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Aliases for ZIC4-AS1 Gene

Subcategory (RNA class) for ZIC4-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZIC4-AS1 Gene

  • ZIC4 Antisense RNA 1 2 3 5
  • ZIC4 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZIC4-AS1 Gene

Previous GeneCards Identifiers for ZIC4-AS1 Gene

  • GC00U933490
  • GC03P147105

Summaries for ZIC4-AS1 Gene

GeneCards Summary for ZIC4-AS1 Gene

ZIC4-AS1 (ZIC4 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZIC4-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZIC4-AS1 Gene

Genomics for ZIC4-AS1 Gene

GeneHancer (GH) Regulatory Elements for ZIC4-AS1 Gene

Promoters and enhancers for ZIC4-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I147419 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 11.6 +32.3 32348 0.2 ZNF639 MEIS2 MXI1 USF1 L3MBTL2 ZBTB2 SUZ12 BHLHE40 NRF1 MAX ZIC1 ZIC4 ZIC4-AS1 ENSG00000243620 LOC440982
GH03I147424 Enhancer 0.7 FANTOM5 dbSUPER 12 +37.6 37554 0.2 CTBP2 EZH2 ZIC1 ZIC4-AS1 ZIC4 ENSG00000243620 LOC440982 NPM1P28
GH03I147420 Enhancer 0.5 FANTOM5 dbSUPER 11.6 +33.3 33253 0.2 EZH2 LOC440982 ZIC1 ZIC4 ZIC4-AS1 ENSG00000243620
GH03I147379 Enhancer 0.5 UCNEbase 0.4 -7.8 -7816 0.2 EZH2 ZIC4 GC03P147374 ZIC4-AS1
GH03I147377 Enhancer 0.5 ENCODE 0.4 -9.0 -8967 0.9 SP1 USF1 BACH1 EZH2 GC03P147374 ZIC4-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ZIC4-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ZIC4-AS1 Gene

Genomic Locations for ZIC4-AS1 Gene
chr3:147,386,967-147,387,453
(GRCh38/hg38)
Size:
487 bases
Orientation:
Plus strand
chr3:147,104,754-147,105,240
(GRCh37/hg19)

Genomic View for ZIC4-AS1 Gene

Genes around ZIC4-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZIC4-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZIC4-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZIC4-AS1 Gene

Proteins for ZIC4-AS1 Gene

Post-translational modifications for ZIC4-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZIC4-AS1 Gene

Domains & Families for ZIC4-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZIC4-AS1 Gene

Function for ZIC4-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZIC4-AS1 Gene

Localization for ZIC4-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZIC4-AS1 Gene

Pathways & Interactions for ZIC4-AS1 Gene

SuperPathways for ZIC4-AS1 Gene

No Data Available

Interacting Proteins for ZIC4-AS1 Gene

Gene Ontology (GO) - Biological Process for ZIC4-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZIC4-AS1 Gene

Drugs & Compounds for ZIC4-AS1 Gene

No Compound Related Data Available

Transcripts for ZIC4-AS1 Gene

mRNA/cDNA for ZIC4-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZIC4-AS1 Gene

No ASD Table

Relevant External Links for ZIC4-AS1 Gene

GeneLoc Exon Structure for
ZIC4-AS1
ECgene alternative splicing isoforms for
ZIC4-AS1

Expression for ZIC4-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZIC4-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZIC4-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x24.5) and Brain - Cerebellum (x21.6).
genes like me logo Genes that share expression patterns with ZIC4-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZIC4-AS1 Gene

Orthologs for ZIC4-AS1 Gene

Evolution for ZIC4-AS1 Gene

ENSEMBL:
Gene Tree for ZIC4-AS1 (if available)
TreeFam:
Gene Tree for ZIC4-AS1 (if available)

No data available for Orthologs for ZIC4-AS1 Gene

Paralogs for ZIC4-AS1 Gene

No data available for Paralogs for ZIC4-AS1 Gene

Variants for ZIC4-AS1 Gene

Additional Variant Information for ZIC4-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZIC4-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZIC4-AS1 Gene

Disorders for ZIC4-AS1 Gene

No disorders were found for ZIC4-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZIC4-AS1 Gene

Publications for ZIC4-AS1 Gene

No publications were found for ZIC4-AS1 Gene.

Products for ZIC4-AS1 Gene

Sources for ZIC4-AS1 Gene

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