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Aliases for ZMIZ1-AS1 Gene

Subcategory (RNA class) for ZMIZ1-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ZMIZ1-AS1 Gene

  • ZMIZ1 Antisense RNA 1 2 3

External Ids for ZMIZ1-AS1 Gene

ORGUL Members for ZMIZ1-AS1 Gene

Summaries for ZMIZ1-AS1 Gene

GeneCards Summary for ZMIZ1-AS1 Gene

ZMIZ1-AS1 (ZMIZ1 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZMIZ1-AS1 Gene

Genomics for ZMIZ1-AS1 Gene

Genomic Location for ZMIZ1-AS1 Gene

Start:
78,943,326 bp from pter
End:
79,067,895 bp from pter
Size:
124,570 bases
Orientation:
Minus strand

Genomic View for ZMIZ1-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZMIZ1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZMIZ1-AS1 Gene

No data available for Regulatory Elements for ZMIZ1-AS1 Gene

Proteins for ZMIZ1-AS1 Gene

Post-translational modifications for ZMIZ1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZMIZ1-AS1 Gene

Domains for ZMIZ1-AS1 Gene

Gene Families for ZMIZ1-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with ZMIZ1-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for ZMIZ1-AS1 Gene

Function for ZMIZ1-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZMIZ1-AS1 Gene

Localization for ZMIZ1-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for ZMIZ1-AS1 Gene

Pathways for ZMIZ1-AS1 Gene

SuperPathways for ZMIZ1-AS1 Gene

No Data Available

Interacting Proteins for ZMIZ1-AS1 Gene

Gene Ontology (GO) - Biological Process for ZMIZ1-AS1 Gene

None

No data available for Pathways by source for ZMIZ1-AS1 Gene

Transcripts for ZMIZ1-AS1 Gene

Unigene Clusters for ZMIZ1-AS1 Gene

ZMIZ1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZMIZ1-AS1 Gene

No ASD Table

Relevant External Links for ZMIZ1-AS1 Gene

GeneLoc Exon Structure for
ZMIZ1-AS1
ECgene alternative splicing isoforms for
ZMIZ1-AS1

Expression for ZMIZ1-AS1 Gene

mRNA expression in normal human tissues for ZMIZ1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZMIZ1-AS1 Gene

This gene is overexpressed in Adrenal Gland (5.1) and Testis (4.8).

SOURCE GeneReport for Unigene cluster for ZMIZ1-AS1 Gene Hs.309176

genes like me logo Genes that share expressions with ZMIZ1-AS1: view

Orthologs for ZMIZ1-AS1 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for ZMIZ1-AS1 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia D930049A15Rik 16
Species with no ortholog for ZMIZ1-AS1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZMIZ1-AS1 Gene

ENSEMBL:
Gene Tree for ZMIZ1-AS1 (if available)
TreeFam:
Gene Tree for ZMIZ1-AS1 (if available)

Paralogs for ZMIZ1-AS1 Gene

No data available for Paralogs for ZMIZ1-AS1 Gene

Variants for ZMIZ1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZMIZ1-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs697243 -- 79,065,429(+) CTGAG(A/G)CTTTG intron-variant
rs697244 -- 79,065,292(+) CCATG(C/T)CCTCC intron-variant
rs697245 -- 79,046,687(+) GAAAT(A/G)GTTAT intron-variant
rs697246 -- 79,046,038(+) GGACA(C/T)GCAGC intron-variant
rs697247 -- 79,045,929(+) CAGAA(C/G)GGCCC intron-variant

Relevant External Links for ZMIZ1-AS1 Gene

HapMap Linkage Disequilibrium report
ZMIZ1-AS1

No data available for Structural Variations from Database of Genomic Variants (DGV) for ZMIZ1-AS1 Gene

Disorders for ZMIZ1-AS1 Gene

No disorders were found for ZMIZ1-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for ZMIZ1-AS1 Gene

Publications for ZMIZ1-AS1 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Large-scale genetic study in East Asians identifies six new loci associated with colorectal cancer risk. (PMID: 24836286) Zhang B. … Zheng W. (Nat. Genet. 2014) 3

Products for ZMIZ1-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZMIZ1-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ZMIZ1-AS1
    • Block miRNA regulation of ZMIZ1-AS1 using miScript Target Protectors

    Sources for ZMIZ1-AS1 Gene

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