products

miRNA for ZNF341 Gene

miRTarBase miRNAs that target ZNF341

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF341 Gene

Localization for ZNF341 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF341 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF341 Gene COMPARTMENTS Subcellular localization image for ZNF341 gene
Compartment Confidence
nucleus 5
cytoskeleton 2
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF341 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA,IBA --
genes like me logo Genes that share ontologies with ZNF341: view

Pathways & Interactions for ZNF341 Gene

SuperPathways for ZNF341 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF341 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA,IBA --
genes like me logo Genes that share ontologies with ZNF341: view

No data available for Pathways by source and SIGNOR curated interactions for ZNF341 Gene

Transcripts for ZNF341 Gene

Unigene Clusters for ZNF341 Gene

Zinc finger protein 341:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF341 Gene

No ASD Table

Relevant External Links for ZNF341 Gene

GeneLoc Exon Structure for
ZNF341
ECgene alternative splicing isoforms for
ZNF341

Expression for ZNF341 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF341 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Protein differential expression in normal tissues from HIPED for ZNF341 Gene

This gene is overexpressed in Adipocyte (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF341 Gene



Protein tissue co-expression partners for ZNF341 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ZNF341 Gene:

ZNF341

SOURCE GeneReport for Unigene cluster for ZNF341 Gene:

Hs.516989
genes like me logo Genes that share expression patterns with ZNF341: view

Primer Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF341 Gene

Orthologs for ZNF341 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF341 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF341 34 35
  • 99.61 (n)
cow
(Bos Taurus)
Mammalia ZNF341 34 35
  • 90.52 (n)
dog
(Canis familiaris)
Mammalia ZNF341 34 35
  • 90.39 (n)
mouse
(Mus musculus)
Mammalia Zfp341 34 16 35
  • 86.26 (n)
rat
(Rattus norvegicus)
Mammalia Zfp966 34
  • 86.13 (n)
oppossum
(Monodelphis domestica)
Mammalia ZNF341 35
  • 80 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZNF341 35
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves ZNF341 34 35
  • 75.3 (n)
lizard
(Anolis carolinensis)
Reptilia ZNF341 35
  • 73 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia znf341 34
  • 64.3 (n)
zebrafish
(Danio rerio)
Actinopterygii znf341 34 35
  • 67.61 (n)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.1289 35
  • 30 (a)
OneToOne
Species where no ortholog for ZNF341 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF341 Gene

ENSEMBL:
Gene Tree for ZNF341 (if available)
TreeFam:
Gene Tree for ZNF341 (if available)

Paralogs for ZNF341 Gene

Pseudogenes.org Pseudogenes for ZNF341 Gene

genes like me logo Genes that share paralogs with ZNF341: view

No data available for Paralogs for ZNF341 Gene

Variants for ZNF341 Gene

Sequence variations from dbSNP and Humsavar for ZNF341 Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs368945563 Likely benign 33,791,116(+) TTTCC(C/T)GCCAC intron-variant, nc-transcript-variant, reference, missense
rs111320445 -- 33,776,316(+) TCAAA(C/T)TCCTG intron-variant
rs111331389 -- 33,737,464(+) CTGCA(A/G)GCACC intron-variant
rs111364136 -- 33,730,892(+) GCCTC(A/G)GCCTC upstream-variant-2KB
rs111406396 -- 33,731,890(+) GGTTG(A/C/G)GTTTC nc-transcript-variant, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for ZNF341 Gene

Variant ID Type Subtype PubMed ID
dgv2242n106 CNV deletion 24896259
esv2659244 CNV deletion 23128226
esv2676051 CNV deletion 23128226
esv3575370 CNV gain 25503493
nsv1065189 CNV loss 25217958
nsv1072535 CNV deletion 25765185
nsv180563 CNV deletion 16902084
nsv3353 CNV deletion 18451855
nsv3355 CNV insertion 18451855
nsv458965 CNV gain 19166990
nsv470548 CNV gain 18288195
nsv518926 CNV gain 19592680
nsv585930 CNV gain 21841781
nsv828714 CNV loss 20364138
nsv833961 CNV loss 17160897
nsv962572 CNV duplication 23825009

Variation tolerance for ZNF341 Gene

Residual Variation Intolerance Score: 54.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.72; 57.53% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF341 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF341

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF341 Gene

Disorders for ZNF341 Gene

Relevant External Links for ZNF341

Genetic Association Database (GAD)
ZNF341
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF341

No disorders were found for ZNF341 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF341 Gene

Publications for ZNF341 Gene

  1. Hundreds of variants clustered in genomic loci and biological pathways affect human height. (PMID: 20881960) Lango Allen H. … Hirschhorn J.N. (Nature 2010) 3 46 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4 64
  4. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. (PMID: 24705354) Butland S.L. … Hayden M.R. (Hum. Mol. Genet. 2014) 3 64
  5. Protein interaction network of alternatively spliced isoforms from brain links genetic risk factors for autism. (PMID: 24722188) Corominas R. … Iakoucheva L.M. (Nat. Commun. 2014) 3 64

Products for ZNF341 Gene

Sources for ZNF341 Gene

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