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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ZNF264 Gene

protein-coding   GIFtS: 52
GCID: GC19P057702

zinc finger protein 264

 Explore 1 disease affiliated with
ZNF264 via our new
 Human Malady Compendium 
Biological research products
for ZNF264
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Zinc Finger Protein 2641 2
KIAA04121 3

External Ids:    HGNC: 130571   Entrez Gene: 94222   Ensembl: ENSG000000838447   OMIM: 6046685   UniProtKB: O432963   

Export aliases for ZNF264 gene to outside databases

Previous GC identifers: GC19P058601 GC19P058156 GC19P062378 GC19P062394 GC19P054015


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ZNF264:
This gene encodes a zinc finger protein and belongs to the krueppel C2H2-type zinc-finger protein family. Zinc finger
proteins are often localized in the nucleus, bind nucleic acids, and regulate transcription. (provided by RefSeq, Jan
2010)

UniProtKB/Swiss-Prot: ZN264_HUMAN, O43296
Function: May be involved in transcriptional regulation

Gene Wiki entry for ZNF264


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000019.9  NC_018930.1  NT_011109.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ZNF264 gene promoter:
         GATA-3   POU3F2 (N-Oct-5b)   POU3F2 (N-Oct-5a)   POU3F2   Meis-1b   GATA-1   GATA-2   FAC1   Meis-1a   Hlf   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidZNF264 promoter sequence
   Search SABiosciences Chromatin IP Primers for ZNF264

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF264


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 19q13.4   Ensembl cytogenetic band:  19q13.43   HGNC cytogenetic band: 19q13.4

ZNF264 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ZNF264 gene location

GeneLoc information about chromosome 19         GeneLoc Exon Structure

GeneLoc location for GC19P057702:  view genomic region     (about GC identifiers)

Start:
57,702,868 bp from pter      End:
57,734,214 bp from pter
Size:
31,347 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: ZN264_HUMAN, O43296 (See protein sequence)
Recommended Name: Zinc finger protein 264  
Size: 627 amino acids; 70587 Da
Subcellular location: Nucleus (Probable)
Sequence caution: Sequence=BAA24842.2; Type=Erroneous initiation;
Secondary accessions: A8K8Y9 Q9P1V0

Explore the universe of human proteins at neXtProt for ZNF264: NX_O43296

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O43296

  • ZNF264 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_003408.1  
    ENSEMBL proteins: 
     ENSP00000263095   ENSP00000440376  
    Reactome Protein details: O43296
    Human Recombinant Protein Products: 
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    Uscn Proteins for ZNF264

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--


    ZNF264 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    ZNF264 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR015880 Znf_C2H2-like
     IPR001909 Krueppel-associated_box
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR007087 Znf_C2H2

    Graphical View of Domain Structure for InterPro Entry O43296

    ProtoNet protein and cluster: O43296

    2 Blocks protein families:
    IPB001909 KRAB box
    IPB007086 C2H2-type zinc finger signature


    UniProtKB/Swiss-Prot: ZN264_HUMAN, O43296
    Similarity: Belongs to the krueppel C2H2-type zinc-finger protein family
    Similarity: Contains 13 C2H2-type zinc fingers
    Similarity: Contains 1 KRAB domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: ZN264_HUMAN, O43296
    Function: May be involved in transcriptional regulation

         Genatlas biochemistry entry for ZNF264:
    Kruppel-related zinc finger protein 264 ,Kruppel related

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    hsa-miR-4324 hsa-miR-30c hsa-miR-30d hsa-miR-3647-3p hsa-miR-570 hsa-miR-30a hsa-miR-544b hsa-miR-30b
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    Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003677DNA binding IEA--
    GO:0008270zinc ion binding IEA--


    ZNF264 for ontologies           About GeneDecksing



    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Generic Transcription Pathway
    Generic Transcription Pathway1.00
    Gene Expression0.46

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2        Reactome Pathways for ZNF264
        Generic Transcription Pathway
    Gene Expression



    ZNF264 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF264

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    2 Interacting proteins for ZNF264 (ENSP000002630954) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    CBX5ENSP000002098754STRING: ENSP00000209875
    ELAVL1ENSP000003852694STRING: ENSP00000385269
    About this table

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--


    ZNF264 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ZNF264
    Search CenterWatch for drugs/clinical trials and news about ZNF264 / ZN264 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ZNF264 gene: 
    NM_003417.4  

    Unigene Cluster for ZNF264:

    Zinc finger protein 264
    Hs.515634  [show with all ESTs]
    Unigene Representative Sequence: NM_003417
    2 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000263095(uc002qob.3) ENST00000536056

    miRNA
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    8/11 QIAGEN miScript miRNA Assays for microRNAs that regulate ZNF264 (see all 11):
    hsa-miR-4324 hsa-miR-30c hsa-miR-30d hsa-miR-3647-3p hsa-miR-570 hsa-miR-30a hsa-miR-544b hsa-miR-30b
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    Inhib. RNA
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    Additional cDNA sequence: 

    AB007872.1 AK097167.1 AK292504.1 BC115410.2 BC115411.1 

    7 DOTS entries:

    DT.114318  DT.121500227  DT.92419769  DT.121500241  DT.102824483  DT.95139047  DT.95134105 

    24/105 AceView cDNA sequences (see all 105):

    BM693525 F02246 N50396 BQ020432 BU619664 BQ575361 AW976429 BM821845 
    BP354221 Z42777 AA761789 AL047747 BG288543 BF431294 BX953745 AA057422 
    AK097167 AI912679 BG250485 H86268 CA314253 AL699268 CK825398 BM989779 

    GeneLoc Exon Structure

    4 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF264    About this scheme

    ExUns: 1a · 1b · 1c ^ 2a · 2b · 2c ^ 3 ^ 4 ^ 5a · 5b
    SP1:                                -                           
    SP2:                                -     -     -               
    SP3:                                -     -                     
    SP4:                                                            


    ECgene alternative splicing isoforms for ZNF264

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ZNF264 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCTTCAGTGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See ZNF264 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ZNF264

    SOURCE GeneReport for Unigene cluster: Hs.515634

    UniProtKB/Swiss-Prot: ZN264_HUMAN, O43296
    Tissue specificity: Relatively highly expressed in kidney, thymus, testis, ovary, brain, lung, placenta, and prostate,
    and relatively low expression in heart, liver, skeletal muscle, pancreas, spleen, and small intestine

        SABiosciences Custom PCR Arrays for ZNF264
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    In Situ
    Assay Products:
     

     
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section
      --

    ENSEMBL Gene Tree for ZNF264 (if available)
    TreeFam Gene Tree for ZNF264 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ZNF264 gene
    ENSG000002513692  ZNF802  ZNF4602  ZNF5432  ZNF8052  ZNF5992  
    18/490 SIMAP similar genes for ZNF264 using alignment to 6 protein entries:     ZN264_HUMAN (see all proteins) (see all similar genes):
    ZNF805    ZNF543    ZNF818P    kr-znf3    ZNF78L1    ZFS-4
    DKFZp666C237    HZF30    zf30    DKFZp313M0722    HZF16    ZNF323
    ZNF550    ZNF578    DKFZp686H10254    HZF36    ZFP41    ZNF146

    ZNF264 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/696 NCBI SNPs in ZNF264 are shown (see all 696    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 19 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1125276901,2
    --54013474(+) GGATCG/ACTTGA 1 -- us2k11Minor allele frequency- A:0.50CSA 2
    rs736327721,2
    C,F,--54014188(+) GTCTTG/ACTGAC 1 -- us2k12Minor allele frequency- A:0.50WA CSA 4
    rs760715221,2
    C,F,--54014421(+) TTCCAA/CCATTC 1 -- us2k11Minor allele frequency- C:0.05WA 118
    rs58287121,2
    C,--54014431(+) CAGTC-/GTAAGT 1 -- us2k10--------
    rs743801311,2
    --54014503(+) GCCTCC/TGAACC 1 -- us2k11Minor allele frequency- T:0.01NA 120
    rs789867281,2
    F,--54014970(+) TGCGCC/GGTGAA 1 -- us2k11Minor allele frequency- G:0.03WA 118
    rs793746131,2
    F,--54015031(+) CTGTGC/TATTAT 1 -- us2k11Minor allele frequency- T:0.02EA 120
    rs592592121,2
    C,F,--54015387(+) CCACCG/TAGGAG 1 -- ut514Minor allele frequency- T:0.11WA CSA 123
    rs582784811,2
    C,F,--54015740(+) TGGCCG/CTAAGG 1 -- int14Minor allele frequency- C:0.19WA CSA 124
    rs795676671,2
    F,--54016213(+) GGTTCA/GTTGTG 1 -- int11Minor allele frequency- G:0.03NA 120

    HapMap Linkage Disequilibrium report for ZNF264 (57702868 - 57734214 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 6 variations for ZNF264
         4 CNVs: 89349 89351 78301 78300
         2 Indels: 89350 78302

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ZNF264 for disorders           About GeneDecksing

    OMIM gene information: 604668    OMIM disorders: --

    1 disease for ZNF264:    About MalaCards
    prostatitis


    Export disorders for ZNF264 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ZNF264 gene, integrated from 9 sources (see all 14):
    (articles sorted by number of sources associating them with ZNF264)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 9455477)1, 2, 3 Ishikawa K....Ohara O. (1997)
    2. Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)1, 2 Rush J.... Comb M.J. (2005)
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    4. The DNA sequence and biology of human chromosome 19. (PubMed id 15057824)1, 2 Grimwood J.... Lucas S.M. (2004)
    5. Methods for quantification of in vivo changes in prote in ubiquitination following proteasome and deubiquitinase inhibition. (PubMed id 22505724)1 Udeshi N.D....Carr S.A. (2012)
    6. Wnt signaling and Dupuytren's disease. (PubMed id 21732829)1 Dolmans G.H.... . (2011)
    7. Human POGZ modulates dissociation of HP1alpha from mi totic chromosome arms through Aurora B activation. (PubMed id 20562864)1 Nozawa R.S....Obuse C. (2010)
    8. Ubiquitin-mediated proteolysis of HuR by heat shock. (PubMed id 19322201)1 Abdelmohsen K....Gorospe M. (2009)
    9. A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648)2 Dephoure N.... Gygi S.P. (2008)
    10. ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. (PubMed id 17525332)2 Matsuoka S.... Elledge S.J. (2007)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 9422 HGNC: 13057 AceView: ZNF264 Ensembl:ENSG00000083844 euGenes: HUgn9422
    ECgene: ZNF264 H-InvDB: ZNF264

    (According to HUGE)
    About This Section
    HUGE: KIAA0412

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ZNF264 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ZNF264 gene:
    Search GeneIP for patents involving ZNF264

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    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

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    VWF
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    von Willebrand factor
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