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Aliases for ZNF316 Gene

Aliases for ZNF316 Gene

  • Zinc Finger Protein 316 2 3
  • ENST00000305834 3
  • MZF-3 3

External Ids for ZNF316 Gene

Previous GeneCards Identifiers for ZNF316 Gene

  • GC07P006426
  • GC07U901525
  • GC07P006643
  • GC07P006676

Summaries for ZNF316 Gene

GeneCards Summary for ZNF316 Gene

ZNF316 (Zinc Finger Protein 316) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF316 Gene

  • May be involved in transcriptional regulation.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF316 Gene

Genomics for ZNF316 Gene

Regulatory Elements for ZNF316 Gene

Genomic Location for ZNF316 Gene

Start:
6,637,322 bp from pter
End:
6,658,279 bp from pter
Size:
20,958 bases
Orientation:
Plus strand

Genomic View for ZNF316 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF316 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF316 Gene

Proteins for ZNF316 Gene

  • Protein details for ZNF316 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NFI3-ZN316_HUMAN
    Recommended name:
    Zinc finger protein 316
    Protein Accession:
    A6NFI3
    Secondary Accessions:

    Protein attributes for ZNF316 Gene

    Size:
    1004 amino acids
    Molecular mass:
    108437 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF316 Gene

Proteomics data for ZNF316 Gene at MOPED

Post-translational modifications for ZNF316 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF316 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZNF316 Gene

Domains for ZNF316 Gene

Gene Families for ZNF316 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF316 Gene

Suggested Antigen Peptide Sequences for ZNF316 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NFI3

UniProtKB/Swiss-Prot:

ZN316_HUMAN :
  • A6NFI3
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 15 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF316: view

Function for ZNF316 Gene

Molecular function for ZNF316 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF316 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF316: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF316 Gene

Localization for ZNF316 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF316 Gene

Gene Ontology (GO) - Cellular Components for ZNF316 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF316: view

No data available for Subcellular locations from COMPARTMENTS for ZNF316 Gene

Pathways for ZNF316 Gene

SuperPathways for ZNF316 Gene

No Data Available

Interacting Proteins for ZNF316 Gene

Gene Ontology (GO) - Biological Process for ZNF316 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF316: view

No data available for Pathways by source for ZNF316 Gene

Transcripts for ZNF316 Gene

mRNA/cDNA for ZNF316 Gene

(4) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF316 Gene

Zinc finger protein 316:
Representative Sequences:

miRNA Products

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF316 Gene

No ASD Table

Relevant External Links for ZNF316 Gene

GeneLoc Exon Structure for
ZNF316
ECgene alternative splicing isoforms for
ZNF316

Expression for ZNF316 Gene

mRNA expression in normal human tissues for ZNF316 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ZNF316 Gene

SOURCE GeneReport for Unigene cluster for ZNF316 Gene Hs.112668

genes like me logo Genes that share expressions with ZNF316: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF316 Gene

Orthologs for ZNF316 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF316 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC472281 35
  • 98.77 (n)
  • 98.88 (a)
cow
(Bos Taurus)
Mammalia LOC618217 35
  • 86.33 (n)
  • 87.42 (a)
dog
(Canis familiaris)
Mammalia ZNF316 35
  • 85.08 (n)
  • 83.85 (a)
mouse
(Mus musculus)
Mammalia Zfp316 35
  • 79.3 (n)
  • 78.53 (a)
Zfp316 16
rat
(Rattus norvegicus)
Mammalia Zfp316 35
  • 78.73 (n)
  • 78.33 (a)
Species with no ortholog for ZNF316:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF316 Gene

ENSEMBL:
Gene Tree for ZNF316 (if available)
TreeFam:
Gene Tree for ZNF316 (if available)

Paralogs for ZNF316 Gene

Selected SIMAP similar genes for ZNF316 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZNF316: view

No data available for Paralogs for ZNF316 Gene

Variants for ZNF316 Gene

Sequence variations from dbSNP and Humsavar for ZNF316 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs940868 -- 6,648,495(-) CTCCC(C/T)GGGTC intron-variant
rs940869 -- 6,648,482(-) GTGGC(A/G)CTGCT intron-variant
rs940870 -- 6,641,988(-) CACCT(A/G)ATACA intron-variant
rs940874 -- 6,656,703(-) AACAT(A/C)TTCAC utr-variant-3-prime, downstream-variant-500B
rs1007999 -- 6,658,453(+) ttagc(C/T)gagtg downstream-variant-500B

Relevant External Links for ZNF316 Gene

HapMap Linkage Disequilibrium report
ZNF316

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZNF316 Gene

Disorders for ZNF316 Gene

No disorders were found for ZNF316 Gene.

No data available for UniProtKB/Swiss-Prot for ZNF316 Gene

Publications for ZNF316 Gene

  1. A quantitative atlas of mitotic phosphorylation. (PMID: 18669648) Dephoure N. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2008) 3 4
  2. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 3
  5. Large-scale proteomics analysis of the human kinome. (PMID: 19369195) Oppermann F.S. … Daub H. (Mol. Cell. Proteomics 2009) 4

Products for ZNF316 Gene

Sources for ZNF316 Gene

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