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Aliases for ZNF197-AS1 Gene

Subcategory (RNA class) for ZNF197-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF197-AS1 Gene

  • ZNF197 Antisense RNA 1 2 3 5
  • ZNF197 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZNF197-AS1 Gene

Previous GeneCards Identifiers for ZNF197-AS1 Gene

  • GC00U933426

Summaries for ZNF197-AS1 Gene

GeneCards Summary for ZNF197-AS1 Gene

ZNF197-AS1 (ZNF197 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF197-AS1 Gene

Genomics for ZNF197-AS1 Gene

Regulatory Elements for ZNF197-AS1 Gene

Enhancers for ZNF197-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F045130 1.7 FANTOM5 Ensembl ENCODE 11.4 -511.2 -511195 11.1 HDGF PKNOX1 ARNT CREB3L1 SIN3A FEZF1 CBX5 FOS KLF13 JUNB SACM1L ZNF660 ZNF502 ENSG00000272077 LINC00694 ZNF197-AS1 ZKSCAN7 ZNF501 RNU5B-3P CLEC3B
GH03F045177 1.1 Ensembl ENCODE 11.4 -553.7 -553714 1.0 CTCF KLF1 INSM2 KLF17 FEZF1 ZIC2 FOSL1 GLIS2 ZBTB48 ZNF366 ZNF660 ZNF502 ENSG00000272077 ZNF197-AS1 SACM1L ZKSCAN7 ZNF501 CDCP1 SLC6A20 RPS24P8
GH03F045034 0.8 ENCODE 11.4 -411.1 -411126 2.2 HDGF HDAC1 ATF1 HINFP GTF2E2 DDX20 ZNF644 RELA IRF9 ZFHX2 EXOSC7 ZNF660 ZNF502 ENSG00000272077 CLEC3B ZNF197-AS1 SACM1L ZKSCAN7 ZNF501 CDCP1
GH03F044584 0.8 ENCODE 10.9 +39.8 39810 1.7 SAP130 GTF2E2 SIN3A ARID4B MAX ETS1 POLR2A NFYB ZNF143 ZNF207 ZNF197 ZNF197-AS1 ZKSCAN7 ZNF501 ZNF35 PIR39553
GH03F045077 0.6 Ensembl 11.4 -452.3 -452304 0.6 POLR2H PKNOX1 ZNF585B PBX2 MLLT1 ZNF660 ZNF502 ENSG00000272077 ZNF197-AS1 SACM1L ZKSCAN7 ZNF501 LOC105377059 CDCP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZNF197-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001478686 -504 2200 ATF1 PKNOX1 ARNT CREB3L1 ARID4B SIN3A ETS1 YY1 CBX5 ELK1

Genomic Location for ZNF197-AS1 Gene

Chromosome:
3
Start:
44,617,128 bp from pter
End:
44,624,797 bp from pter
Size:
7,670 bases
Orientation:
Minus strand

Genomic View for ZNF197-AS1 Gene

Genes around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF197-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF197-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF197-AS1 Gene

Proteins for ZNF197-AS1 Gene

Post-translational modifications for ZNF197-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF197-AS1 Gene

Domains & Families for ZNF197-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF197-AS1 Gene

Function for ZNF197-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF197-AS1 Gene

Localization for ZNF197-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZNF197-AS1 Gene

Pathways & Interactions for ZNF197-AS1 Gene

SuperPathways for ZNF197-AS1 Gene

No Data Available

Interacting Proteins for ZNF197-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF197-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF197-AS1 Gene

Transcripts for ZNF197-AS1 Gene

mRNA/cDNA for ZNF197-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF197-AS1 Gene

No ASD Table

Relevant External Links for ZNF197-AS1 Gene

GeneLoc Exon Structure for
ZNF197-AS1
ECgene alternative splicing isoforms for
ZNF197-AS1

Expression for ZNF197-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZNF197-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF197-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZNF197-AS1 Gene

Orthologs for ZNF197-AS1 Gene

Evolution for ZNF197-AS1 Gene

ENSEMBL:
Gene Tree for ZNF197-AS1 (if available)
TreeFam:
Gene Tree for ZNF197-AS1 (if available)

No data available for Orthologs for ZNF197-AS1 Gene

Paralogs for ZNF197-AS1 Gene

No data available for Paralogs for ZNF197-AS1 Gene

Variants for ZNF197-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF197-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10212378 -- 44,625,794(+) CATTG(C/G)CAACC intron-variant, upstream-variant-2KB
rs112460311 -- 44,623,214(+) TGGGC(A/G)ACAGA intron-variant, upstream-variant-2KB
rs113130414 -- 44,619,019(+) AAGGT(A/C/T)GAAAG intron-variant
rs113502578 -- 44,621,488(+) GGCTT(A/T)ACCCC intron-variant
rs113583963 -- 44,626,299(+) CCCCC(A/G)CCATT intron-variant, upstream-variant-2KB

Relevant External Links for ZNF197-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF197-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF197-AS1 Gene

Disorders for ZNF197-AS1 Gene

Relevant External Links for ZNF197-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF197-AS1

No disorders were found for ZNF197-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF197-AS1 Gene

Publications for ZNF197-AS1 Gene

No publications were found for ZNF197-AS1 Gene.

Products for ZNF197-AS1 Gene

Sources for ZNF197-AS1 Gene

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