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Aliases for ZNF229 Gene

Aliases for ZNF229 Gene

  • Zinc Finger Protein 229 2 3

External Ids for ZNF229 Gene

Summaries for ZNF229 Gene

GeneCards Summary for ZNF229 Gene

ZNF229 (Zinc Finger Protein 229) is a Protein Coding gene.

UniProtKB/Swiss-Prot for ZNF229 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF229 Gene

Genomics for ZNF229 Gene

Genomic Location for ZNF229 Gene

Start:
44,417,519 bp from pter
End:
44,448,578 bp from pter
Size:
31,060 bases
Orientation:
Minus strand

Genomic View for ZNF229 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZNF229 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF229 Gene

Regulatory Elements for ZNF229 Gene

Transcription factor binding sites by QIAGEN in the ZNF229 gene promoter:

Proteins for ZNF229 Gene

  • Protein details for ZNF229 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9UJW7-ZN229_HUMAN
    Recommended name:
    Zinc finger protein 229
    Protein Accession:
    Q9UJW7
    Secondary Accessions:
    • B2RWN3
    • Q59FV2
    • Q86WL9

    Protein attributes for ZNF229 Gene

    Size:
    825 amino acids
    Molecular mass:
    93707 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAG23970.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for ZNF229 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF229 Gene

Proteomics data for ZNF229 Gene at MOPED

Post-translational modifications for ZNF229 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZNF229 Gene

No data available for DME Specific Peptides for ZNF229 Gene

Domains for ZNF229 Gene

Gene Families for ZNF229 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

UniProtKB/Swiss-Prot:

ZN229_HUMAN
Domain:
  • Contains 1 KRAB domain.:
    • Q9UJW7
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.:
    • Q9UJW7
Similarity:
  • Contains 18 C2H2-type zinc fingers.:
    • Q9UJW7
genes like me logo Genes that share domains with ZNF229: view

Function for ZNF229 Gene

Molecular function for ZNF229 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZNF229 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZNF229: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZNF229 Gene

Localization for ZNF229 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF229 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF229 Gene COMPARTMENTS Subcellular localization image for ZNF229 gene
Compartment Confidence
nucleus 4
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ZNF229 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZNF229: view

Pathways for ZNF229 Gene

SuperPathways for ZNF229 Gene

No Data Available

Interacting Proteins for ZNF229 Gene

Gene Ontology (GO) - Biological Process for ZNF229 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZNF229: view

No data available for Pathways by source for ZNF229 Gene

Transcripts for ZNF229 Gene

mRNA/cDNA for ZNF229 Gene

(4) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZNF229 Gene

Zinc finger protein 229:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF229 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6
SP1: -
SP2:
SP3: -

Relevant External Links for ZNF229 Gene

GeneLoc Exon Structure for
ZNF229
ECgene alternative splicing isoforms for
ZNF229

Expression for ZNF229 Gene

mRNA expression in normal human tissues for ZNF229 Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ZNF229 Gene

SOURCE GeneReport for Unigene cluster for ZNF229 Gene Hs.709348

genes like me logo Genes that share expressions with ZNF229: view

Orthologs for ZNF229 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZNF229 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZNF229 36
  • 90.41 (n)
  • 86.99 (a)
dog
(Canis familiaris)
Mammalia ZNF229 36
  • 80.71 (n)
  • 77.09 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7963 38
  • 32 (a)
CG10274 38
  • 40 (a)
Species with no ortholog for ZNF229:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF229 Gene

ENSEMBL:
Gene Tree for ZNF229 (if available)
TreeFam:
Gene Tree for ZNF229 (if available)

Paralogs for ZNF229 Gene

Selected SIMAP similar genes for ZNF229 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZNF229: view

No data available for Paralogs for ZNF229 Gene

Variants for ZNF229 Gene

Sequence variations from dbSNP and Humsavar for ZNF229 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs204543 -- 44,450,072(-) TCATT(A/C/G/T)AATTA upstream-variant-2KB
rs204544 -- 44,449,585(-) ATGCC(A/G)TTTAA upstream-variant-2KB
rs204545 -- 44,443,403(-) TCCCT(A/G)AGTAT intron-variant
rs204546 -- 44,443,013(-) TGACC(A/G)TGGGA utr-variant-5-prime, nc-transcript-variant
rs204547 -- 44,443,000(-) CAGTC(A/G)CGCTC utr-variant-5-prime, nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF229 Gene

Variant ID Type Subtype PubMed ID
nsv515911 CNV Loss 19592680
dgv3944n71 CNV Loss 21882294
esv2663330 CNV Deletion 23128226
nsv9734 CNV Gain+Loss 18304495
dgv1106e1 CNV Complex 17122850
esv2421963 CNV Deletion 20811451
nsv442465 CNV CNV 18776908
nsv817849 CNV Loss 17921354
esv6503 OTHER Inversion 19470904
esv26773 CNV Loss 19812545

Relevant External Links for ZNF229 Gene

HapMap Linkage Disequilibrium report
ZNF229

Disorders for ZNF229 Gene

Relevant External Links for ZNF229

Genetic Association Database (GAD)
ZNF229
genes like me logo Genes that share disorders with ZNF229: view

No data available for UniProtKB/Swiss-Prot for ZNF229 Gene

Publications for ZNF229 Gene

  1. Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters. (PMID: 12743021) Shannon M. … Stubbs L. (Genome Res. 2003) 3 4
  2. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4
  3. Genome-wide association analyses identifies a susceptibility locus for tuberculosis on chromosome 18q11.2. (PMID: 20694014) Thye T. … Hill A.V. (Nat. Genet. 2010) 3 49
  4. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3
  5. Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition. (PMID: 22505724) Udeshi N.D. … Carr S.A. (Mol. Cell Proteomics 2012) 3

Products for ZNF229 Gene

Sources for ZNF229 Gene

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