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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

ZNF32 Gene

protein-coding GIFtS: 52
GCID: GC10M044139

zinc finger protein 32

(Previous name: zinc finger protein 32 (KOX 30) )

Explore 5 diseases affiliated with
ZNF32 via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
Zinc Finger Protein 32¹ ²
KOX30¹ ² ³ ⁵
Zinc Finger Protein 32 (KOX 30)¹ ²
Zinc Finger Protein KOX30² ³
C2H2-546² ³

External Ids:	HGNC: 13095¹	Entrez Gene: 7580²	Ensembl: ENSG00000169740⁷	OMIM: 194539⁵	UniProtKB: P17041³

Export aliases for ZNF32 gene to outside databases

Previous GC identifers: GC10M043428 GC10M043607 GC10M043914 GC10M043423 GC10M043338 GC10M043459 GC10M040666

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: ZNF32_HUMAN, P17041

Function: May be involved in transcriptional regulation

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000010.10 NC_018921.1 NT_033985.7

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the ZNF32 gene promoter:
FOXO4 LyF-1 HNF-3beta LCR-F1 C/EBPalpha
Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: ZNF32 promoter sequence

Search SABiosciences Chromatin IP Primers for ZNF32

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF32

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 10q22-q25 Ensembl cytogenetic band: 10q11.21 HGNC cytogenetic band: 10q22-q25

ZNF32 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ZNF32 gene location

GeneLoc information about chromosome 10 GeneLoc Exon Structure

GeneLoc location for GC10M044139: view genomic region (about GC identifiers)

Start:	44,139,307 bp from pter	End:	44,144,326 bp from pter
Size:	5,020 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ZNF32_HUMAN, P17041 (See protein sequence)

Recommended Name: Zinc finger protein 32

Size: 273 amino acids; 31029 Da

Subcellular location: Nucleus (Potential)

5 PDB 3D structures from and Proteopedia for ZNF32:

2EPC (3D)

2EPT (3D)

2EPU (3D)

2YTA (3D)

2YTB (3D)

Secondary accessions: Q92951

Explore the universe of human proteins at neXtProt for ZNF32: NX_P17041

Post-translational modifications:

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_P17041

ZNF32 Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (2 alternative transcripts):

NP_001005368.1 NP_008904.1

ENSEMBL proteins:

ENSP00000363556 ENSP00000379143

Human Recombinant Protein Products for ZNF32:

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	Uscn Proteins for ZNF32

Gene Ontology (GO): 1 cellular component term (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005634	nucleus	IEA	--

ZNF32 for ontologies About GeneDecksing

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(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

ZNF32 for domains About GeneDecksing

3 InterPro domains/families:

IPR015880 Znf_C2H2-like

IPR013087 Znf_C2H2/integrase_DNA-bd

IPR007087 Znf_C2H2

Graphical View of Domain Structure for InterPro Entry P17041

ProtoNet protein and cluster: P17041

UniProtKB/Swiss-Prot: ZNF32_HUMAN, P17041

Similarity: Belongs to the krueppel C2H2-type zinc-finger protein family

Similarity: Contains 7 C2H2-type zinc fingers

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Molecular Function:

UniProtKB/Swiss-Prot Summary: ZNF32_HUMAN, P17041

Function: May be involved in transcriptional regulation

Genatlas biochemistry entry for ZNF32:

zinc finger protein 32 (KOX30) (C2H2 type,Kruppel-like)

Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0003677	DNA binding	IEA	--
GO:0008270	zinc ion binding	IEA	--

ZNF32 for ontologies About GeneDecksing

Phenotypes:
1 GenomeRNAi human phenotype for ZNF32:

Synthetic lethal with Ras

Animal Models:

inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for ZNF32

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In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF32

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Interactions:

Search SABiosciences Gene Network Central^TM Interacting Genes and Proteins Networks for ZNF32

STRING Interaction Network Preview (showing 3 interactants - click image to see more details)

3 Interacting proteins for ZNF32 (P17041³ ENSP00000363556⁴) via UniProtKB, MINT, STRING, and/or I2D

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
GRB2	P62993³, ENSP00000339007⁴	I2D: score=1 STRING: ENSP00000339007
POT1	ENSP00000350249⁴	STRING: ENSP00000350249
ULK2	ENSP00000354877⁴	STRING: ENSP00000354877

About this table

Gene Ontology (GO): 2 biological process terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006351	transcription, DNA-dependent	IEA	--
GO:0006355	regulation of transcription, DNA-dependent	IEA	--

ZNF32 for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for ZNF32
Search CenterWatch for drugs/clinical trials and news about ZNF32

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
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Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for ZNF32 gene (2 alternative transcripts):

NM_001005368.1 NM_006973.2

Unigene Cluster for ZNF32:

Zinc finger protein 32

Hs.522885 [show with all ESTs]

Unigene Representative Sequence: NM_001005368

4 Ensembl transcripts including schematic representations, and UCSC links where relevant:

ENST00000374433(uc001jbc.3) ENST00000475186 ENST00000485351 ENST00000395797(uc001jbb.3)

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		hsa-miR-641 hsa-miR-3617
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Additional cDNA sequence:

AK312132.1 BC022842.1 U69645.1 X52361.1

8 DOTS entries:

DT.416376 DT.92426666 DT.92426671 DT.97787564 DT.121218147 DT.40116710 DT.95169059 DT.95193196

24/130 AceView cDNA sequences (see all 130):

CR624115 BU688966 CF528084 AI621297 AW007761 BE257039 CK906228 CD674404

AI056412 AW248726 CF128395 AI338434 AI190521 AA830042 CA440617 BM822199

AW592850 BQ919297 CR626696 BU167609 AL534873 BC022842 BI766614 BM127038

GeneLoc Exon Structure

5 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF32 About this scheme

ExUns:	1a	·	1b	·	1c	^	2	^	3a	·	3b	·	3c	·	3d	^	4a	·	4b	·	4c	·	4d
SP1:							-		-				-		-
SP2:							-		-				-		-
SP3:									-				-		-
SP4:							-		-
SP5:															-

ECgene alternative splicing isoforms for ZNF32

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

ZNF32 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GCAAAATCCA

About this image

ZNF32 expression in embryonic tissues and stem cells
Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine About this table

4 LifeMap In Vivo Development Anatomical Compartments/Cells

Tissue

Anatomical Compartment

Cell

Category (developmental path)

Brain

Medulla Oblongata

Brain

Neural Tube

Mesencephalic Ventricular Zone

Neural Tube

Metencephalon

Neural Tube

Telencephalon

Neural Tube

Expression:

Positive

Negative

Selective marker

Experimental details:

Curated

Microarrays

In-situ hybridization

See ZNF32 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for ZNF32

SOURCE GeneReport for Unigene cluster: Hs.522885

SABiosciences Custom PCR Arrays for ZNF32

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In Situ
Assay Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF32

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of animals.

Orthologs for ZNF32 gene from 3/13 species (see all 13) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Details
mouse (Mus musculus)	Mammalia	Zfp637^{1 , 5}	zinc finger protein 637^{1, 5}	87.99(n)¹ 95.59(a)¹	6 (55.59 cM)⁵ 232337¹ NM_177684.2¹ NP_808352.1¹ 117841180⁵
zebrafish (Danio rerio)	Actinopterygii	LOC100007471¹	zinc finger protein 180-like	57.82(n) 51.18(a)	100007471 XM_001345884.1 XP_001345920.1
fruit fly (Drosophila melanogaster)	Insecta	BG:DS02740.8³	nucleic acid binding	33(a)	--

ENSEMBL Gene Tree for ZNF32 (if available)
TreeFam Gene Tree for ZNF32 (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 10 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs183273122^1,2		--	44138862(+)	`ATCTCC/TATCCT`	4	--	int¹ ds500¹ us2k¹		0	--	--	--	--
rs55878607^1,2	C	--	44138876(+)	`TAGGAG/CTGGAG`	4	--	ds500¹ us2k¹ int¹		2		NA	122
rs76757033^1,2	C	--	44138975(+)	`TAGACA/GTGAGT`	4	--	int¹ ds500¹ us2k¹		2		NA EA	122
rs139895051^1,2		--	44139075(+)	`ATTTTG/TCCCAG`	4	--	us2k¹ int¹ ds500¹		0	--	--	--	--
rs74138194^1,2	C	--	44139122(+)	`TAAGGA/GAGAAA`	4	--	us2k¹ int¹ ds500¹		3		WA NA	240
rs145336788^1,2		--	44139147(+)	`GATGAA/GGGGCT`	4	--	ds500¹ us2k¹ int¹		0	--	--	--	--
rs147701870^1,2		--	44139280(+)	`AGAATA/GAAGTG`	4	--	ds500¹ int¹ us2k¹		0	--	--	--	--
rs114780606^1,2	C	--	44139578(+)	`CTGGCC/TGCACA`	7	S G	mis¹ int¹ us2k¹		1		WA	220
rs116549780^1,2	C	--	44139600(+)	`TCTCCT/CGTGTG`	7	/T	syn¹ int¹ us2k¹		2		WA NA	4764
rs186177471^1,2	C	--	44139866(+)	`TCTCTC/TGTGGA`	7	K E	mis¹ int¹ us2k¹		0	--	--	--	--

HapMap Linkage Disequilibrium report for ZNF32 (44139307 - 44144326 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for ZNF32
1 CNV: 100932

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

ZNF32 for disorders           About GeneDecksing

OMIM gene information: 194539    OMIM disorders: --

5 diseases for ZNF32:    About MalaCards

epilepsia partialis continua tuberculous meningitis viral encephalitis meningitis

encephalitis

1 disease from the University of Copenhagen DISEASES database for ZNF32:

Viral encephalitis

Export disorders for ZNF32 gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for ZNF32 gene integrated from 9 sources:
(articles sorted by number of sources associating them with ZNF32)

Utopia: connect your pdf to the dynamic
world of online information

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S....Malek J. (2004)
The DNA sequence and comparative analysis of human chromosome 10. (PubMed id 15164054)^{1, 2} Deloukas P.... Rogers J. (2004)
C2H2-546: a zinc finger protein differentially expressed in HTLV-1 infected T cells. (PubMed id 9475118)^{1, 2} Drew P.D.... Becker K.G. (1997)
Multiple genes encoding zinc finger domains are expressed in human T cells. (PubMed id 2288909)^{1, 2} Thiesen H.-J. (1990)
Human zinc finger gene ZNF23 (Kox16) maps to a zinc finger gene cluster on chromosome 16q22, and ZNF32 (Kox30) to chromosome region 10q23-q24. (PubMed id 8500793)^{1, 9} Cannizzaro L.A....Thiesen H.J. (1993)
Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening. (PubMed id 17474147)¹ Wu C....Li S.S. (2007)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)¹ Strausberg R.L....Marra M.A. (2002)
Characterization and mapping of human genes encoding zinc finger proteins. (PubMed id 1946370)¹ Bray P.L.... Dawid I.B. (1991)

(in PubMed, OMIM, and NCBI Bookshelf)
About This Section

		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 7580	HGNC: 13095	AceView: ZNF32	Ensembl:ENSG00000169740	euGenes: HUgn7580
ECgene: ZNF32	H-InvDB: ZNF32

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for ZNF32	Pharmacogenomics, SNPs, Pathways

Intellectual Property for ZNF32 gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

About This Section

Patent Information for ZNF32 gene:
Search GeneIP for patents involving ZNF32

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section


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GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 13 May 2013

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Category			VWF (GIFTS: 73) von Willebrand factor
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The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

The GeneCards Human Gene Database

Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

Hot genes Disease genes ZNF32 gene at Home site.

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ZNF32 Gene

zinc finger protein 32

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ZNF32 Gene

zinc finger protein 32

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