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Aliases for ZNF233 Gene

Aliases for ZNF233 Gene

  • Zinc Finger Protein 233 2 3

External Ids for ZNF233 Gene

Previous GeneCards Identifiers for ZNF233 Gene

  • GC19U900205
  • GC19P049446
  • GC19P044754
  • GC19P041196

Summaries for ZNF233 Gene

GeneCards Summary for ZNF233 Gene

ZNF233 (Zinc Finger Protein 233) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF155.

UniProtKB/Swiss-Prot for ZNF233 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF233 Gene

Genomics for ZNF233 Gene

Regulatory Elements for ZNF233 Gene

Genomic Location for ZNF233 Gene

Start:
44,259,880 bp from pter
End:
44,275,317 bp from pter
Size:
15,438 bases
Orientation:
Plus strand

Genomic View for ZNF233 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF233 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF233 Gene

Proteins for ZNF233 Gene

  • Protein details for ZNF233 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A6NK53-ZN233_HUMAN
    Recommended name:
    Zinc finger protein 233
    Protein Accession:
    A6NK53
    Secondary Accessions:
    • B2RN78
    • B2RN79
    • Q86WL8

    Protein attributes for ZNF233 Gene

    Size:
    670 amino acids
    Molecular mass:
    76861 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZNF233 Gene

Proteomics data for ZNF233 Gene at MOPED

Post-translational modifications for ZNF233 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF233 Gene

No data available for DME Specific Peptides for ZNF233 Gene

Domains for ZNF233 Gene

Gene Families for ZNF233 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZNF233 Gene

Suggested Antigen Peptide Sequences for ZNF233 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A6NK53

UniProtKB/Swiss-Prot:

ZN233_HUMAN :
  • A6NK53
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 12 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF233: view

Function for ZNF233 Gene

Molecular function for ZNF233 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF233 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF233: view

Animal Model Products

CRISPR Products

miRNA for ZNF233 Gene

miRTarBase miRNAs that target ZNF233

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF233

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZNF233 Gene

Localization for ZNF233 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF233 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF233 Gene COMPARTMENTS Subcellular localization image for ZNF233 gene
Compartment Confidence
nucleus 4
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF233 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF233: view

Pathways for ZNF233 Gene

SuperPathways for ZNF233 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF233: view

Pathways by source for ZNF233 Gene

2 Reactome pathways for ZNF233 Gene

Gene Ontology (GO) - Biological Process for ZNF233 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF233: view

Transcripts for ZNF233 Gene

Unigene Clusters for ZNF233 Gene

Zinc finger protein 233:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF233

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for ZNF233
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF233 Gene

No ASD Table

Relevant External Links for ZNF233 Gene

GeneLoc Exon Structure for
ZNF233
ECgene alternative splicing isoforms for
ZNF233

Expression for ZNF233 Gene

mRNA expression in normal human tissues for ZNF233 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF233 Gene

SOURCE GeneReport for Unigene cluster for ZNF233 Gene Hs.466891

genes like me logo Genes that share expressions with ZNF233: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF233 Gene

Orthologs for ZNF233 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF233 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF233 36
  • 74 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp111 36
  • 41 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 41 (a)
ManyToMany
chicken
(Gallus gallus)
Aves -- 36
  • 41 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 44 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii zgc:162972 36
  • 35 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta CG4360 36
  • 23 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea C27A12.2 36
  • 16 (a)
ManyToMany
tag-146 36
  • 19 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 36 (a)
ManyToMany
Species with no ortholog for ZNF233:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ZNF233 Gene

ENSEMBL:
Gene Tree for ZNF233 (if available)
TreeFam:
Gene Tree for ZNF233 (if available)

Paralogs for ZNF233 Gene

Selected SIMAP similar genes for ZNF233 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with ZNF233: view

Variants for ZNF233 Gene

Sequence variations from dbSNP and Humsavar for ZNF233 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs1233428 - 44,274,252(+) TCACA(A/C)AGGAG reference, missense
rs1233429 -- 44,275,497(+) GAGCT(A/T)GTGTG downstream-variant-500B
rs1233430 -- 44,275,635(+) AAGGA(A/C)ACAGC downstream-variant-500B
rs1233435 -- 44,271,532(-) actcc(A/G)tctca intron-variant
rs1233436 -- 44,271,102(-) GAAAA(C/T)TTATT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF233 Gene

Variant ID Type Subtype PubMed ID
nsv521923 CNV Loss 19592680

Relevant External Links for ZNF233 Gene

HapMap Linkage Disequilibrium report
ZNF233
Human Gene Mutation Database (HGMD)
ZNF233

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF233 Gene

Disorders for ZNF233 Gene

(1) University of Copenhagen DISEASES for ZNF233 Gene

genes like me logo Genes that share disorders with ZNF233: view

No data available for UniProtKB/Swiss-Prot for ZNF233 Gene

Publications for ZNF233 Gene

  1. Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters. (PMID: 12743021) Shannon M. … Stubbs L. (Genome Res. 2003) 2 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Toward a confocal subcellular atlas of the human proteome. (PMID: 18029348) Barbe L. … Andersson-Svahn H. (Mol. Cell Proteomics 2008) 3
  5. Comparison of an expanded ataxia interactome with patient medical records reveals a relationship between macular degeneration and ataxia. (PMID: 21078624) Kahle J.J. … Zoghbi H.Y. (Hum. Mol. Genet. 2011) 3

Products for ZNF233 Gene

Sources for ZNF233 Gene

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