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Aliases for ZNF235 Gene

Aliases for ZNF235 Gene

  • Zinc Finger Protein 235 2 3 5
  • Zinc Finger Protein Homologous To Zfp93 In Mouse 2 3
  • Zinc Finger Protein 93 Homolog 3 4
  • Zinc Finger Protein HZF6 3 4
  • Zinc Finger Protein 270 3 4
  • Zfp-93 3 4
  • ZNF270 3 4
  • ZFP93 3 4
  • Zinc Finger Protein Homologous To Mouse Zfp93 3
  • Zinc Finger Protein 6 3
  • ANF270 3
  • HZF6 3

External Ids for ZNF235 Gene

Previous HGNC Symbols for ZNF235 Gene

  • ZNF270
  • ZFP93

Previous GeneCards Identifiers for ZNF235 Gene

  • GC19M045182
  • GC19M049407
  • GC19M049482
  • GC19M049445
  • GC19M044790
  • GC19M041222
  • GC19M044732

Summaries for ZNF235 Gene

Entrez Gene Summary for ZNF235 Gene

  • This gene product belongs to the zinc finger protein superfamily, members of which are regulatory proteins characterized by nucleic acid-binding zinc finger domains. The encoded protein is a member of the Kruppel family of zinc finger proteins, and contains Kruppel-associated box (KRAB) A and B domains and 15 tandemly arrayed C2H2-type zinc fingers. It is an ortholog of the mouse Zfp93 protein. This gene is located in a cluster of zinc finger genes on 19q13.2. [provided by RefSeq, Jul 2008]

GeneCards Summary for ZNF235 Gene

ZNF235 (Zinc Finger Protein 235) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZNF229.

UniProtKB/Swiss-Prot for ZNF235 Gene

  • May be involved in transcriptional regulation.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF235 Gene

Genomics for ZNF235 Gene

Regulatory Elements for ZNF235 Gene

Enhancers for ZNF235 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ZNF235 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF235 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZNF235 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF235 Gene

Chromosome:
19
Start:
44,228,729 bp from pter
End:
44,305,707 bp from pter
Size:
76,979 bases
Orientation:
Minus strand

Genomic View for ZNF235 Gene

Genes around ZNF235 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF235 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF235 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF235 Gene

Proteins for ZNF235 Gene

  • Protein details for ZNF235 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q14590-ZN235_HUMAN
    Recommended name:
    Zinc finger protein 235
    Protein Accession:
    Q14590
    Secondary Accessions:
    • B4DTQ7
    • O14898
    • O14899
    • Q17RR8

    Protein attributes for ZNF235 Gene

    Size:
    738 amino acids
    Molecular mass:
    83977 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF235 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF235 Gene

Proteomics data for ZNF235 Gene at MOPED

Post-translational modifications for ZNF235 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF235 Gene

No data available for DME Specific Peptides for ZNF235 Gene

Domains & Families for ZNF235 Gene

Gene Families for ZNF235 Gene

Protein Domains for ZNF235 Gene

Suggested Antigen Peptide Sequences for ZNF235 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q14590

UniProtKB/Swiss-Prot:

ZN235_HUMAN :
  • Contains 1 KRAB domain.
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 16 C2H2-type zinc fingers.
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 16 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF235: view

Function for ZNF235 Gene

Molecular function for ZNF235 Gene

UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation.
genes like me logo Genes that share phenotypes with ZNF235: view

Animal Model Products

CRISPR Products

miRNA for ZNF235 Gene

miRTarBase miRNAs that target ZNF235

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF235 Gene

Localization for ZNF235 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF235 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF235 Gene COMPARTMENTS Subcellular localization image for ZNF235 gene
Compartment Confidence
nucleus 5
cytosol 2

No data available for Gene Ontology (GO) - Cellular Components for ZNF235 Gene

Pathways & Interactions for ZNF235 Gene

SuperPathways for ZNF235 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF235: view

Pathways by source for ZNF235 Gene

2 Reactome pathways for ZNF235 Gene

Interacting Proteins for ZNF235 Gene

Gene Ontology (GO) - Biological Process for ZNF235 Gene

None

No data available for SIGNOR curated interactions for ZNF235 Gene

Drugs & Compounds for ZNF235 Gene

No Compound Related Data Available

Transcripts for ZNF235 Gene

Unigene Clusters for ZNF235 Gene

Zinc finger protein 235:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF235 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b
SP1: - -
SP2: -
SP3:

Relevant External Links for ZNF235 Gene

GeneLoc Exon Structure for
ZNF235
ECgene alternative splicing isoforms for
ZNF235

Expression for ZNF235 Gene

mRNA expression in normal human tissues for ZNF235 Gene

SOURCE GeneReport for Unigene cluster for ZNF235 Gene Hs.613424

genes like me logo Genes that share expression patterns with ZNF235: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ZNF235 Gene

Orthologs for ZNF235 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ZNF235 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia ZNF235 35
  • 77.09 (n)
  • 81.42 (a)
ZNF235 36
  • 81 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZNF235 35
  • 89.1 (n)
  • 89.42 (a)
ZNF235 36
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp235 35
  • 80.36 (n)
  • 78.17 (a)
Zfp235 16
Zfp108 36
  • 71 (a)
OneToMany
Zfp114 36
  • 70 (a)
OneToMany
Zfp235 36
  • 78 (a)
OneToMany
Zfp93 36
  • 72 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia ZNF235 35
  • 99.37 (n)
  • 99.46 (a)
ZNF235 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC102548230 35
  • 78.52 (n)
  • 76.53 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 45 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 36
  • 40 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 55 (a)
ManyToMany
-- 36
  • 34 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 58 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 58 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 57 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 38 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 57 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 55 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 48 (a)
ManyToMany
-- 36
  • 50 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 53 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 52 (a)
ManyToMany
-- 36
  • 51 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
-- 36
  • 49 (a)
ManyToMany
-- 36
  • 54 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii blf 36
  • 40 (a)
ManyToMany
BX539307.1 36
  • 45 (a)
ManyToMany
CABZ01028403.2 36
  • 54 (a)
ManyToMany
CABZ01057951.1 36
  • 45 (a)
ManyToMany
CABZ01079304.1 36
  • 47 (a)
ManyToMany
CR382372.2 36
  • 48 (a)
ManyToMany
CR388165.1 36
  • 50 (a)
ManyToMany
CR388179.1 36
  • 50 (a)
ManyToMany
CR388206.1 36
  • 48 (a)
ManyToMany
CU302413.2 36
  • 39 (a)
ManyToMany
rnh1 36
  • 34 (a)
ManyToMany
si:ch1073-127d16.1 36
  • 45 (a)
ManyToMany
si:ch211-197e7.2 36
  • 47 (a)
ManyToMany
si:ch211-202h22.10 36
  • 40 (a)
ManyToMany
si:ch73-138e16.3 36
  • 50 (a)
ManyToMany
si:ch73-367f21.4 36
  • 46 (a)
ManyToMany
si:ch73-367f21.6 36
  • 46 (a)
ManyToMany
si:dkey-111k8.6 36
  • 48 (a)
ManyToMany
si:dkey-122c11.10 36
  • 45 (a)
ManyToMany
si:dkey-182i3.10 36
  • 29 (a)
ManyToMany
si:dkey-182i3.9 36
  • 31 (a)
ManyToMany
zgc:162936 36
  • 36 (a)
ManyToMany
zgc:162971 36
  • 42 (a)
ManyToMany
zgc:174700 36
  • 40 (a)
ManyToMany
zgc:194336 36
  • 39 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG18011 36
  • 15 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea C27A12.2 36
  • 20 (a)
ManyToMany
tag-146 36
  • 23 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes AZF1 38
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 47 (a)
ManyToMany
Species with no ortholog for ZNF235:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ZNF235 Gene

ENSEMBL:
Gene Tree for ZNF235 (if available)
TreeFam:
Gene Tree for ZNF235 (if available)

Paralogs for ZNF235 Gene

(529) SIMAP similar genes for ZNF235 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with ZNF235: view

Variants for ZNF235 Gene

Sequence variations from dbSNP and Humsavar for ZNF235 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs2125579 - 44,288,548(+) TCTCA(C/G/T)GTGTA reference, missense
rs7259775 -- 44,302,049(+) ACTTA(C/G)AATTA intron-variant
rs12977120 -- 44,302,934(+) tattt(A/G)tatat intron-variant
rs12977174 -- 44,302,984(+) tattt(A/G)tatat intron-variant
rs12977181 -- 44,302,991(+) atata(A/T)atata intron-variant

Variation tolerance for ZNF235 Gene

Residual Variation Intolerance Score: 35.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.21; 62.05% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF235 Gene

HapMap Linkage Disequilibrium report
ZNF235

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZNF235 Gene

Disorders for ZNF235 Gene

Relevant External Links for ZNF235

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF235

No disorders were found for ZNF235 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF235 Gene

Publications for ZNF235 Gene

  1. Analysis of homologous XRCC1-linked zinc-finger gene families in human and mouse: evidence for orthologous genes. (PMID: 9570955) Shannon M. … Stubbs L. (Genomics 1998) 2 3 4 67
  2. Isolation of cDNA clones for 42 different Kruppel-related zinc finger proteins expressed in the human monoblast cell line U-937. (PMID: 7865130) Abrink M. … Hellman L. (DNA Cell Biol. 1995) 2 3
  3. Maintenance of silent chromatin through replication requires SWI/SNF- like chromatin remodeler SMARCAD1. (PMID: 21549307) Rowbotham S.P. … Mermoud J.E. (Mol. Cell 2011) 3
  4. A directed protein interaction network for investigating intracellular signal transduction. (PMID: 21900206) Vinayagam A. … Wanker E.E. (Sci Signal 2011) 3
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3

Products for ZNF235 Gene

Sources for ZNF235 Gene

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