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Aliases for ZNF197-AS1 Gene

Subcategory (RNA class) for ZNF197-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF197-AS1 Gene

  • ZNF197 Antisense RNA 1 2 3 5
  • ZNF197 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZNF197-AS1 Gene

Previous GeneCards Identifiers for ZNF197-AS1 Gene

  • GC00U933426

Summaries for ZNF197-AS1 Gene

GeneCards Summary for ZNF197-AS1 Gene

ZNF197-AS1 (ZNF197 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF197-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF197-AS1 Gene

Genomics for ZNF197-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZNF197-AS1 Gene

Promoters and enhancers for ZNF197-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I044624 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 550.8 -0.5 -500 2.2 PKNOX1 ARNT ARID4B SIN3A YY1 POLR2B ZNF766 CBX5 E2F8 ZNF143 ZNF197 ZNF197-AS1 ZNF35 ZNF852 KIAA1143 ZNF660 ZDHHC3 ZNF502 ZNF445 ENSG00000236869
GH03I044584 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 10.9 +39.8 39810 1.7 MXI1 FOXA2 SAP130 ARID4B SIN3A KLF5 ETS1 POLR2A VEZF1 ZNF207 ZNF197 ZNF660 ZNF197-AS1 ZKSCAN7 ZNF501 ZNF35 PIR39553 ENSG00000236869
GH03I045177 Enhancer 0.9 ENCODE dbSUPER 11 -553.7 -553713 1 KLF1 ZBTB6 INSM2 KLF17 FEZF1 ZIC2 ZNF335 GLIS2 ZNF366 ZBTB48 ZNF660 ZNF197 ZNF502 ENSG00000272077 SACM1L ZKSCAN7 LZTFL1 ZNF197-AS1 ZNF501 CDCP1
GH03I044825 Enhancer 0.4 ENCODE 11 -201.0 -200997 0.2 RCOR1 FOS SPI1 ZNF197-AS1 ZNF197 HNRNPA1P77 KIF15
GH03I044602 Enhancer 0.2 FANTOM5 11.7 +22.2 22192 0.3 ZNF197-AS1 ZNF445 ZKSCAN7 ZNF501 ZNF660 ZNF35 ZNF197 PIR39553 ENSG00000236869
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZNF197-AS1 Gene

Genomic Locations for ZNF197-AS1 Gene
chr3:44,617,128-44,624,797
(GRCh38/hg38)
Size:
7,670 bases
Orientation:
Minus strand
chr3:44,658,620-44,666,289
(GRCh37/hg19)

Genomic View for ZNF197-AS1 Gene

Genes around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF197-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF197-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF197-AS1 Gene

Proteins for ZNF197-AS1 Gene

Post-translational modifications for ZNF197-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF197-AS1 Gene

Domains & Families for ZNF197-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF197-AS1 Gene

Function for ZNF197-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF197-AS1 Gene

Localization for ZNF197-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF197-AS1 Gene

Pathways & Interactions for ZNF197-AS1 Gene

SuperPathways for ZNF197-AS1 Gene

No Data Available

Interacting Proteins for ZNF197-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF197-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF197-AS1 Gene

Drugs & Compounds for ZNF197-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF197-AS1 Gene

mRNA/cDNA for ZNF197-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF197-AS1 Gene

No ASD Table

Relevant External Links for ZNF197-AS1 Gene

GeneLoc Exon Structure for
ZNF197-AS1
ECgene alternative splicing isoforms for
ZNF197-AS1

Expression for ZNF197-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF197-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF197-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF197-AS1 Gene

Orthologs for ZNF197-AS1 Gene

Evolution for ZNF197-AS1 Gene

ENSEMBL:
Gene Tree for ZNF197-AS1 (if available)
TreeFam:
Gene Tree for ZNF197-AS1 (if available)

No data available for Orthologs for ZNF197-AS1 Gene

Paralogs for ZNF197-AS1 Gene

No data available for Paralogs for ZNF197-AS1 Gene

Variants for ZNF197-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF197-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000225811 -- 44,618,903(-) A/C intron_variant
rs1000597474 -- 44,625,127(-) C/T upstream_transcript_variant
rs1000939948 -- 44,617,170(-) G/A non_coding_transcript_variant
rs1001096334 -- 44,625,942(-) T/G upstream_transcript_variant
rs1001581910 -- 44,625,797(-) A/G upstream_transcript_variant

Additional Variant Information for ZNF197-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF197-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF197-AS1 Gene

Disorders for ZNF197-AS1 Gene

Additional Disease Information for ZNF197-AS1

No disorders were found for ZNF197-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF197-AS1 Gene

Publications for ZNF197-AS1 Gene

No publications were found for ZNF197-AS1 Gene.

Products for ZNF197-AS1 Gene

Sources for ZNF197-AS1 Gene

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