Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZNF138 Gene

Aliases for ZNF138 Gene

  • Zinc Finger Protein 138 2 3 5
  • Zinc Finger Protein 138 (Clone PHZ-32) 2 3
  • PHZ-32 3

External Ids for ZNF138 Gene

Previous GeneCards Identifiers for ZNF138 Gene

  • GC07P062894
  • GC07P063652
  • GC07P063684
  • GC07P063085
  • GC07P063698
  • GC07P063892
  • GC07P064254
  • GC07P060636

Summaries for ZNF138 Gene

GeneCards Summary for ZNF138 Gene

ZNF138 (Zinc Finger Protein 138) is a Protein Coding gene. Among its related pathways are Gene Expression. GO annotations related to this gene include nucleic acid binding and transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZNF718.

UniProtKB/Swiss-Prot for ZNF138 Gene

  • May be involved in transcriptional regulation as a repressor.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZNF138 Gene

Genomics for ZNF138 Gene

Regulatory Elements for ZNF138 Gene

Promoters for ZNF138 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZNF138 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZNF138 Gene

Chromosome:
7
Start:
64,794,388 bp from pter
End:
64,853,800 bp from pter
Size:
59,413 bases
Orientation:
Plus strand

Genomic View for ZNF138 Gene

Genes around ZNF138 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZNF138 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZNF138 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZNF138 Gene

Proteins for ZNF138 Gene

  • Protein details for ZNF138 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P52744-ZN138_HUMAN
    Recommended name:
    Zinc finger protein 138
    Protein Accession:
    P52744
    Secondary Accessions:
    • B4DFX2
    • B4DP87
    • E9PHI7
    • E9PHK7

    Protein attributes for ZNF138 Gene

    Size:
    262 amino acids
    Molecular mass:
    30592 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZNF138 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZNF138 Gene

Proteomics data for ZNF138 Gene at MOPED

Post-translational modifications for ZNF138 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for ZNF138 Gene

Domains & Families for ZNF138 Gene

Gene Families for ZNF138 Gene

Protein Domains for ZNF138 Gene

Suggested Antigen Peptide Sequences for ZNF138 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

P52744

UniProtKB/Swiss-Prot:

ZN138_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
  • Contains 6 C2H2-type zinc fingers.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 6 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZNF138: view

Function for ZNF138 Gene

Molecular function for ZNF138 Gene

GENATLAS Biochemistry:
zinc finger protein 138 (C2H2 type,Kruppel-like)
UniProtKB/Swiss-Prot Function:
May be involved in transcriptional regulation as a repressor.

Gene Ontology (GO) - Molecular Function for ZNF138 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with ZNF138: view
genes like me logo Genes that share phenotypes with ZNF138: view

Animal Model Products

CRISPR Products

miRNA for ZNF138 Gene

miRTarBase miRNAs that target ZNF138

Inhibitory RNA Products

In Situ Assay Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for ZNF138 Gene

Localization for ZNF138 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZNF138 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZNF138 Gene COMPARTMENTS Subcellular localization image for ZNF138 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZNF138 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular IEA --
genes like me logo Genes that share ontologies with ZNF138: view

Pathways & Interactions for ZNF138 Gene

SuperPathways for ZNF138 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZNF138: view

Pathways by source for ZNF138 Gene

2 Reactome pathways for ZNF138 Gene

Gene Ontology (GO) - Biological Process for ZNF138 Gene

None

No data available for SIGNOR curated interactions for ZNF138 Gene

Drugs & Compounds for ZNF138 Gene

No Compound Related Data Available

Transcripts for ZNF138 Gene

Unigene Clusters for ZNF138 Gene

Zinc finger protein 138:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZNF138 Gene

ExUns: 1 ^ 2 ^ 3
SP1:
SP2:

Relevant External Links for ZNF138 Gene

GeneLoc Exon Structure for
ZNF138
ECgene alternative splicing isoforms for
ZNF138

Expression for ZNF138 Gene

mRNA expression in normal human tissues for ZNF138 Gene

Protein differential expression in normal tissues from HIPED for ZNF138 Gene

This gene is overexpressed in Breast (56.3) and Prostate (12.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZNF138 Gene



SOURCE GeneReport for Unigene cluster for ZNF138 Gene Hs.184080

genes like me logo Genes that share expression patterns with ZNF138: view

Protein tissue co-expression partners for ZNF138 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZNF138 Gene

Orthologs for ZNF138 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZNF138 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia -- 36
  • 27 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 36
  • 20 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 18 (a)
ManyToMany
-- 36
  • 24 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Zfp493 36
  • 28 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 54 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 20 (a)
ManyToMany
-- 36
  • 15 (a)
ManyToMany
-- 36
  • 18 (a)
ManyToMany
-- 36
  • 19 (a)
ManyToMany
-- 36
  • 14 (a)
ManyToMany
-- 36
  • 13 (a)
ManyToMany
-- 36
  • 14 (a)
ManyToMany
-- 36
  • 13 (a)
ManyToMany
Species with no ortholog for ZNF138:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZNF138 Gene

ENSEMBL:
Gene Tree for ZNF138 (if available)
TreeFam:
Gene Tree for ZNF138 (if available)

Paralogs for ZNF138 Gene

(485) SIMAP similar genes for ZNF138 Gene using alignment to 5 proteins:

genes like me logo Genes that share paralogs with ZNF138: view

Variants for ZNF138 Gene

Sequence variations from dbSNP and Humsavar for ZNF138 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10949946 - 64,831,598(+) TAAGG(A/G)ACACC intron-variant, nc-transcript-variant, downstream-variant-500B, reference, missense, utr-variant-3-prime, utr-variant-5-prime
rs1060405 -- 64,838,476(-) AGAGG(C/T)AGAGG intron-variant
rs1060406 -- 64,838,475(-) GAGGT(A/G)GAGGT intron-variant
rs1568913 -- 64,832,588(+) CAAAT(A/G)TGAAG intron-variant, nc-transcript-variant, utr-variant-3-prime
rs1358004 -- 64,844,602(+) TTTTT(A/T)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZNF138 Gene

Variant ID Type Subtype PubMed ID
dgv1147e201 CNV Deletion 23290073
esv2422405 CNV Duplication 17116639
nsv464518 CNV Gain 19166990
dgv7307n71 CNV Gain 21882294
dgv7308n71 CNV Gain 21882294
nsv888279 CNV Loss 21882294
nsv888281 CNV Loss 21882294
esv33896 CNV Gain 17666407
esv2734581 CNV Deletion 23290073
esv2677316 CNV Deletion 23128226
esv2675483 CNV Deletion 23128226
nsv508457 CNV Loss 20534489
esv2478591 CNV Insertion 19546169

Variation tolerance for ZNF138 Gene

Residual Variation Intolerance Score: 89.9% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.36; 41.87% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZNF138 Gene

HapMap Linkage Disequilibrium report
ZNF138

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZNF138 Gene

Disorders for ZNF138 Gene

Relevant External Links for ZNF138

Genetic Association Database (GAD)
ZNF138
Human Genome Epidemiology (HuGE) Navigator
ZNF138
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZNF138

No disorders were found for ZNF138 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZNF138 Gene

Publications for ZNF138 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48 67
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  3. Genome-wide and candidate gene association study of cigarette smoking behaviors. (PMID: 19247474) Caporaso N. … Bergen A.W. (PLoS ONE 2009) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for ZNF138 Gene

Sources for ZNF138 Gene

Back to Top

Content