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Aliases for ZNF232 Gene

Aliases for ZNF232 Gene

  • Zinc Finger Protein 232 2 3
  • Zinc Finger And SCAN Domain-Containing Protein 11 3 4
  • ZSCAN11 3 4

External Ids for ZNF232 Gene

Summaries for ZNF232 Gene

GeneCards Summary for ZNF232 Gene

ZNF232 (Zinc Finger Protein 232) is a Protein Coding gene. GO annotations related to this gene include sequence-specific DNA binding transcription factor activity. An important paralog of this gene is ZNF396.

UniProtKB/Swiss-Prot for ZNF232 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF232 Gene

Genomics for ZNF232 Gene

Genomic Location for ZNF232 Gene

Start:
5,105,541 bp from pter
End:
5,123,116 bp from pter
Size:
17,576 bases
Orientation:
Minus strand

Genomic View for ZNF232 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF232 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF232 Gene

Regulatory Elements for ZNF232 Gene

Proteins for ZNF232 Gene

  • Protein details for ZNF232 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UNY5-ZN232_HUMAN
    Recommended name:
    Zinc finger protein 232
    Protein Accession:
    Q9UNY5
    Secondary Accessions:

    Protein attributes for ZNF232 Gene

    Size:
    417 amino acids
    Molecular mass:
    47688 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH16039.2; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF232 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF232 Gene

Proteomics data for ZNF232 Gene at MOPED

Post-translational modifications for ZNF232 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF232 Gene

No data available for DME Specific Peptides for ZNF232 Gene

Domains for ZNF232 Gene

Gene Families for ZNF232 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

UniProtKB/Swiss-Prot:

ZN232_HUMAN
Domain:
  • Contains 1 SCAN box domain.:
    • Q9UNY5
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q9UNY5
Similarity:
  • Contains 5 C2H2-type zinc fingers.:
    • Q9UNY5
genes like me logo Genes that share domains with ZNF232: view

Function for ZNF232 Gene

Molecular function for ZNF232 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IEA --
GO:0005515 protein binding IPI 16189514
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF232: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF232 Gene

Localization for ZNF232 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF232 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF232 Gene COMPARTMENTS Subcellular localization image for ZNF232 gene
Compartment Confidence
nucleus 5

Gene Ontology (GO) - Cellular Components for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF232: view

Pathways for ZNF232 Gene

SuperPathways for ZNF232 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZNF232 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZNF232: view

No data available for Pathways by source for ZNF232 Gene

Transcripts for ZNF232 Gene

Unigene Clusters for ZNF232 Gene

Zinc finger protein 232:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF232 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d ^ 6a · 6b ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b · 9c
SP1: - - -
SP2: - - - -
SP3: - - -
SP4:
SP5: -
SP6: -
SP7:
SP8: - -
SP9: -

Relevant External Links for ZNF232 Gene

GeneLoc Exon Structure for
ZNF232
ECgene alternative splicing isoforms for
ZNF232

Expression for ZNF232 Gene

mRNA expression in normal human tissues for ZNF232 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZNF232 Gene

SOURCE GeneReport for Unigene cluster for ZNF232 Gene Hs.279914

mRNA Expression by UniProt/SwissProt for ZNF232 Gene

Q9UNY5-ZN232_HUMAN
Tissue specificity: Ubiquitous. Higher expression seen in the liver, testis and ovary
genes like me logo Genes that share expressions with ZNF232: view

Orthologs for ZNF232 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZNF232 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF232 36
  • 99.62 (n)
  • 99.55 (a)
ZNF232 37
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia -- 37
  • 29 (a)
OneToMany
-- 37
  • 51 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 36 (a)
ManyToMany
Species with no ortholog for ZNF232:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF232 Gene

ENSEMBL:
Gene Tree for ZNF232 (if available)
TreeFam:
Gene Tree for ZNF232 (if available)

Paralogs for ZNF232 Gene

Selected SIMAP similar genes for ZNF232 Gene using alignment to 4 proteins:

Pseudogenes.org Pseudogenes for ZNF232 Gene

genes like me logo Genes that share paralogs with ZNF232: view

Variants for ZNF232 Gene

Sequence variations from dbSNP and Humsavar for ZNF232 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type MAF
rs3893993 -- 5,119,344(+) CATTA(C/G)TACAT intron-variant
rs3930860 -- 5,121,124(+) AGCAA(C/T)AGGTG intron-variant
rs3931085 -- 5,118,187(+) TATTT(C/T)CTATT intron-variant
rs4076450 -- 5,119,565(-) GCATC(C/T)ATAAA intron-variant
rs4318270 -- 5,117,284(+) aggcc(A/G)aggcg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF232 Gene

Variant ID Type Subtype PubMed ID
nsv907620 CNV Loss 21882294
nsv907623 CNV Loss 21882294
nsv907624 CNV Loss 21882294
esv25210 CNV Gain 19812545

Relevant External Links for ZNF232 Gene

HapMap Linkage Disequilibrium report
ZNF232

Disorders for ZNF232 Gene

(1) University of Copenhagen DISEASES for ZNF232 Gene

genes like me logo Genes that share disorders with ZNF232: view

No data available for UniProtKB/Swiss-Prot for ZNF232 Gene

Publications for ZNF232 Gene

  1. ZNF232: structure and expression analysis of a novel human C(2)H(2) zinc finger gene, member of the SCAN/LeR domain subfamily. (PMID: 11311944) Mavrogiannis L.A. … Moschonas N.K. (Biochim. Biophys. Acta 2001) 2 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  4. An atlas of combinatorial transcriptional regulation in mouse and man. (PMID: 20211142) Ravasi T. … Hayashizaki Y. (Cell 2010) 3
  5. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3

Products for ZNF232 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZNF232
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZNF232
    • Block miRNA regulation of ZNF232 using miScript Target Protectors

    Sources for ZNF232 Gene

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