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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ZNF182 Gene

protein-coding   GIFtS: 51
GCID: GC0XM047834

Zinc Finger Protein 182

(Previous names: zinc finger protein 182 (HHZ150), zinc finger protein 21...)
(Previous symbol: ZNF21)
  See related diseases
at  

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
About This Section

Aliases
Zinc Finger Protein 1821 2     Zinc Finger Protein 182 (HHZ150)1
ZNF211 2 3 5     HHZ1502
Zinc Finger Protein 21 (KOX 14)1 2     Zfp1822
Zinc Finger Protein KOX142 3     Zinc Finger Protein 213
KOX142 3     

External Ids:    HGNC: 130011   Entrez Gene: 75692   Ensembl: ENSG000001471187   OMIM: 3149935   UniProtKB: P170253   

Export aliases for ZNF182 gene to outside databases

Previous GC identifers: GC00U990427 GC0XM047719 GC0XM045547


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ZNF182 Gene:
Zinc-finger proteins bind nucleic acids and play important roles in various cellular functions, including cell
proliferation, differentiation, and apoptosis. This gene encodes a zinc finger protein, and belongs to the
krueppel C2H2-type zinc-finger protein family. It may be involved in transcriptional regulation. Multiple
alternatively spliced transcript variants encoding different isoforms have been identified. (provided by RefSeq,
May 2010)

GeneCards Summary for ZNF182 Gene: 
ZNF182 (zinc finger protein 182) is a protein-coding gene. Diseases associated with ZNF182 include aland island eye disease, and eye disease. GO annotations related to this gene include DNA binding and zinc ion binding. An important paralog of this gene is ZNF334.

UniProtKB/Swiss-Prot: ZN182_HUMAN, P17025
Function: May be involved in transcriptional regulation

Gene Wiki entry for ZNF182 Gene


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 73), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000023.10  NT_079573.4  NC_018934.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ZNF182 gene promoter:
         Nkx3-1   ISGF-3   Nkx3-1 v4   AML1a   Nkx3-1 v1   Evi-1   Nkx3-1 v2   IRF-7A   Nkx3-1 v3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidZNF182 promoter sequence
   Search SABiosciences Chromatin IP Primers for ZNF182

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF182


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: Xp11.23   Ensembl cytogenetic band:  Xp11.23   HGNC cytogenetic band: Xp11.23

ZNF182 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ZNF182 gene location

GeneLoc information about chromosome X         GeneLoc Exon Structure

GeneLoc location for GC0XM047834:  view genomic region     (about GC identifiers)

Start:
47,834,250 bp from pter      End:
47,863,394 bp from pter
Size:
29,145 bases      Orientation:
minus strand

(According to UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MAXQB RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Cloud-Clone Corp.,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Cloud-Clone Corp., Ontologies according to Gene Ontology Consortium 01 Oct 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, and/or Cloud-Clone Corp.)
About This Section

UniProtKB/Swiss-Prot: ZN182_HUMAN, P17025 (See protein sequence)
Recommended Name: Zinc finger protein 182  
Size: 639 amino acids; 73646 Da
Subcellular location: Nucleus (Potential)
Secondary accessions: A2IDD7 Q3KP67 Q96QH7
Alternative splicing: 2 isoforms:  P17025-1   P17025-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for ZNF182: NX_P17025

Explore proteomics data for ZNF182 at MOPED 

Post-translational modifications:

  • View modification sites using PhosphoSitePlus
  • View neXtProt modification sites for NX_P17025

  • ZNF182 Protein expression data from MOPED1, PaxDb2 and MAXQB3 :    About this image 

    ZNF182 Protein Expression
    REFSEQ proteins (3 alternative transcripts): 
    NP_001007089.1  NP_001171570.1  NP_008893.1  

    ENSEMBL proteins: 
     ENSP00000366142   ENSP00000380165   ENSP00000306351  

    Human Recombinant Protein Products for ZNF182: 
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    Novus Biologicals ZNF182 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates 
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for ZNF182 

    Gene Ontology (GO): 2 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005634nucleus IEA--

    ZNF182 for ontologies           About GeneDecksing



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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section
    HGNC Gene Families: 
    ZNF: Zinc fingers, C2H2-type

    4 InterPro protein domains:
     IPR015880 Znf_C2H2-like
     IPR001909 Krueppel-associated_box
     IPR013087 Znf_C2H2/integrase_DNA-bd
     IPR007087 Znf_C2H2

    Graphical View of Domain Structure for InterPro Entry P17025

    ProtoNet protein and cluster: P17025

    1 Blocks protein domain: IPB001909 KRAB box

    UniProtKB/Swiss-Prot: ZN182_HUMAN, P17025
    Similarity: Belongs to the krueppel C2H2-type zinc-finger protein family
    Similarity: Contains 15 C2H2-type zinc fingers
    Similarity: Contains 1 KRAB domain


    ZNF182 for domains           About GeneDecksing


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, Vector BioLabs, and Sirion Biotech, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: ZN182_HUMAN, P17025
    Function: May be involved in transcriptional regulation

         Genatlas biochemistry entry for ZNF182:
    zinc finger 182,C2H2 type,Kruppel-like,Krab subfamily,involved in differentiation and development of heart

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003676nucleic acid binding ----
    GO:0003677DNA binding IEA--
    GO:0008270zinc ion binding ----
    GO:0046872metal ion binding IEA--
         
    ZNF182 for ontologies           About GeneDecksing


    Phenotypes:
         1 GenomeRNAi human phenotype for ZNF182:
     Decreased p24 protein expressi 

    Animal Models:
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    SwitchGear 3'UTR luciferase reporter plasmidZNF182 3' UTR sequence
    Inhib. RNA
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF182


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Oct 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF182

    Gene Ontology (GO): 2 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006351transcription, DNA-dependent IEA--
    GO:0006355regulation of transcription, DNA-dependent IEA--

    ZNF182 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for ZNF182 (ZN182)

    Search CenterWatch for drugs/clinical trials and news about ZNF182 / ZN182

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    Conferences by KenesGroup, exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Sirion Biotech, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ZNF182 gene (3 alternative transcripts): 
    NM_001007088.1  NM_001178099.1  NM_006962.1  

    Unigene Cluster for ZNF182:

    Zinc finger protein 182
    Hs.189690  [show with all ESTs]
    Unigene Representative Sequence: NM_001178099
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000376943 ENST00000396965(uc004dir.3 uc004dis.3 uc004dit.3)
    ENST00000305127
    miRNA
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    8/13 QIAGEN miScript miRNA Assays for microRNAs that regulate ZNF182 (see all 13):
    hsa-miR-3690 hsa-miR-522 hsa-let-7a-2* hsa-miR-1253 hsa-miR-378b hsa-miR-224* hsa-miR-422a hsa-miR-513b
    SwitchGear 3'UTR luciferase reporter plasmidZNF182 3' UTR sequence
    Inhib. RNA
    Products:
         
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      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat ZNF182

    Additional mRNA sequence: 

    AK097687.1 AK122874.1 AK130362.1 AK299325.1 BC106875.2 BC114216.1 BX537686.1 BX648401.1 
    X52345.1 

    4 DOTS entries:

    DT.104702  DT.207706  DT.121315948  DT.70104709 

    24/49 AceView cDNA sequences (see all 49):

    AK130362 AA129708 BX419699 AW305012 BU681237 AI632919 BX115806 BU618679 
    AW137383 CA435762 BM722079 AI733750 X52345 BM842426 AW291763 BF589361 
    BM845671 BQ006588 BQ447226 BX648401 AA223719 AK097687 AW440129 BM678661 

    GeneLoc Exon Structure

    3 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF182    About this scheme

    ExUns: 1 ^ 2a · 2b ^ 3
    SP1:              -         
    SP2:              -         
    SP3:                        


    ECgene alternative splicing isoforms for ZNF182

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ZNF182 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: AGAACCTGGT
    ZNF182 Expression
    About this image


    See ZNF182 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ZNF182

    SOURCE GeneReport for Unigene cluster: Hs.189690
        SABiosciences Custom PCR Arrays for ZNF182
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF182

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of human and mouse.

    Orthologs for ZNF182 gene from 1/4 species (see all 4)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Zfp1821 , 5 zinc finger protein 1821, 5 85.43(n)1
    87.42(a)1
      X (16.55 cM)5
    3195351  NM_001013387.21  NP_001013405.21 
     210289395 


    ENSEMBL Gene Tree for ZNF182 (if available)
    TreeFam Gene Tree for ZNF182 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ZNF182 gene
    ZNF3342  ZNF1752  ZNF6742  ZNF4872  ZNF5102  LOC1002875152  ZNF6142  RBAK2  
    ZNF262  ZNF6132  ZNF812  ZNF6492  KRBOX42  ZNF33B2  ENSG000002673602  ZNF7822  
    ZNF122  ENSG000002296312  ZNF5672  ZNF37A2  ZNF3002  ZNF2482  ZNF3822  
    18/506 SIMAP similar genes for ZNF182 using alignment to 1 protein entry:     ZN182_HUMAN(see all similar genes):
    ZNF78L1    ZNF852    ZNF436    DKFZp666M039    POM121C    ZSCAN16
    ZSCAN2    kr-znf3    DKFZp666C237    ZNF664    DKFZp313M0722    HZF36
    ZNF22    ZNF24    ZNF323    ZNF572    ZSCAN31    DKFZp686D2168

    ZNF182 for paralogs           About GeneDecksing


    1 Pseudogenes.org Pseudogene for ZNF182
    PGOHUM00000243103


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/371 SNPs in ZNF182 are shown (see all 371)    About this table     
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr X posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1411442971,2
    C--47753379(+) GATTCC/GTGTTT 3 -- ds50010--------
    rs455836351,2
    C--47753515(+) TCAATA/TATTTT 3 -- ds50010--------
    rs1865937841,2
    --47753651(+) ATTCAA/CCAAAA 3 -- ds50010--------
    rs5196091,2
    C--47753793(+) GTACAT/CAGTAC 3 -- ut31 ese31Minor allele frequency- C:0.00NA 2
    rs734912761,2
    C--47753886(+) CCCAAG/AGTAAT 3 -- ut311Minor allele frequency- A:0.50WA 2
    rs1424794711,2
    --47754191(+) ACAAAC/TGCTGC 3 -- ut310--------
    rs1461115121,2
    C--47754250(+) GTACAG/TTCCTA 3 -- ut310--------
    rs115505531,2
    C--47754450(+) CCCACA/GGCTGT 3 -- ut312Minor allele frequency- G:0.00NA 4
    rs1910645461,2
    --47754461(+) TCGTTC/GTTTCT 3 -- ut310--------
    rs1832096111,2
    --47754616(+) TTCTCA/GAGGCC 3 -- ut310--------

    HapMap Linkage Disequilibrium report for ZNF182 (47834250 - 47863394 bp)

    Structural Variations
         Database of Genomic Variants (DGV) 10/11 variations for ZNF182 (see all 11):    About this table     
    Variant IDTypeSubtypePubMed ID
    nsv6890CNV Loss18451855
    nsv522886CNV Gain19592680
    nsv471601CNV Gain15918152
    esv2752324CNV Gain17911159
    esv25781CNV Gain19812545
    esv32909CNV Gain+Loss17666407
    dgv2443e1CNV Complex17122850
    dgv2444e1CNV Complex17122850
    dgv14n29CNV Complex16826518
    dgv2442e1CNV Complex17122850


    Locus Specific Mutation Databases (LSDB): ZNF182
    SABiosciences Cancer Mutation PCR Assays
    SeqTarget long-range PCR primers for resequencing ZNF182
    DNA2.0 Custom Variant and Variant Library Synthesis for ZNF182

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Conferences by KenesGroup, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section
    OMIM gene information: 314993    OMIM disorders: --

    5 diseases for ZNF182:    About MalaCards
    aland island eye disease    eye disease    synovial sarcoma    wiskott-aldrich syndrome
    sarcoma


    ZNF182 for disorders           About GeneDecksing

    Genetic Association Database (GAD): ZNF182
    Human Genome Epidemiology (HuGE) Navigator: ZNF182 (1 document)

    Export disorders for ZNF182 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ZNF182 gene integrated from 9 sources:
    (articles sorted by number of sources associating them with ZNF182)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    3. Localization of a novel zinc finger gene to the human chromosome 7p11.2-p12 by fluorescence in situ hybridization. (PubMed id 8914609)1, 3 Wang R....Liew C.C. (1996)
    4. Clustered organization of Kruppel zinc-finger genes at Xp11.23, flanking a translocation breakpoint at OATL1: a physical map with locus assignments for ZNF21, ZNF41, ZNF81, and ELK1. (PubMed id 8088786)1, 3 Knight J.C....Coleman M.P. (1994)
    5. Twenty-seven nonoverlapping zinc finger cDNAs from hu man T cells map to nine different chromosomes with apparent clustering. (PubMed id 2014798)1, 3 Huebner K....Thiesen H.J. (1991)
    6. Multiple genes encoding zinc finger domains are expressed in human T cells. (PubMed id 2288909)1, 2 Thiesen H.-J. (1990)
    7. Genetic associations of variants in genes encoding HI V-dependency factors required for HIV-1 infection. (PubMed id 21083371)4 Chinn L.W....O'Brien S.J. (2010)
    8. The DNA sequence of the human X chromosome. (PubMed id 15772651)2 Ross M.T.... Bentley D.R. (2005)
    9. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PubMed id 15146197)1 Brandenberger R.... Stanton L.W. (2004)
    10. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
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    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 7569 HGNC: 13001 AceView: ZNF21 Ensembl:ENSG00000147118 euGenes: HUgn7569
    ECgene: ZNF182 H-InvDB: ZNF182

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ZNF182 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ZNF182 gene:
    Search GeneIP for patents involving ZNF182

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    GeneCards Homepage - Last full update: 23 Oct 2013 - Incrementals: 3 Nov 2013 , 7 Nov 2013 , 23 Jan 2014

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