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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ZNF276 Gene

protein-coding   GIFtS: 48
GCID: GC16P089788

zinc finger protein 276

(Previous name: zinc finger protein 276 homolog (mouse) )
(Previous symbol: ZFP276)
 Explore 4 diseases affiliated with
ZNF276 via
MalaCards
our new
 Human Malady Compendium 
Biological research products
for ZNF276    

Aliases
for ZNF276 gene

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section
Aliases
Zinc Finger Protein 2761 2     MGC454171
ZFP2761 2 3 5     Zinc Finger Protein 276 Homolog (Mouse)1
ZNF4771 2 3     Centromere Protein Z2
CENP-Z1 2     Zfp-2763
CENPZ1 2     Zinc Finger Protein 276 Homolog2
Zinc Finger Protein 4772 3     Zfp-2763

External Ids:    HGNC: 233301   Entrez Gene: 928222   Ensembl: ENSG000001588057   OMIM: 6084605   UniProtKB: Q8N5543   

Export aliases for ZNF276 gene to outside databases

Previous GC identifers: GC16P088315 GC16P075482


Summaries
for ZNF276 gene

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section
UniProtKB/Swiss-Prot: ZN276_HUMAN, Q8N554
Function: May be involved in transcriptional regulation




Genomic Views
for ZNF276 gene

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000016.9  NC_018927.1  NT_010542.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ZNF276 gene promoter:
         AML1a   CP2   NF-kappaB2   NF-kappaB1   NF-kappaB   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmid: ZNF276 promoter sequence
   Search SABiosciences Chromatin IP Primers for ZNF276

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF276


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 16q24.3   Ensembl cytogenetic band:  16q24.3   HGNC cytogenetic band: 16q24.3

ZNF276 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ZNF276 gene location

GeneLoc information about chromosome 16         GeneLoc Exon Structure

GeneLoc location for GC16P089788:  view genomic region     (about GC identifiers)

Start:
 89,786,808 bp from pter      End:
 89,807,333 bp from pter
Size:
 20,526 bases      Orientation:
 plus strand

Proteins
for ZNF276 gene

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section
UniProtKB/Swiss-Prot: ZN276_HUMAN, Q8N554 (See protein sequence)
Recommended Name: Zinc finger protein 276  
Size: 614 amino acids; 67219 Da
Subcellular location: Nucleus (Potential)
Sequence caution: Sequence=AAH32781.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Sequence=AAI10349.1; Type=Erroneous initiation; Note=Translation N-terminally extended;
Secondary accessions: Q0VGA1 Q2TBE8 Q3B7H7
Alternative splicing: 2 isoforms:  Q8N554-1   Q8N554-2   

Explore the universe of human proteins at neXtProt for ZNF276: NX_Q8N554

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q8N554

    • ZNF276 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001106997.1  NP_689500.2  

    ENSEMBL proteins: 
     ENSP00000455466   ENSP00000289816   ENSP00000457210   ENSP00000415836   ENSP00000457313  
     ENSP00000455345   ENSP00000415999  

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    Uscn Proteins for ZNF276

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005634nucleus IEA--


    ZNF276 for ontologies           About GeneDecksing



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    Protein Domains /
    Families
    for ZNF276 gene

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    ZNF276 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR015880 Znf_C2H2-like
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR007087 Znf_C2H2
     IPR012934 Znf_AD

    Graphical View of Domain Structure for InterPro Entry Q8N554

    ProtoNet protein and cluster: Q8N554

    2 Blocks protein families:
    IPB011069 Aspartate carbamoyltransferase
    IPB012934 Zinc finger


    UniProtKB/Swiss-Prot: ZN276_HUMAN, Q8N554
    Similarity: Contains 5 C2H2-type zinc fingers
    Similarity: Contains 1 ZAD (zinc-finger associated) domain


    Function
    for ZNF276 gene

    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section
    Function Summary:

         UniProtKB/Swiss-Prot: ZN276_HUMAN, Q8N554
    Function: May be involved in transcriptional regulation

    miRNA
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    Inhib. RNA
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    Clone
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    In Situ Assay
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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003676nucleic acid binding ----
    GO:0003677DNA binding IEA--
    GO:0008270zinc ion binding IEA--


    ZNF276 for ontologies           About GeneDecksing



    Pathways & Interactions
    for ZNF276 gene

    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF276

    STRING Interaction Network Preview (showing 3 interactants - click image to see more details)

    5 Interacting proteins for ZNF276 (Q8N5542, 3 ENSP000004158364) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ATXN1P542532, 3, ENSP000002447694MINT-2877949 I2D: score=3 STRING: ENSP00000244769
    ZBTB8AQ96BR92, 3, ENSP000003626094MINT-67908 I2D: score=3 STRING: ENSP00000362609
    NFKB1P198383, ENSP000002265744I2D: score=1 STRING: ENSP00000226574
    GCC1Q96CN93I2D: score=1 
    MSH3P205853I2D: score=1 
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--


    ZNF276 for ontologies           About GeneDecksing



    Drugs & Compounds
    for ZNF276 gene

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ZNF276
    Search CenterWatch for drugs/clinical trials and news about ZNF276 / ZN276 

    Transcripts
    for ZNF276 gene

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section
    REFSEQ mRNAs for ZNF276 gene (2 alternative transcripts): 
    NM_001113525.1  NM_152287.3  

    Unigene Cluster for ZNF276:

    Zinc finger protein 276
    Hs.290154  [show with all ESTs]
    Unigene Representative Sequence: NM_001113525
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000562530 ENST00000289816(uc010ciq.3 uc002foq.4 uc010cir.3 uc002for.4 uc010cis.3 uc002fos.4 uc002fot.4 uc010vpm.2)
    ENST00000568064 ENST00000563983(uc010cit.2) ENST00000443381 ENST00000568295
    ENST00000561536 ENST00000563541 ENST00000569426 ENST00000564004 ENST00000569582
    ENST00000569901 ENST00000446326

    miRNA
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    hsa-miR-1226 hsa-miR-520d-5p hsa-miR-944 hsa-miR-4275 hsa-miR-548t hsa-miR-3681 hsa-miR-524-5p hsa-miR-32*
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    Inhib. RNA
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    Additional cDNA sequence: 

    AK096004.1 AK289801.1 AK295770.1 AK315793.1 BC032781.1 BC038839.1 BC105959.1 BC107603.1 
    BC110348.1 

    20 DOTS entries:

    DT.98131728  DT.95071370  DT.95345597  DT.120714578  DT.120714449  DT.95132431  DT.40247153  DT.92436711 
    DT.100029399  DT.95356823  DT.120714406  DT.120714557  DT.446662  DT.91663653  DT.91796157  DT.120714496 
    DT.207278  DT.100752051  DT.86856648  DT.99975779 

    24/105 AceView cDNA sequences (see all 105):

    BU735910 BM988644 BG236318 BI819458 AI926131 BU956483 CR620615 BI554136 
    Z40208 BM681111 BQ432535 AW074388 CD515874 NM_152287 BM727684 BU786178 
    AI915238 BP351097 BM702374 BQ694309 BQ549235 AA327036 AA455885 BM921035 

    GeneLoc Exon Structure

    5/10 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF276 (see all 10)    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15 ^ 16
    SP1:                                                                                                              -                           
    SP2:        -     -     -                 -                                                                                                   
    SP3:                    -                 -                                                                                                   
    SP4:                                                                                            -                                             
    SP5:                                                                                                                                          


    ECgene alternative splicing isoforms for ZNF276

    Expression
    for ZNF276 gene

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ZNF276 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTATGCTTGT

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)
    About this image

    ZNF276 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Late limb mesenchymal cells (LLM cells) (Primary Cell)Bone, Cartilage, Limb
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See ZNF276 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ZNF276

    SOURCE GeneReport for Unigene cluster: Hs.290154
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    In Situ
    Assay Products:     
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    Orthologs
    for ZNF276 gene

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
    This gene was present in the common ancestor of chordates.

    Orthologs for ZNF276 gene from 3/11 species (see all 11)    About this table
    Organism Taxonomic
    classification    		 Gene Description Human
    Similarity    		 Orthology
    Type    		 Details
    chicken
    (Gallus gallus)    		 Aves ZNF2761 zinc finger protein 276 71.82(n)
    70.17(a)    		   415853  XM_414213.3  XP_414213.2 
    lizard
    (Anolis carolinensis)    		 Reptilia ZNF2766
    		 --
    		 57(a)
    		 1 ↔ 1
    		 GL344093.1(47794-58818)
    zebrafish
    (Danio rerio)    		 Actinopterygii Dr.199562 Transcribed sequence with weak similarity to protein refNP_444251.1 (H.sapiens) zinc finger protein homologous to Zfp91 in mouse [Homo sapiens] less 86.91(n)    CF103168.1 


    ENSEMBL Gene Tree for ZNF276 (if available)
    TreeFam Gene Tree for ZNF276 (if available) 

    Paralogs
    for ZNF276 gene

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ZNF276 gene
    ZNF6922  ZNF6532  ZFP912  ENSG000002674772  ZFP91-CNTF2  
    18/19 SIMAP similar genes for ZNF276 using alignment to 7 protein entries:     ZN276_HUMAN (see all proteins) (see all similar genes):
    kr-znf3    ZNF692    A-328A3.4    ZFS-2    HZF40    ZFS-6
    ZNF55    ZNF72    HZF16    ZNF844    DKFZp434J0650    ZNF
    ZNF808    ZNFN1A2    smap-7    ZNF78L1    DKFZp547H249    MAZ

    ZNF276 for paralogs           About GeneDecksing



    Genomic Variants
    for ZNF276 gene

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/441 NCBI SNPs in ZNF276 are shown (see all 441)     About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance    		Chr 16 posSequence#AA
    Chg    		TypeMore#Allele
    freq    		PopTotal
    sample    		More
    ----------
    rs1412452621,2
    		C,--89789491(+) ACGAGC/TGCTGT 2 -- int11Minor allele frequency- T:0.00EU 535
    rs285577821,2
    		C,F,--89789506(+) CTCCGC/ACTGCT 2 -- int12Minor allele frequency- A:0.03NA EU 690
    rs2014348431,2
    		C,--89789530(+) GCCACA/GCTGAT 2 -- int11Minor allele frequency- G:0.00EU 1305
    rs1414802991,2
    		C,F,--89789565(+) CCCAAC/GAGGGG 4 T R mis11Minor allele frequency- G:0.00NA 4536
    rs1114812991,2
    		C,F,--89789569(+) ACAGGG/AGCAGA 4 /G syn12Minor allele frequency- A:0.01CSA NA 4536
    rs1924545761,2
    		C,--89789633(+) GACCAG/TCCGTG 2 -- int10--------
    rs1388768691,2
    		C,--89789634(+) ACCAGC/TCGTGG 2 -- int10--------
    rs617445221,2
    		C,F,--89789675(+) GATCTG/TATCAC 4 L syn12Minor allele frequency- T:0.00NS NA 4610
    rs1463016731,2
    		C,--89789702(+) CTGCAC/TGGCTT 4 H syn10--------
    rs1418290861,2
    		C,--89789741(+) AGCTGC/TGGGGC 4 C syn11Minor allele frequency- T:0.00NA 4512

    HapMap Linkage Disequilibrium report for ZNF276 (89786808 - 89807333 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 5 variations for ZNF276
         3 CNVs: 49803 4977 4978
         2 Indels: 72702 45492

    SABiosciences Cancer Mutation PCR Assays
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    Disorders / Diseases
    for ZNF276 gene

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    ZNF276 for disorders           About GeneDecksing

    OMIM gene information: 608460    OMIM disorders: --

    4 diseases for ZNF276:    About MalaCards
    fanconi's anemia    anemia    breast cancer    ataxia


    Export disorders for ZNF276 gene to outside databases

    Publications
    for ZNF276 gene

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ZNF276 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with ZNF276)    		    Utopia: connect your pdf to the dynamic
    world of online information

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. Cloning and mutation analysis of ZFP276 as a candidate tumor suppressor in breast cancer. (PubMed id 14605947)1, 2 Wong J.C.... Buchwald M. (2003)
    4. Cloning and analysis of the mouse Fanconi anemia group A cDNA and an overlapping penta zinc finger cDNA. (PubMed id 10936049)1, 3 Wong J.C....Buchwald M. (2000)
    5. A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648)2 Dephoure N.... Gygi S.P. (2008)
    6. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560)1 Kimura K.... Sugano S. (2006)
    7. A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. (PubMed id 16713569)1 Lim J.... Zoghbi H.Y. (2006)
    8. Towards a proteome-scale map of the human protein-protein interaction network. (PubMed id 16189514)1 Rual J.F....Vidal M. (2005)
    9. The sequence and analysis of duplication-rich human chromosome 16. (PubMed id 15616553)2 Martin J.... Pennacchio L.A. (2004)
    10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)

    External Searches for ZNF276 gene

    (in PubMed, OMIM, and NCBI Bookshelf)
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    Genome Databases showing ZNF276 gene

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 92822 HGNC: 23330 AceView: ZFP276 Ensembl:ENSG00000158805 euGenes: HUgn92822
    ECgene: ZNF276 H-InvDB: ZNF276

    Other Databases showing ZNF276 gene

    (According to HUGE)
    About This Section
    		   --

    Specialized Databases showing ZNF276 gene

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ZNF276 Pharmacogenomics, SNPs, Pathways

    Intellectual Property
    for ZNF276 gene

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    		Patent Information for ZNF276 gene:
    Search GeneIP for patents involving ZNF276

    GeneCards and IP:
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