ZNF157 Gene
protein-coding GIFtS : 51
GCID: GC0X P047230
zinc finger protein 157 (Previous name: zinc finger protein 157 (HZF22) )
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Aliasesfor ZNF157 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Zinc Finger Protein 157 1 2 HZF221 2 Zinc Finger Protein HZF222 3 Zinc Finger Protein 157 (HZF22)1 Zinc Finger Protein 222
Export aliases for ZNF157 gene to outside databases Previous GC identifers: GC0XP046032 GC0XP045490 GC0XP046275 GC0XP046986 GC0XP047114 GC0XP044943
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Summariesfor ZNF157 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for ZNF157 : This gene product is a likely zinc finger family transcription factor. It contains KRAB-A and KRAB-B domains that act as transcriptional repressors in related proteins, and multiple zinc finger DNA binding motifs and finger linking regions characteristic of the Kruppel family. This gene is part of a gene cluster on chromosome Xp11.23. (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: ZN157_HUMAN, P51786 Function : May be involved in transcriptional regulation
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Genomic Viewsfor ZNF157 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000023.10 NC_018934.1 NT_079573.4 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the ZNF157 gene promoter: E2F-3a E2F-4 Elk-1 E2F-5 FOXF2 LUN-1 E2F-2 YY1 E2F-1 E2F Other transcription factors Search SABiosciences Chromatin IP Primers for ZNF157 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF157
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: Xp11.2 Ensembl cytogenetic band: Xp11.23 HGNC cytogenetic band: Xp11.2 ZNF157 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XP047230: view genomic region
(about GC identifiers )
Start:
47,229,982 bp from pter
End:
47,273,704 bp from pter
Size:
43,723 bases
Orientation:
plus strand
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Proteinsfor ZNF157 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: ZN157_HUMAN, P51786 (See
protein sequence )Recommended Name: Zinc finger protein 157 Size : 506 amino acids; 58291 Da
Subcellular location : Nucleus (Potential)
Secondary accessions : Q96LE9Explore the universe of human proteins at neXtProt for ZNF157: NX_P51786 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_P51786 ZNF157 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins: NP_003437.2 ENSEMBL proteins: ENSP00000366273 Reactome Protein details: P51786 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005634 nucleus
IEA --
ZNF157 for ontologies About GeneDecksing ZNF157 Antibody Products: Assay Products for ZNF157:
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Protein
Domains / Familiesfor ZNF157 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
ZNF157 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry P51786 ProtoNet protein and cluster: P51786
2 Blocks protein families : IPB001909 KRAB box IPB007086 C2H2-type zinc finger signature UniProtKB/Swiss-Prot: ZN157_HUMAN, P51786 Similarity : Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity : Contains 12 C2H2-type zinc fingersSimilarity : Contains 1 KRAB domain
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Functionfor ZNF157 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: ZN157_HUMAN, P51786 Function : May be involved in transcriptional regulation
Genatlas biochemistry entry for ZNF157 : zinc finger 157 (C2H2 type,Kruppel-like) Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: ZNF157 (NM_003446 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ZNF157 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ZNF157
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF157
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
ZNF157 for ontologies About GeneDecksing 1 GenomeRNAi human phenotype for ZNF157 :
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Pathways & Interactionsfor ZNF157 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways   About this table See pathways by source Super-pathway contained gene-specific pathways 1 Generic Transcription Pathway
Pathway sources See GeneCards unified pathways Show all pathways 2
Reactome Pathways for ZNF157
ZNF157 for pathways About GeneDecksing Interactions: Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ZNF157 Gene Ontology (GO): 2 biological process terms (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0000122 negative regulation of transcription from RNA polymerase II promoter
TAS 8586441 GO:0006351 transcription, DNA-dependent
IEA --
ZNF157 for ontologies About GeneDecksing
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Drugs & Compoundsfor ZNF157 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for ZNF157 Search CenterWatch for drugs/clinical trials and news about ZNF157 / ZN157
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Transcriptsfor ZNF157 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for ZNF157 gene: NM_003446.3 Unigene Cluster for ZNF157:
Zinc finger protein 157 Hs.89897 [show with all ESTs ] Unigene Representative Sequence: U28687 1 Ensembl transcript including schematic representation, and UCSC links where relevant : ENST00000377073 (uc004dhr.1 ) Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157 (see all 2 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector: ZNF157 (NM_003446 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for ZNF157 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ZNF157
Additional cDNA sequence: BC075003.2 U28687.1
1 DOTS entry : DT.454973
13 AceView cDNA sequences :
BC075003 CO245598 BG911227 U28687 CO245594 CO245585 NM_003446 CO250117 T10258 CO245744 CO247685 CO250200 T10259 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for ZNF157 About this scheme ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b SP1 :               SP2 :         -       SP3 :     -     -      
ECgene alternative splicing isoforms for ZNF157
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Expression for ZNF157 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section ZNF157 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image ZNF157 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category Definitive endoderm-like cells (A scalable, suspensi... )Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See ZNF157 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for ZNF157 SOURCE GeneReport for Unigene cluster: Hs.89897 SABiosciences Custom PCR Arrays for ZNF157 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ZNF157Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat ZNF157 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ZNF157 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ZNF157 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF157
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Orthologsfor ZNF157 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of chordates.
Orthologs for ZNF157 gene from 1/9 species (see all 9 ) About this table
ENSEMBL Gene Tree for ZNF157 (if available)TreeFam Gene Tree for ZNF157 (if available)
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Paralogsfor ZNF157 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for ZNF157 gene ZNF684 2 ZNF25 2 18/466 SIMAP similar genes for ZNF157 using alignment to 1 protein entry: ZN157_HUMAN (see all similar genes ):HZF36 ZNF530 ZFP2 ZNF391 ZSCAN16 HZF30 ZNF347 ZNF501 ZNF544 ZNF665 ZNF696 zf30 ZNF135 DKFZp434G1930 DKFZp666M039 DKFZp686B16128 ZNF146 ZNF160
ZNF157 for paralogs About GeneDecksing
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Genomic Variantsfor ZNF157 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr X pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for ZNF157 (47229982 - 47273704 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for ZNF157: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ZNF157
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Disorders
/ Diseasesfor ZNF157 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
ZNF157 for disorders About MalaCards
ZNF157 for disorders About GeneDecksing
OMIM gene information: 300024
OMIM disorders : --Export disorders for ZNF157 gene to outside databases
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Publicationsfor ZNF157 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for ZNF157 gene integrated from 9 sources : (articles sorted by number of sources associating them with ZNF157) Utopia : connect your pdf to the dynamic world of online information
Cloning and characterization of a novel zinc finger gene in Xp11.2. (PubMed id 8586441) 1 , 2 , 3, 9 Derry J.M.J.... Francke U. (1995) The DNA sequence of the human X chromosome. (PubMed id 15772651) 1 , 2 Ross M.T.... Bentley D.R. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Genome-wide association identifies ATOH7 as a major g ene determining human optic disc size. (PubMed id 20395239) 1 Macgregor S....Mackey D.A. (2010) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008) An integrated, functionally annotated gene map of the DXS8026-ELK1 interval on human Xp11.3-Xp11.23: potential hotspot for neurogenetic disorders. (PubMed id 11944989) 1 Thiselton D.L.... Meindl A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002)
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External Searches for ZNF157 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing ZNF157 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
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Other Databases showing ZNF157 gene
(According to HUGE )
About This Section --
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Specialized Databases showing ZNF157 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Name Description
PharmGKB entry for ZNF157 Pharmacogenomics, SNPs, Pathways
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About This Section Patent Information for ZNF157 gene: Search GeneIP for patents involving ZNF157 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor ZNF157 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for ZNF157 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for ZNF157 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for ZNF157 Browse OriGene Protein Over-expression Lysates Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for ZNF157 Browse 3'-UTR reporter clones for miRNA target validation OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for ZNF157 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for ZNF157 OriGene Custom Protein Services for ZNF157 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat ZNF157 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing ZNF157 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ZNF157 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat ZNF157 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat ZNF157 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat ZNF157
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ZNF157 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for ZNF157
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Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat ZNF157
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