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Aliases for ZFX-AS1 Gene

Subcategory (RNA class) for ZFX-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZFX-AS1 Gene

  • ZFX Antisense RNA 1 2 3 5
  • ZFX Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZFX-AS1 Gene

Previous GeneCards Identifiers for ZFX-AS1 Gene

  • GC00U933980

Summaries for ZFX-AS1 Gene

GeneCards Summary for ZFX-AS1 Gene

ZFX-AS1 (ZFX Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for ZFX-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZFX-AS1 Gene

Genomics for ZFX-AS1 Gene

Regulatory Elements for ZFX-AS1 Gene

Enhancers for ZFX-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH024242 1.1 Ensembl ENCODE 12.7 -94.3 -94343 3.6 TBP ARID4B RAD21 RFX5 ZNF366 ZNF143 FOS RUNX3 IKZF2 ZNF654 ZFX ZFX-AS1 ENSG00000201407 KLHL15 SUPT20HL2
GH0XH024187 1 ENCODE 12.7 -38.2 -38165 0.2 FOXA2 MLX FEZF1 TCF12 FOS SP5 PPARG KAT8 NFIL3 MIER3 ZFX-AS1 ZFX ENSG00000201407 SUPT20HL2
GH0XH024186 0.7 ENCODE 12.7 -37.0 -36990 1.2 GATAD2A SP5 ZNF384 ZGPAT HNF1A ZNF316 RERE CREB1 TCF7 NR2F6 ZFX ZFX-AS1 ENSG00000201407 SUPT20HL2
GH0XH024125 0.4 ENCODE 12.7 +24.5 24456 0.2 FEZF1 ZFX ZFX-AS1 GC0XP024133 GC0XP024078
GH0XH024144 1.4 Ensembl ENCODE 0.7 +0.5 508 9.7 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF302 POLA1 RPL9P7 ZFX ZFX-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZFX-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZFX-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000245359 -446 3001 PKNOX1 ATF1 FOXA2 ARID4B SIN3A ZNF2 YY1 ZNF121 GLIS2 ELK1

Genomic Locations for ZFX-AS1 Gene

Genomic Locations for ZFX-AS1 Gene
3,430 bases
Minus strand

Genomic View for ZFX-AS1 Gene

Genes around ZFX-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZFX-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZFX-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZFX-AS1 Gene

Proteins for ZFX-AS1 Gene

Post-translational modifications for ZFX-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZFX-AS1 Gene

Domains & Families for ZFX-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZFX-AS1 Gene

Function for ZFX-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZFX-AS1 Gene

Localization for ZFX-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZFX-AS1 Gene

Pathways & Interactions for ZFX-AS1 Gene

SuperPathways for ZFX-AS1 Gene

No Data Available

Interacting Proteins for ZFX-AS1 Gene

Gene Ontology (GO) - Biological Process for ZFX-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZFX-AS1 Gene

Drugs & Compounds for ZFX-AS1 Gene

No Compound Related Data Available

Transcripts for ZFX-AS1 Gene

mRNA/cDNA for ZFX-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZFX-AS1 Gene

ZFX antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZFX-AS1 Gene

No ASD Table

Relevant External Links for ZFX-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZFX-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZFX-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for ZFX-AS1 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.2).

SOURCE GeneReport for Unigene cluster for ZFX-AS1 Gene:

genes like me logo Genes that share expression patterns with ZFX-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZFX-AS1 Gene

Orthologs for ZFX-AS1 Gene

Evolution for ZFX-AS1 Gene

Gene Tree for ZFX-AS1 (if available)
Gene Tree for ZFX-AS1 (if available)

No data available for Orthologs for ZFX-AS1 Gene

Paralogs for ZFX-AS1 Gene

No data available for Paralogs for ZFX-AS1 Gene

Variants for ZFX-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZFX-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1000315168 -- 24,151,371(+) CTGAA(A/G)TATTA intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000624525 -- 24,150,930(+) GAAAC(A/G)ACTTT intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001187892 -- 24,150,603(+) AGCGC(C/T)CCTGG intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001270055 -- 24,149,409(+) GCGGC(A/G)GCGGG intron-variant, upstream-variant-2KB
rs1001843566 -- 24,150,560(+) GCGGC(C/T)ACCGC intron-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for ZFX-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv504n21 CNV gain 19592680
nsv1076250 CNV deletion 25765185
nsv1145288 CNV deletion 24896259
nsv524256 CNV gain 19592680
nsv818019 CNV gain 17921354

Relevant External Links for ZFX-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZFX-AS1 Gene

Disorders for ZFX-AS1 Gene

Relevant External Links for ZFX-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ZFX-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZFX-AS1 Gene

Publications for ZFX-AS1 Gene

No publications were found for ZFX-AS1 Gene.

Products for ZFX-AS1 Gene

Sources for ZFX-AS1 Gene

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