Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZFP1 Gene

Aliases for ZFP1 Gene

  • ZFP1 Zinc Finger Protein 2 3
  • Zinc Finger Protein 475 3 4
  • ZNF475 3 4
  • Zfp-1 3 4
  • Zinc Finger Protein 1 Homolog (Mouse) 2
  • Zinc Finger Protein 1 Homolog 3
  • Zinc Finger Protein 1 2
  • ZFP161 6
  • ZF5 6

External Ids for ZFP1 Gene

Previous GeneCards Identifiers for ZFP1 Gene

  • GC16P074921
  • GC16P074961
  • GC16P073739
  • GC16P060933

Summaries for ZFP1 Gene

GeneCards Summary for ZFP1 Gene

ZFP1 (ZFP1 Zinc Finger Protein) is a Protein Coding gene. Among its related pathways are Gene Expression and Gene Expression. An important paralog of this gene is ZNF32.

UniProtKB/Swiss-Prot for ZFP1 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZFP1 Gene

Genomics for ZFP1 Gene

Regulatory Elements for ZFP1 Gene

Transcription factor binding sites by QIAGEN in the ZFP1 gene promoter:

Genomic Location for ZFP1 Gene

Start:
75,148,492 bp from pter
End:
75,172,236 bp from pter
Size:
23,745 bases
Orientation:
Plus strand

Genomic View for ZFP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZFP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZFP1 Gene

Proteins for ZFP1 Gene

  • Protein details for ZFP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6P2D0-ZFP1_HUMAN
    Recommended name:
    Zinc finger protein 1 homolog
    Protein Accession:
    Q6P2D0
    Secondary Accessions:
    • A8K5Q7
    • B4DKG9
    • Q8N188
    • Q8N9F9

    Protein attributes for ZFP1 Gene

    Size:
    407 amino acids
    Molecular mass:
    47516 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH33774.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for ZFP1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZFP1 Gene

Proteomics data for ZFP1 Gene at MOPED

Post-translational modifications for ZFP1 Gene

  • Ubiquitination at Lys74, Lys88, Lys105, Lys111, Lys114, Lys129, Lys145, and Lys196
  • Modification sites at PhosphoSitePlus

Other Protein References for ZFP1 Gene

No data available for DME Specific Peptides for ZFP1 Gene

Domains for ZFP1 Gene

Gene Families for ZFP1 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type

Protein Domains for ZFP1 Gene

Suggested Antigen Peptide Sequences for ZFP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6P2D0

UniProtKB/Swiss-Prot:

ZFP1_HUMAN :
  • Q6P2D0
Domain:
  • Contains 1 KRAB domain.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Similarity:
  • Contains 8 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZFP1: view

Function for ZFP1 Gene

Molecular function for ZFP1 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZFP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding IEA --
GO:0003700 sequence-specific DNA binding transcription factor activity IBA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZFP1: view

miRNA for ZFP1 Gene

miRTarBase miRNAs that target ZFP1

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZFP1 Gene

Localization for ZFP1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZFP1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZFP1 Gene COMPARTMENTS Subcellular localization image for ZFP1 gene
Compartment Confidence
nucleus 4

Gene Ontology (GO) - Cellular Components for ZFP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005622 intracellular --
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZFP1: view

Pathways for ZFP1 Gene

SuperPathways for ZFP1 Gene

Superpath Contained pathways
1 Gene Expression
genes like me logo Genes that share pathways with ZFP1: view

Pathways by source for ZFP1 Gene

2 Reactome pathways for ZFP1 Gene

Interacting Proteins for ZFP1 Gene

Gene Ontology (GO) - Biological Process for ZFP1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IBA --
genes like me logo Genes that share ontologies with ZFP1: view

Transcripts for ZFP1 Gene

Unigene Clusters for ZFP1 Gene

ZFP1 zinc finger protein:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZFP1 Gene

ExUns: 1a · 1b ^ 2a · 2b
SP1: -
SP2:

Relevant External Links for ZFP1 Gene

GeneLoc Exon Structure for
ZFP1
ECgene alternative splicing isoforms for
ZFP1

Expression for ZFP1 Gene

mRNA expression in normal human tissues for ZFP1 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZFP1 Gene

SOURCE GeneReport for Unigene cluster for ZFP1 Gene Hs.388813

genes like me logo Genes that share expressions with ZFP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZFP1 Gene

Orthologs for ZFP1 Gene

This gene was present in the common ancestor of animals.

Orthologs for ZFP1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZFP1 35
  • 99.67 (n)
  • 100 (a)
ZFP1 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZFP1 35
  • 89.84 (n)
  • 92.14 (a)
ZFP1 36
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZFP1 35
  • 90.86 (n)
  • 93.27 (a)
ZFP1 36
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Zfp1 35
  • 82.88 (n)
  • 86.6 (a)
Zfp1 16
Zfp1 36
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 39 (a)
OneToMany
-- 36
  • 40 (a)
OneToMany
-- 36
  • 46 (a)
OneToMany
-- 36
  • 36 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Zfp1 35
  • 82.05 (n)
  • 86.35 (a)
zebrafish
(Danio rerio)
Actinopterygii BX649328.1 36
  • 36 (a)
ManyToMany
CABZ01015530.1 36
  • 39 (a)
ManyToMany
CABZ01071909.3 36
  • 37 (a)
ManyToMany
CABZ01081748.1 36
  • 40 (a)
ManyToMany
CABZ01081749.1 36
  • 35 (a)
ManyToMany
CR788316.4 36
  • 38 (a)
ManyToMany
si:ch211-161m3.4 36
  • 34 (a)
ManyToMany
si:ch73-266f23.3 36
  • 37 (a)
ManyToMany
si:ch73-57f22.2 36
  • 29 (a)
ManyToMany
si:dkey-240n22.8 36
  • 34 (a)
ManyToMany
si:dkey-262g12.7 36
  • 41 (a)
ManyToMany
si:dkey-77f5.14 36
  • 32 (a)
ManyToMany
si:dkey-77f5.15 36
  • 25 (a)
ManyToMany
si:dkey-77p23.2 36
  • 38 (a)
ManyToMany
zgc:175008 36
  • 39 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta Kr-h1 36
  • 13 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea M03D4.4 36
  • 16 (a)
OneToMany
Species with no ortholog for ZFP1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ZFP1 Gene

ENSEMBL:
Gene Tree for ZFP1 (if available)
TreeFam:
Gene Tree for ZFP1 (if available)

Paralogs for ZFP1 Gene

Paralogs for ZFP1 Gene

Selected SIMAP similar genes for ZFP1 Gene using alignment to 5 proteins:

Pseudogenes.org Pseudogenes for ZFP1 Gene

genes like me logo Genes that share paralogs with ZFP1: view

Variants for ZFP1 Gene

Sequence variations from dbSNP and Humsavar for ZFP1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs764551 -- 75,170,384(+) TCAAG(A/C)GGGTG utr-variant-3-prime
rs1073429 -- 75,158,153(-) atgaa(C/G)ataaa intron-variant
rs1114513 -- 75,158,338(-) AAAAA(A/G)AAATA intron-variant
rs1862739 -- 75,151,321(-) attaa(A/G)taaca intron-variant
rs1862740 -- 75,151,254(-) tgttt(A/T)aaata intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZFP1 Gene

Variant ID Type Subtype PubMed ID
nsv833282 CNV Gain+Loss 17160897
esv2714705 CNV Deletion 23290073
esv2714706 CNV Deletion 23290073
nsv7286 OTHER Inversion 18451855

Relevant External Links for ZFP1 Gene

HapMap Linkage Disequilibrium report
ZFP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZFP1 Gene

Disorders for ZFP1 Gene

Relevant External Links for ZFP1

Genetic Association Database (GAD)
ZFP1
Human Genome Epidemiology (HuGE) Navigator
ZFP1
genes like me logo Genes that share disorders with ZFP1: view

No data available for UniProtKB/Swiss-Prot for ZFP1 Gene

Publications for ZFP1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Fine mapping and association studies of a high-density lipoprotein cholesterol linkage region on chromosome 16 in French-Canadian subjects. (PMID: 19844255) Dastani Z. … Genest J. (Eur. J. Hum. Genet. 2010) 3 48
  4. Structure, expression and chromosomal localization of Zfp-1, a murine zinc finger protein gene. (PMID: 2574853) Chowdhury K. … Gruss P. (Nucleic Acids Res. 1989) 2 3
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ZFP1 Gene

Sources for ZFP1 Gene

Back to Top

Content