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Aliases for ZNF292 Gene

Aliases for ZNF292 Gene

  • Zinc Finger Protein 292 2 3
  • Putative Protein Product Of Nbla00365 3
  • 16 Zinc-Finger Domain Protein 3
  • Nbla00365 3
  • BA393I2.3 3
  • KIAA0530 4
  • ZFP292 3
  • ZN-16 3
  • Zn-15 3

External Ids for ZNF292 Gene

Summaries for ZNF292 Gene

GeneCards Summary for ZNF292 Gene

ZNF292 (Zinc Finger Protein 292) is a Protein Coding gene. GO annotations related to this gene include RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription. An important paralog of this gene is ZNF654.

UniProtKB/Swiss-Prot for ZNF292 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF292 Gene

Genomics for ZNF292 Gene

Genomic Location for ZNF292 Gene

Start:
87,152,833 bp from pter
End:
87,264,196 bp from pter
Size:
111,364 bases
Orientation:
Plus strand

Genomic View for ZNF292 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF292 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF292 Gene

Regulatory Elements for ZNF292 Gene

Proteins for ZNF292 Gene

  • Protein details for ZNF292 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O60281-ZN292_HUMAN
    Recommended name:
    Zinc finger protein 292
    Protein Accession:
    O60281
    Secondary Accessions:
    • Q5W0B2
    • Q7Z3L7
    • Q9H8G3
    • Q9H8J4

    Protein attributes for ZNF292 Gene

    Size:
    2723 amino acids
    Molecular mass:
    304816 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=BAB14622.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB14654.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=CAD97823.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAD97823.1; Type=Frameshift; Positions=637; Evidence={ECO:0000305}; Sequence=CAD97823.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ZNF292 Gene

    Alternative splice isoforms for ZNF292 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF292 Gene

Proteomics data for ZNF292 Gene at MOPED

Post-translational modifications for ZNF292 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF292 Gene

No data available for DME Specific Peptides for ZNF292 Gene

Domains for ZNF292 Gene

Gene Families for ZNF292 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF292 Gene

UniProtKB/Swiss-Prot:

ZN292_HUMAN
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • O60281
Similarity:
  • Contains 15 C2H2-type zinc fingers.:
    • O60281
genes like me logo Genes that share domains with ZNF292: view

Function for ZNF292 Gene

Molecular function for ZNF292 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF292 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001077 RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription IEA --
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF292: view

miRNA for ZNF292 Gene

miRTarBase miRNAs that target ZNF292

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF292 Gene

Localization for ZNF292 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF292 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF292 Gene COMPARTMENTS Subcellular localization image for ZNF292 gene
Compartment Confidence
nucleus 4

Gene Ontology (GO) - Cellular Components for ZNF292 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF292: view

Pathways for ZNF292 Gene

SuperPathways for ZNF292 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF292 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IEA --
genes like me logo Genes that share ontologies with ZNF292: view

No data available for Pathways by source for ZNF292 Gene

Transcripts for ZNF292 Gene

Unigene Clusters for ZNF292 Gene

Zinc finger protein 292:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF292 Gene

ExUns: 1 ^ 2 ^ 3a · 3b · 3c ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13
SP1: - -
SP2: -
SP3:
SP4: - - - - - - - - - -
SP5: - - - - - - -

Relevant External Links for ZNF292 Gene

GeneLoc Exon Structure for
ZNF292
ECgene alternative splicing isoforms for
ZNF292

Expression for ZNF292 Gene

mRNA expression in normal human tissues for ZNF292 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZNF292 Gene

SOURCE GeneReport for Unigene cluster for ZNF292 Gene Hs.485892

genes like me logo Genes that share expressions with ZNF292: view

Orthologs for ZNF292 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF292 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF292 36
  • 99.56 (n)
  • 99.63 (a)
ZNF292 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZNF292 36
  • 91.05 (n)
  • 91.42 (a)
ZNF292 37
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF292 36
  • 93.42 (n)
  • 93.57 (a)
ZNF292 37
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp292 36
  • 84.76 (n)
  • 81.87 (a)
Zfp292 16
Zfp292 37
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZNF292 37
  • 73 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZNF292 37
  • 70 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zfp292 36
  • 85.23 (n)
  • 82.52 (a)
chicken
(Gallus gallus)
Aves ZNF292 36
  • 73.43 (n)
  • 70.64 (a)
ZNF292 37
  • 69 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ZNF292 37
  • 63 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.9913 36
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.7312 36
znf292 36
  • 59.47 (n)
  • 52.37 (a)
zebrafish
(Danio rerio)
Actinopterygii znf292a 37
  • 31 (a)
OneToMany
znf292b 37
  • 32 (a)
OneToMany
Species with no ortholog for ZNF292:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZNF292 Gene

ENSEMBL:
Gene Tree for ZNF292 (if available)
TreeFam:
Gene Tree for ZNF292 (if available)

Paralogs for ZNF292 Gene

Paralogs for ZNF292 Gene

Selected SIMAP similar genes for ZNF292 Gene using alignment to 7 proteins:

genes like me logo Genes that share paralogs with ZNF292: view

Variants for ZNF292 Gene

Sequence variations from dbSNP and Humsavar for ZNF292 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs15511 -- 87,261,749(+) TATGT(A/C)TGTTA missense, reference
rs912815 -- 87,161,626(-) CCAAC(C/G)TGGGC intron-variant
rs959038 -- 87,174,290(-) GACAA(A/G)TCACA intron-variant
rs989282 -- 87,160,513(-) ATATA(C/T)ACACA intron-variant
rs989283 -- 87,160,491(-) ACACA(C/T)ATATA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF292 Gene

Variant ID Type Subtype PubMed ID
dgv1991e1 CNV Complex 17122850
esv268184 CNV Insertion 20981092

Relevant External Links for ZNF292 Gene

HapMap Linkage Disequilibrium report
ZNF292
Human Gene Mutation Database (HGMD)
ZNF292

Disorders for ZNF292 Gene

Relevant External Links for ZNF292

Genetic Association Database (GAD)
ZNF292
Human Genome Epidemiology (HuGE) Navigator
ZNF292
genes like me logo Genes that share disorders with ZNF292: view

No data available for UniProtKB/Swiss-Prot for ZNF292 Gene

Publications for ZNF292 Gene

  1. Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. (PMID: 9628581) Nagase T. … Ohara O. (DNA Res. 1998) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Genome-wide association with MRI atrophy measures as a quantitative trait locus for Alzheimer's disease. (PMID: 21116278) Furney S.J. … . (Mol. Psychiatry 2011) 3 49
  4. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  5. A catalogue of putative HIV-1 protease host cell substrates. (PMID: 22944692) Impens F. … Gevaert K. (Biol. Chem. 2012) 3

Products for ZNF292 Gene

Sources for ZNF292 Gene

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