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Aliases for ZGLP1 Gene

Aliases for ZGLP1 Gene

  • Zinc Finger, GATA-Like Protein 1 2 3 5
  • GATA Zinc Finger Domain Containing 3 2 3
  • GATA-Like Protein 1 3 4
  • GLP-1 3 4
  • GLP1 3 4
  • GATA-Type Zinc Finger Protein 1 3
  • GATA Like Protein 1 2
  • GATAD3 3

External Ids for ZGLP1 Gene

Previous GeneCards Identifiers for ZGLP1 Gene

  • GC19M010279
  • GC19M010415
  • GC19M009995

Summaries for ZGLP1 Gene

GeneCards Summary for ZGLP1 Gene

ZGLP1 (Zinc Finger, GATA-Like Protein 1) is a Protein Coding gene. GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding and sequence-specific DNA binding.

UniProtKB/Swiss-Prot for ZGLP1 Gene

  • Transcriptional repressor that plays a central role in somatic cells of the gonad and is required for germ cell development. Able to repress GATA transcription factor function (By similarity).

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZGLP1 Gene

Genomics for ZGLP1 Gene

Regulatory Elements for ZGLP1 Gene

Enhancers for ZGLP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19G011086 1.8 FANTOM5 ENCODE dbSUPER 10 -782.5 -782491 11.0 CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ZNF844 RAVER1 PRKCSH ZNF700 ZNF491 C19orf38 ZNF627 ZNF653 ZNF441 ZGLP1
GH19G010338 1.2 Ensembl ENCODE 13.7 -29.5 -29464 2.3 HDAC1 HDGF TBP TBL1XR1 WRNIP1 SIN3A NFXL1 ZNF48 YY1 ZNF121 ICAM3 ENSG00000167807 ZGLP1 TYK2 ICAM5 ICAM4 ICAM1 MRPL4 PIR48013
GH19G010695 1.3 Ensembl ENCODE 10.1 -385.8 -385830 1.4 MLX AGO1 ARID4B SIN3A ZNF2 YY1 SLC30A9 ZNF143 ZNF207 KLF13 ILF3-AS1 UBE2L4 ENSG00000267612 ZNF653 RPL18AP13 ZGLP1 QTRT1 ILF3
GH19G010388 0.9 ENCODE 13 -79.2 -79180 0.2 PKNOX1 SIN3A ARID4B RAD21 ZNF143 ZNF207 RELB IKZF2 DEK PAF1 ZGLP1 ICAM5 ICAM1 MRPL4 ICAM4 EIF3G GC19P010382 MIR1181
GH19G010390 0.8 ENCODE 13 -81.0 -80990 0.2 RAD21 EGR1 ZNF143 RELB IKZF2 DEK EGR2 ZNF654 ZNF362 REST ZGLP1 ICAM5 ICAM1 MRPL4 ICAM4 EIF3G GC19P010382 MIR1181
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZGLP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZGLP1 Gene

Chromosome:
19
Start:
10,304,803 bp from pter
End:
10,309,880 bp from pter
Size:
5,078 bases
Orientation:
Minus strand

Genomic View for ZGLP1 Gene

Genes around ZGLP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZGLP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZGLP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZGLP1 Gene

Proteins for ZGLP1 Gene

  • Protein details for ZGLP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P0C6A0-ZGLP1_HUMAN
    Recommended name:
    GATA-type zinc finger protein 1
    Protein Accession:
    P0C6A0

    Protein attributes for ZGLP1 Gene

    Size:
    271 amino acids
    Molecular mass:
    29628 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZGLP1 Gene

Post-translational modifications for ZGLP1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZGLP1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZGLP1 Gene

Domains & Families for ZGLP1 Gene

Gene Families for ZGLP1 Gene

Protein Domains for ZGLP1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZGLP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZGLP1: view

No data available for UniProtKB/Swiss-Prot for ZGLP1 Gene

Function for ZGLP1 Gene

Molecular function for ZGLP1 Gene

UniProtKB/Swiss-Prot Function:
Transcriptional repressor that plays a central role in somatic cells of the gonad and is required for germ cell development. Able to repress GATA transcription factor function (By similarity).

Gene Ontology (GO) - Molecular Function for ZGLP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA --
GO:0001085 RNA polymerase II transcription factor binding IBA --
GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding IBA --
GO:0003677 DNA binding IEA --
GO:0003682 chromatin binding IBA --
genes like me logo Genes that share ontologies with ZGLP1: view
genes like me logo Genes that share phenotypes with ZGLP1: view

Animal Models for ZGLP1 Gene

MGI Knock Outs for ZGLP1:

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for ZGLP1 Gene

Localization for ZGLP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZGLP1 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZGLP1 gene
Compartment Confidence
nucleus 5
cytosol 2
extracellular 1

Gene Ontology (GO) - Cellular Components for ZGLP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA,IBA --
GO:0005667 transcription factor complex IBA --
genes like me logo Genes that share ontologies with ZGLP1: view

Pathways & Interactions for ZGLP1 Gene

SuperPathways for ZGLP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZGLP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IEA --
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006366 transcription from RNA polymerase II promoter IEA --
GO:0007275 multicellular organism development IEA --
genes like me logo Genes that share ontologies with ZGLP1: view

No data available for Pathways by source and SIGNOR curated interactions for ZGLP1 Gene

Transcripts for ZGLP1 Gene

mRNA/cDNA for ZGLP1 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZGLP1 Gene

Zinc finger, GATA-like protein 1:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZGLP1 Gene

No ASD Table

Relevant External Links for ZGLP1 Gene

GeneLoc Exon Structure for
ZGLP1
ECgene alternative splicing isoforms for
ZGLP1

Expression for ZGLP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZGLP1 Gene

Protein differential expression in normal tissues from HIPED for ZGLP1 Gene

This gene is overexpressed in Peripheral blood mononuclear cells (29.8), Testis (24.3), and Fetal ovary (12.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZGLP1 Gene



Protein tissue co-expression partners for ZGLP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZGLP1 Gene:

ZGLP1

SOURCE GeneReport for Unigene cluster for ZGLP1 Gene:

Hs.709296

Evidence on tissue expression from TISSUES for ZGLP1 Gene

  • Nervous system(4)
genes like me logo Genes that share expression patterns with ZGLP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZGLP1 Gene

Orthologs for ZGLP1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZGLP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZGLP1 34 35
  • 99.38 (n)
dog
(Canis familiaris)
Mammalia ZGLP1 34 35
  • 80.37 (n)
cow
(Bos Taurus)
Mammalia ZGLP1 34 35
  • 78.53 (n)
mouse
(Mus musculus)
Mammalia Zglp1 34 16 35
  • 73.56 (n)
rat
(Rattus norvegicus)
Mammalia Zglp1 34
  • 72.6 (n)
zebrafish
(Danio rerio)
Actinopterygii zglp1 35
  • 24 (a)
OneToOne
Species where no ortholog for ZGLP1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZGLP1 Gene

ENSEMBL:
Gene Tree for ZGLP1 (if available)
TreeFam:
Gene Tree for ZGLP1 (if available)

Paralogs for ZGLP1 Gene

No data available for Paralogs for ZGLP1 Gene

Variants for ZGLP1 Gene

Sequence variations from dbSNP and Humsavar for ZGLP1 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1001288621 -- 10,306,407(+) CGTGC(A/C)CGACC intron-variant
rs1001347366 -- 10,307,027(+) TACTC(C/G)AGAGG intron-variant
rs1001522435 -- 10,304,315(+) CATCA(C/T)GTTGG downstream-variant-500B
rs1001559486 -- 10,309,315(+) GCTAG(C/T)GGGGT utr-variant-5-prime
rs1001995263 -- 10,305,789(+) GGCAG(A/G)GAAGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZGLP1 Gene

Variant ID Type Subtype PubMed ID
nsv470124 CNV gain 18288195

Variation tolerance for ZGLP1 Gene

Residual Variation Intolerance Score: 52.3% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.90; 35.45% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZGLP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZGLP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZGLP1 Gene

Disorders for ZGLP1 Gene

Relevant External Links for ZGLP1

Human Genome Epidemiology (HuGE) Navigator
ZGLP1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZGLP1

No disorders were found for ZGLP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZGLP1 Gene

Publications for ZGLP1 Gene

  1. GLP-1: a novel zinc finger protein required in somatic cells of the gonad for germ cell development. (PMID: 16982049) Li S. … Morrisey E.E. (Dev. Biol. 2007) 2 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J. … Lucas S.M. (Nature 2004) 3 4 64
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  5. Minor Contribution of Endogenous GLP-1 and GLP-2 to Postprandial Lipemia in Obese Men. (PMID: 26752550) Matikainen N. … Taskinen M.R. (PLoS ONE 2016) 3 64

Products for ZGLP1 Gene

Sources for ZGLP1 Gene

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