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Aliases for ZNF302 Gene

Aliases for ZNF302 Gene

  • Zinc Finger Protein 302 2 3 5
  • Zinc Finger Protein 327 3 4
  • ZNF135L 3 4
  • ZNF140L 3 4
  • ZNF327 3 4
  • Zinc Finger Protein 135-Like 4
  • Zinc Finger Protein 140-Like 4
  • MSTP154 3
  • MST154 3
  • HSD16 3

External Ids for ZNF302 Gene

Previous GeneCards Identifiers for ZNF302 Gene

  • GC19P035786
  • GC19P035617
  • GC19P039844
  • GC19P039861
  • GC19P039824
  • GC19P039862
  • GC19P039863
  • GC19P035168
  • GC19P031675

Summaries for ZNF302 Gene

Entrez Gene Summary for ZNF302 Gene

  • This gene encodes a member of the zinc-finger protein family. The encoded protein contains seven C2H2-type zinc fingers and a KRAB domain, but its function has yet to be determined. Alternatively spliced transcript variants have been described. [provided by RefSeq, Mar 2014]

GeneCards Summary for ZNF302 Gene

ZNF302 (Zinc Finger Protein 302) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZNF181.

UniProtKB/Swiss-Prot for ZNF302 Gene

  • May be involved in transcriptional regulation.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF302 Gene

Genomics for ZNF302 Gene

Regulatory Elements for ZNF302 Gene

Enhancers for ZNF302 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F034676 1.1 ENCODE 47.6 +0.1 50 2.5 PKNOX1 SIN3A FEZF1 ZNF2 YY1 ZNF766 ZNF302 ZNF416 ZNF207 ZNF143 TMEM147-AS1 ZNF302 ZNF792 HAUS5 LSM14A RBM42 LINC01766 ZNF181 KIAA0355 LOC100419842
GH19F034672 1 ENCODE 47.6 -3.9 -3949 2.8 PKNOX1 ARNT MLX ARID4B ZNF766 FOS KLF13 SP5 MIER2 REST ZNF302 TMEM147-AS1 HAUS5 ZNF181 RBM42 ZNF599 SCGB2B2 SCGB2B3P
GH19F034666 1.1 Ensembl ENCODE 43.1 -10.1 -10110 1.3 KLF17 ZNF2 GLIS2 SP3 ZNF645 ZEB2 ZNF518A ZFP69B ZSCAN16 ZNF341 ZNF302 LINC01766 LOC100419842 LINC00904 ENSG00000270544 ENSG00000271171 ENSG00000267626 ZNF181 ENSG00000268947 TMEM147-AS1
GH19F034732 1.2 ENCODE 11.3 +56.4 56372 2.8 PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF181 LINC01766 LOC100419842 LINC00904 ENSG00000270544 ENSG00000271171 ENSG00000267626 LINC01801 ENSG00000271049 LOC102723540
GH19F034645 0.9 ENCODE 14.2 -31.8 -31826 1.2 RAD21 YY1 RARA CREM REST TBX21 NR2F2 TGIF2 NFIL3 RFX3 ZNF181 ZNF302 SCGB2B3P SCGB2B2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF302 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF302 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000345780 -38 2799 PKNOX1 ZFP64 SIN3A FEZF1 ZNF2 YY1 ZNF766 ZNF302 ZNF416 ZNF207

Transcription factor binding sites by QIAGEN in the ZNF302 gene promoter:

Genomic Location for ZNF302 Gene

Chromosome:
19
Start:
34,677,639 bp from pter
End:
34,686,397 bp from pter
Size:
8,759 bases
Orientation:
Plus strand

Genomic View for ZNF302 Gene

Genes around ZNF302 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF302 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF302 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF302 Gene

Proteins for ZNF302 Gene

  • Protein details for ZNF302 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NR11-ZN302_HUMAN
    Recommended name:
    Zinc finger protein 302
    Protein Accession:
    Q9NR11
    Secondary Accessions:
    • Q658J3
    • Q9BZD8
    • Q9P0J4

    Protein attributes for ZNF302 Gene

    Size:
    478 amino acids
    Molecular mass:
    54814 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF302 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF302 Gene

Post-translational modifications for ZNF302 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF302 Gene

Domains & Families for ZNF302 Gene

Gene Families for ZNF302 Gene

Protein Domains for ZNF302 Gene

Suggested Antigen Peptide Sequences for ZNF302 Gene

Graphical View of Domain Structure for InterPro Entry

Q9NR11

UniProtKB/Swiss-Prot:

ZN302_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 7 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 7 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF302: view

Function for ZNF302 Gene

Molecular function for ZNF302 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.

Gene Ontology (GO) - Molecular Function for ZNF302 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0003700 transcription factor activity, sequence-specific DNA binding IBA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF302: view

Phenotypes for ZNF302 Gene

genes like me logo Genes that share phenotypes with ZNF302: view

Animal Model Products

miRNA for ZNF302 Gene

miRTarBase miRNAs that target ZNF302

Inhibitory RNA Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF302 Gene

Localization for ZNF302 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF302 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZNF302 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF302 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF302: view

Pathways & Interactions for ZNF302 Gene

SuperPathways for ZNF302 Gene

SuperPathway Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF302: view

Pathways by source for ZNF302 Gene

2 Reactome pathways for ZNF302 Gene

Gene Ontology (GO) - Biological Process for ZNF302 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA,IBA --
genes like me logo Genes that share ontologies with ZNF302: view

No data available for SIGNOR curated interactions for ZNF302 Gene

Transcripts for ZNF302 Gene

Unigene Clusters for ZNF302 Gene

Zinc finger protein 302:
Representative Sequences:

Inhibitory RNA Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF302 Gene

ExUns: 1a · 1b · 1c · 1d · 1e · 1f · 1g · 1h · 1i · 1j ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6a · 6b · 6c ^ 7a · 7b · 7c ^ 8a · 8b ·
SP1: - - - - - - - - -
SP2: - - - - - - - -
SP3: - - - - - - - - -
SP4: - - - - - - - - - - -
SP5: - - - - - - - - - -
SP6: - - - - - -
SP7: - - - - - - - -
SP8: - - - - -
SP9: - - - - -
SP10: - - - -
SP11: - - - - - -
SP12: - - - - - -
SP13: - - - - - - - - - - - -
SP14: - - - - -
SP15: - - - -
SP16: - - - - - - - - - - - - -
SP17: - - - -

ExUns: 8c · 8d · 8e · 8f · 8g · 8h · 8i · 8j · 8k
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:
SP17:

Relevant External Links for ZNF302 Gene

GeneLoc Exon Structure for
ZNF302
ECgene alternative splicing isoforms for
ZNF302

Expression for ZNF302 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF302 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF302 Gene:

ZNF302

SOURCE GeneReport for Unigene cluster for ZNF302 Gene:

Hs.436350
genes like me logo Genes that share expression patterns with ZNF302: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF302 Gene

Orthologs for ZNF302 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZNF302 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF302 34 35
  • 99.08 (n)
mouse
(Mus musculus)
Mammalia Zfp459 35
  • 38 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 37 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ZAP1 35
  • 11 (a)
OneToMany
Species where no ortholog for ZNF302 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF302 Gene

ENSEMBL:
Gene Tree for ZNF302 (if available)
TreeFam:
Gene Tree for ZNF302 (if available)

Paralogs for ZNF302 Gene

(506) SIMAP similar genes for ZNF302 Gene using alignment to 7 proteins:

Pseudogenes.org Pseudogenes for ZNF302 Gene

genes like me logo Genes that share paralogs with ZNF302: view

Variants for ZNF302 Gene

Sequence variations from dbSNP and Humsavar for ZNF302 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs10401309 -- 34,684,844(+) CATGG(C/G)TCATC nc-transcript-variant, reference, synonymous-codon, utr-variant-3-prime
rs10401647 -- 34,679,759(+) GTTCA(A/G)TATAT intron-variant
rs10410491 -- 34,682,547(+) TATTT(A/G)TCTCT intron-variant
rs10413838 -- 34,676,785(+) TCAAT(G/T)AACAT nc-transcript-variant, upstream-variant-2KB
rs10420803 -- 34,678,196(+) GCCTT(C/G)CGAAG intron-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for ZNF302 Gene

Variant ID Type Subtype PubMed ID
nsv978806 CNV duplication 23825009
esv3329051 OTHER inversion 20981092
esv2758756 CNV gain 17122850

Variation tolerance for ZNF302 Gene

Residual Variation Intolerance Score: 68.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 9.88; 89.73% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF302 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF302

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF302 Gene

Disorders for ZNF302 Gene

Relevant External Links for ZNF302

Genetic Association Database (GAD)
ZNF302
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF302

No disorders were found for ZNF302 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF302 Gene

Publications for ZNF302 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  2. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  3. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  4. Uncovering global SUMOylation signaling networks in a site-specific manner. (PMID: 25218447) Hendriks I.A. … Vertegaal A.C. (Nat. Struct. Mol. Biol. 2014) 4 64
  5. Maintenance of silent chromatin through replication requires SWI/SNF- like chromatin remodeler SMARCAD1. (PMID: 21549307) Rowbotham S.P. … Mermoud J.E. (Mol. Cell 2011) 3 64

Products for ZNF302 Gene

Sources for ZNF302 Gene

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