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Aliases for ZEB1-AS1 Gene

Subcategory (RNA class) for ZEB1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for ZEB1-AS1 Gene

  • ZEB1 Antisense RNA 1 2 3 5
  • ZEB1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for ZEB1-AS1 Gene

Previous GeneCards Identifiers for ZEB1-AS1 Gene

  • GC10M031606
  • GC10M031495

Summaries for ZEB1-AS1 Gene

GeneCards Summary for ZEB1-AS1 Gene

ZEB1-AS1 (ZEB1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZEB1-AS1 Gene

Genomics for ZEB1-AS1 Gene

Regulatory Elements for ZEB1-AS1 Gene

Enhancers for ZEB1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F030500 1.6 FANTOM5 Ensembl ENCODE 19.1 +816.8 816847 6.8 ATF1 ZFP64 ZNF121 ZNF202 JUNB REST TBX21 ZNF623 ZNF518A ZNF264 MTPAP MAP3K8 ZEB1-AS1 ZNF438 SPTLC1P1 DDX10P1 HNRNPA1P32 GC10P030465
GH10F030699 1.5 FANTOM5 Ensembl ENCODE 18.4 +617.0 617047 7.6 TBP PKNOX1 CBX3 ZFP64 YBX1 RAD21 CBX5 ZNF366 SCRT2 ZNF143 ZEB1-AS1 SVILP1 LOC105376480
GH10F031316 1.1 ENCODE 20.9 +0.5 471 6.0 HDGF PKNOX1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 MTPAP ZEB1-AS1 ENSG00000226842 ZEB1
GH10F030984 1 Ensembl ENCODE 18.5 +334.7 334741 3.3 ZFP64 JUN ZNF140 MAX ZNF514 ZNF101 ZNF433 ZBTB11 CEBPB ZBTB8A ZEB1-AS1 ZNF438 MTPAP DDX10P1 ENSG00000272381 GC10M030988 GC10M030926
GH10F031918 0.9 Ensembl 19.1 -598.9 -598854 1.4 ARNT ZNF493 ZFP64 ARID4B ZSCAN9 RAD21 ZNF354C ZNF138 SCRT2 ZNF143 ENSG00000226842 ZEB1-AS1 KIF5B RPS4XP11 SPTLC1P1 DDX10P1 CCDC7 ARHGAP12 HMGB1P7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZEB1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZEB1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for ZEB1-AS1 Gene

31,206,278 bp from pter
31,320,447 bp from pter
114,170 bases
Minus strand

Genomic View for ZEB1-AS1 Gene

Genes around ZEB1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZEB1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZEB1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZEB1-AS1 Gene

Proteins for ZEB1-AS1 Gene

Post-translational modifications for ZEB1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZEB1-AS1 Gene

Domains & Families for ZEB1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZEB1-AS1 Gene

Function for ZEB1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZEB1-AS1 Gene

Localization for ZEB1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZEB1-AS1 Gene

Pathways & Interactions for ZEB1-AS1 Gene

SuperPathways for ZEB1-AS1 Gene

No Data Available

Interacting Proteins for ZEB1-AS1 Gene

Gene Ontology (GO) - Biological Process for ZEB1-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZEB1-AS1 Gene

Transcripts for ZEB1-AS1 Gene

mRNA/cDNA for ZEB1-AS1 Gene

(4) Additional mRNA sequences :
(9) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZEB1-AS1 Gene

ZEB1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZEB1-AS1 Gene

No ASD Table

Relevant External Links for ZEB1-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZEB1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZEB1-AS1 Gene

SOURCE GeneReport for Unigene cluster for ZEB1-AS1 Gene:

genes like me logo Genes that share expression patterns with ZEB1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZEB1-AS1 Gene

Orthologs for ZEB1-AS1 Gene

Evolution for ZEB1-AS1 Gene

Gene Tree for ZEB1-AS1 (if available)
Gene Tree for ZEB1-AS1 (if available)

No data available for Orthologs for ZEB1-AS1 Gene

Paralogs for ZEB1-AS1 Gene

No data available for Paralogs for ZEB1-AS1 Gene

Variants for ZEB1-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZEB1-AS1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs11008457 -- 31,317,350(+) AAAAC(A/G)TTGTA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs111494832 -- 31,317,013(+) AGTTA(A/C)CTGAA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs111780250 -- 31,320,878(+) CGCCC(C/T)GGTAC intron-variant, upstream-variant-2KB
rs112732522 -- 31,316,254(+) TCAGC(A/C)TATAT intron-variant
rs113112857 -- 31,319,544(+) CCCGC(C/T)GCCCC intron-variant, nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ZEB1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831824 CNV loss 17160897

Relevant External Links for ZEB1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZEB1-AS1 Gene

Disorders for ZEB1-AS1 Gene

Relevant External Links for ZEB1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ZEB1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZEB1-AS1 Gene

Publications for ZEB1-AS1 Gene

  1. Upregulation of long noncoding RNA ZEB1-AS1 promotes tumor metastasis and predicts poor prognosis in hepatocellular carcinoma. (PMID: 26073087) Li T. … Zhu Z. (Oncogene 2015) 3 64
  2. Expression of long non-coding RNA ZEB1-AS1 in esophageal squamous cell carcinoma and its correlation with tumor progression and patient survival. (PMID: 26617942) Wang Y.L. … Wang Z.M. (Int J Clin Exp Pathol 2015) 3 64
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for ZEB1-AS1 Gene

Sources for ZEB1-AS1 Gene

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