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Aliases for ZNF197-AS1 Gene

Subcategory (RNA class) for ZNF197-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZNF197-AS1 Gene

  • ZNF197 Antisense RNA 1 2 3 5
  • ZNF197 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZNF197-AS1 Gene

Previous GeneCards Identifiers for ZNF197-AS1 Gene

  • GC00U933426

Summaries for ZNF197-AS1 Gene

GeneCards Summary for ZNF197-AS1 Gene

ZNF197-AS1 (ZNF197 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZNF197-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF197-AS1 Gene

Genomics for ZNF197-AS1 Gene

Regulatory Elements for ZNF197-AS1 Gene

Enhancers for ZNF197-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H045177 1 ENCODE dbSUPER 11 -553.7 -553714 1 KLF1 INSM2 KLF17 FEZF1 ZIC2 GLIS2 ZNF366 ZBTB48 PATZ1 ZNF600 ZNF660 ZNF197 ZNF502 ENSG00000272077 SACM1L ZKSCAN7 LZTFL1 ZNF197-AS1 ZNF501 CDCP1
GH03H044584 0.8 ENCODE 10.9 +39.8 39810 1 MXI1 FOXA2 TBL1XR1 SAP130 MAX SIN3A ARID4B ETS1 POLR2A ZNF143 ZNF197 ZNF197-AS1 ZKSCAN7 ZNF501 ZNF35 PIR39553
GH03H044825 0.5 ENCODE 11 -201.0 -200997 0 FOS RCOR1 SPI1 ZNF197-AS1 ZNF197 HNRNPA1P77 KIF15
GH03H044602 0.3 FANTOM5 11.7 +22.2 22193 0 ZNF197-AS1 ZNF445 ZKSCAN7 ZNF501 ZNF660 ZNF35 ZNF197 PIR39553
GH03H044624 1.1 ENCODE 0.7 -0.5 -537 2 PKNOX1 ARNT SIN3A ARID4B YY1 ZNF766 CBX5 ZNF143 SP3 ZHX2 ZNF197 ZNF35 ZNF852 KIAA1143 ZNF660 ZDHHC3 ZNF502 ZNF445 ZNF197-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF197-AS1 Gene

Chromosome:
3
Start:
44,617,128 bp from pter
End:
44,624,797 bp from pter
Size:
7,670 bases
Orientation:
Minus strand

Genomic View for ZNF197-AS1 Gene

Genes around ZNF197-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF197-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF197-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF197-AS1 Gene

Proteins for ZNF197-AS1 Gene

Post-translational modifications for ZNF197-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZNF197-AS1 Gene

Domains & Families for ZNF197-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZNF197-AS1 Gene

Function for ZNF197-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ZNF197-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZNF197-AS1 Gene

Localization for ZNF197-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZNF197-AS1 Gene

Pathways & Interactions for ZNF197-AS1 Gene

SuperPathways for ZNF197-AS1 Gene

No Data Available

Interacting Proteins for ZNF197-AS1 Gene

Gene Ontology (GO) - Biological Process for ZNF197-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZNF197-AS1 Gene

Drugs & Compounds for ZNF197-AS1 Gene

No Compound Related Data Available

Transcripts for ZNF197-AS1 Gene

mRNA/cDNA for ZNF197-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for ZNF197-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF197-AS1 Gene

No ASD Table

Relevant External Links for ZNF197-AS1 Gene

GeneLoc Exon Structure for
ZNF197-AS1
ECgene alternative splicing isoforms for
ZNF197-AS1

Expression for ZNF197-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZNF197-AS1 Gene

genes like me logo Genes that share expression patterns with ZNF197-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZNF197-AS1 Gene

Orthologs for ZNF197-AS1 Gene

Evolution for ZNF197-AS1 Gene

ENSEMBL:
Gene Tree for ZNF197-AS1 (if available)
TreeFam:
Gene Tree for ZNF197-AS1 (if available)

No data available for Orthologs for ZNF197-AS1 Gene

Paralogs for ZNF197-AS1 Gene

No data available for Paralogs for ZNF197-AS1 Gene

Variants for ZNF197-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZNF197-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000225811 -- 44,618,903(+) TTATA(A/C)GTTTA intron-variant
rs1000597474 -- 44,625,127(+) GGAGC(C/T)GCAGC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000939948 -- 44,617,170(+) GGTAT(A/G)CACTC nc-transcript-variant
rs1001096334 -- 44,625,942(+) TTGTT(G/T)TGGAC intron-variant, upstream-variant-2KB
rs1001581910 -- 44,625,797(+) TGCCA(A/G)CCTGT intron-variant, upstream-variant-2KB

Relevant External Links for ZNF197-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZNF197-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZNF197-AS1 Gene

Disorders for ZNF197-AS1 Gene

Relevant External Links for ZNF197-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF197-AS1

No disorders were found for ZNF197-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF197-AS1 Gene

Publications for ZNF197-AS1 Gene

No publications were found for ZNF197-AS1 Gene.

Products for ZNF197-AS1 Gene

Sources for ZNF197-AS1 Gene

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