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Aliases for ZNF271P Gene

Aliases for ZNF271P Gene

  • Zinc Finger Protein 271, Pseudogene 2 3 5
  • C2H2 (Kruppel-Type) Zinc Finger Protein Pseudogene 3
  • Epstein-Barr Virus-Induced Zinc Finger Protein 3
  • EBV-Induced Zinc Finger Protein 3
  • Zinc Finger Protein ZNFphex133 3
  • Zinc Finger Protein HZF7 3
  • Zinc Finger Protein 271 2
  • Zinc Finger Protein Dp 3
  • CT-ZFP48 3
  • ZNF-EB 3
  • ZNF-Dp 3
  • ZNF271 3
  • ZNFEB 3
  • HZF7 3

External Ids for ZNF271P Gene

Previous HGNC Symbols for ZNF271P Gene

  • ZNF271

Summaries for ZNF271P Gene

Entrez Gene Summary for ZNF271P Gene

  • Zinc finger proteins interact with nucleic acids and have diverse functions. The zinc finger domain is a conserved amino acid sequence motif containing 2 specifically positioned cysteines and 2 histidines that are involved in coordinating zinc. Kruppel-related proteins form 1 family of zinc finger proteins. See ZFP93 (MIM 604749) for additional information on zinc finger proteins.[supplied by OMIM, Apr 2004]

GeneCards Summary for ZNF271P Gene

ZNF271P (Zinc Finger Protein 271, Pseudogene) is a Pseudogene.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF271P Gene

Genomics for ZNF271P Gene

Regulatory Elements for ZNF271P Gene

Enhancers for ZNF271P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G035495 1.4 ENCODE dbSUPER 11 +206.8 206774 3.1 MLX CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF143 SP3 TBX21 ENSG00000268573 ZNF397 ELP2 ZSCAN30 ZNF271P ZNF396 C18orf21 INO80C ENSG00000267140 ENSG00000279074
GH18G035343 1.8 FANTOM5 ENCODE dbSUPER 5.2 +54.6 54618 3.4 CREB3L1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 SP3 TBX21 MEF2D ZNF610 ZNF396 ZNF397 MAPRE2 ZNF24 ZNF271P GC18M035337
GH18G036096 0.8 dbSUPER 10.2 +807.2 807179 2.6 TBP ZFP64 RAD21 RFX5 FOS ZNF654 ZBTB11 ZNF426 REST ZNF781 RPRD1A ZSCAN30 ZNF397 MOCOS FHOD3 ZNF271P ELP2 GC18M036078
GH18G034860 1.1 Ensembl ENCODE 5.8 -429.6 -429640 0.9 PKNOX1 TBL1XR1 RAD21 ZBTB40 ETV6 IKZF2 CEBPB TBX21 RAD51 PBX2 MAPRE2 DTNA ZNF271P LOC105372061 ENSG00000268873
GH18G035875 0.4 ENCODE 4.3 +585.5 585491 0.1 L3MBTL2 MIR187 ZNF271P NRBF2P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF271P on UCSC Golden Path with GeneCards custom track

Promoters for ZNF271P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000102191 -172 1801 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 TBX21

Genomic Location for ZNF271P Gene

Chromosome:
18
Start:
35,290,272 bp from pter
End:
35,328,390 bp from pter
Size:
38,119 bases
Orientation:
Plus strand

Genomic View for ZNF271P Gene

Genes around ZNF271P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF271P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF271P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF271P Gene

Proteins for ZNF271P Gene

Post-translational modifications for ZNF271P Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF271P Gene

Domains & Families for ZNF271P Gene

Gene Families for ZNF271P Gene

Suggested Antigen Peptide Sequences for ZNF271P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZNF271P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for ZNF271P Gene

Function for ZNF271P Gene

genes like me logo Genes that share phenotypes with ZNF271P: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF271P Gene

Localization for ZNF271P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF271P Gene

Pathways & Interactions for ZNF271P Gene

SuperPathways for ZNF271P Gene

No Data Available

Interacting Proteins for ZNF271P Gene

Gene Ontology (GO) - Biological Process for ZNF271P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF271P Gene

Drugs & Compounds for ZNF271P Gene

No Compound Related Data Available

Transcripts for ZNF271P Gene

mRNA/cDNA for ZNF271P Gene

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF271P Gene

No ASD Table

Relevant External Links for ZNF271P Gene

GeneLoc Exon Structure for
ZNF271P
ECgene alternative splicing isoforms for
ZNF271P

Expression for ZNF271P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF271P Gene

NURSA nuclear receptor signaling pathways regulating expression of ZNF271P Gene:

ZNF271P
genes like me logo Genes that share expression patterns with ZNF271P: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF271P Gene

Orthologs for ZNF271P Gene

Evolution for ZNF271P Gene

ENSEMBL:
Gene Tree for ZNF271P (if available)
TreeFam:
Gene Tree for ZNF271P (if available)

No data available for Orthologs for ZNF271P Gene

Paralogs for ZNF271P Gene

No data available for Paralogs for ZNF271P Gene

Variants for ZNF271P Gene

Sequence variations from dbSNP and Humsavar for ZNF271P Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000157606 -- 35,291,902(+) TCAAT(C/G)TCAAA intron-variant, upstream-variant-2KB
rs1000209521 -- 35,292,223(+) GCCAA(A/G)GCAGG intron-variant, upstream-variant-2KB
rs1000469464 -- 35,305,837(+) CTAGG(C/T)TTCCT intron-variant
rs1000523035 -- 35,306,202(+) GTACA(A/G)GCCTT nc-transcript-variant
rs1000662899 -- 35,303,601(+) CCTAA(A/T)GACTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF271P Gene

Variant ID Type Subtype PubMed ID
esv3642198 CNV loss 21293372
nsv1059793 CNV gain 25217958

Relevant External Links for ZNF271P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF271P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZNF271P Gene

Disorders for ZNF271P Gene

Relevant External Links for ZNF271P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF271P

No disorders were found for ZNF271P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF271P Gene

Publications for ZNF271P Gene

  1. Sustained expression of the novel EBV-induced zinc finger gene, ZNF- EB, is critical for the transition of B lymphocyte activation to oncogenic growth transformation. (PMID: 11777961) Tune C.E. … Dosch H.-M. (J. Immunol. 2002) 2 3 22 64
  2. Isolation of cDNA clones for 42 different Kruppel-related zinc finger proteins expressed in the human monoblast cell line U-937. (PMID: 7865130) Abrink M. … Hellman L. (DNA Cell Biol. 1995) 2 3 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 64

Products for ZNF271P Gene

Sources for ZNF271P Gene

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