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Aliases for ZFX-AS1 Gene

Subcategory (RNA class) for ZFX-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ZFX-AS1 Gene

  • ZFX Antisense RNA 1 2 3 5
  • ZFX Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZFX-AS1 Gene

Previous GeneCards Identifiers for ZFX-AS1 Gene

  • GC00U933980

Summaries for ZFX-AS1 Gene

GeneCards Summary for ZFX-AS1 Gene

ZFX-AS1 (ZFX Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZFX-AS1 Gene

Genomics for ZFX-AS1 Gene

Regulatory Elements for ZFX-AS1 Gene

Enhancers for ZFX-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF024242 1.2 Ensembl ENCODE 12.7 -94.3 -94302 3.7 TBP ARID4B RAD21 ZBTB40 RFX5 ZNF121 ZNF366 FOS SMARCC1 ZNF362 ZFX ZFX-AS1 ENSG00000201407 KLHL15 SUPT20HL2
GH0XF024187 1 ENCODE 12.7 -38.2 -38165 0.2 MLX FEZF1 FOS SP5 PPARG KAT8 MIER3 ZNF610 SMARCA4 GLIS1 ZFX ZFX-AS1 ENSG00000201407 SUPT20HL2
GH0XF024186 0.7 ENCODE 12.7 -37.0 -36990 1.2 GATAD2A SP5 ZNF384 ZNF316 ZGPAT HNF1A RERE TCF7 CREB1 NR2F6 ZFX ZFX-AS1 ENSG00000201407 SUPT20HL2
GH0XF024125 0.4 ENCODE 12.7 +24.5 24456 0.2 FEZF1 TRIM28 ZFX ZFX-AS1 GC0XP024133 GC0XP024078
GH0XF024144 1.1 ENCODE 0.8 +0.5 508 9.7 PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF302 ZNF143 RPL9P7 POLA1 ZFX ZFX-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZFX-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZFX-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000476591 -746 3601 PKNOX1 WRNIP1 ARID4B SIN3A ZNF48 ZNF2 YY1 ZNF121 GLIS2 ZNF143

Genomic Location for ZFX-AS1 Gene

Chromosome:
X
Start:
24,146,225 bp from pter
End:
24,149,654 bp from pter
Size:
3,430 bases
Orientation:
Minus strand

Genomic View for ZFX-AS1 Gene

Genes around ZFX-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZFX-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZFX-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZFX-AS1 Gene

Proteins for ZFX-AS1 Gene

Post-translational modifications for ZFX-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZFX-AS1 Gene

Domains & Families for ZFX-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZFX-AS1 Gene

Function for ZFX-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZFX-AS1 Gene

Localization for ZFX-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZFX-AS1 Gene

Pathways & Interactions for ZFX-AS1 Gene

SuperPathways for ZFX-AS1 Gene

No Data Available

Interacting Proteins for ZFX-AS1 Gene

Gene Ontology (GO) - Biological Process for ZFX-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZFX-AS1 Gene

Transcripts for ZFX-AS1 Gene

mRNA/cDNA for ZFX-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZFX-AS1 Gene

ZFX antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZFX-AS1 Gene

No ASD Table

Relevant External Links for ZFX-AS1 Gene

GeneLoc Exon Structure for
ZFX-AS1
ECgene alternative splicing isoforms for
ZFX-AS1

Expression for ZFX-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZFX-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZFX-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.2).

SOURCE GeneReport for Unigene cluster for ZFX-AS1 Gene:

Hs.609207
genes like me logo Genes that share expression patterns with ZFX-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZFX-AS1 Gene

Orthologs for ZFX-AS1 Gene

Evolution for ZFX-AS1 Gene

ENSEMBL:
Gene Tree for ZFX-AS1 (if available)
TreeFam:
Gene Tree for ZFX-AS1 (if available)

No data available for Orthologs for ZFX-AS1 Gene

Paralogs for ZFX-AS1 Gene

No data available for Paralogs for ZFX-AS1 Gene

Variants for ZFX-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZFX-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs112096887 -- 24,150,007(+) GCGGG(C/G)GTTGG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs112309338 -- 24,149,728(+) CGGCC(C/G)AGTGC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs112380861 -- 24,149,095(+) AAAGA(-/T)TTTTT intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs112620786 -- 24,149,717(+) CAGCC(A/G)GAGCC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs113207918 -- 24,148,080(+) TTTTT(-/G)ATTGA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZFX-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv504n21 CNV gain 19592680
nsv1076250 CNV deletion 25765185
nsv1145288 CNV deletion 24896259
nsv524256 CNV gain 19592680
nsv818019 CNV gain 17921354

Relevant External Links for ZFX-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZFX-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZFX-AS1 Gene

Disorders for ZFX-AS1 Gene

Relevant External Links for ZFX-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZFX-AS1

No disorders were found for ZFX-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZFX-AS1 Gene

Publications for ZFX-AS1 Gene

No publications were found for ZFX-AS1 Gene.

Products for ZFX-AS1 Gene

Sources for ZFX-AS1 Gene

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