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Aliases for ZDHHC8P1 Gene

Aliases for ZDHHC8P1 Gene

  • Zinc Finger DHHC-Type Containing 8 Pseudogene 1 2 3 5
  • Zinc Finger, DHHC-Type Containing 8 Pseudogene 2 3
  • ZDHHC8P 3

External Ids for ZDHHC8P1 Gene

Previous HGNC Symbols for ZDHHC8P1 Gene

  • ZDHHC8P

Previous GeneCards Identifiers for ZDHHC8P1 Gene

  • GC22M023734
  • GC22M006700

Summaries for ZDHHC8P1 Gene

GeneCards Summary for ZDHHC8P1 Gene

ZDHHC8P1 (Zinc Finger DHHC-Type Containing 8 Pseudogene 1) is a Pseudogene.

Additional gene information for ZDHHC8P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZDHHC8P1 Gene

Genomics for ZDHHC8P1 Gene

Regulatory Elements for ZDHHC8P1 Gene

Enhancers for ZDHHC8P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H023400 1.1 ENCODE dbSUPER 47 +0.7 693 2.8 RB1 ZBTB40 RAD21 TCF12 GLIS2 ZNF143 SP3 SP5 YY2 ZEB2 ZDHHC8P1 ENSG00000248409
GH22H023404 0.9 ENCODE 47.5 -2.1 -2123 0.2 ELF3 MLX ARID4B RAD21 ZSCAN9 RARA SLC30A9 ZNF143 RCOR1 MIXL1 ZDHHC8P1 ENSG00000248409 LINC01659
GH22H024010 1.4 ENCODE dbSUPER 27.8 -608.9 -608917 2.5 PKNOX1 FOXA2 ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF143 ZNF207 FOS ENSG00000272973 ZDHHC8P1 ZNF70 SPECC1L MIF-AS1 SNRPD3 SUSD2 RN7SL268P GNAZ ENSG00000272578
GH22H023382 1.2 FANTOM5 Ensembl ENCODE 16.3 +18.7 18731 2 KLF1 SP2 ZIC2 GLIS2 ZFHX2 POLR2A GLIS1 EGR2 ZDHHC8P1 CES5AP1 LINC02556
GH22H024242 1.6 FANTOM5 Ensembl ENCODE 11 -842.5 -842503 6.1 HDGF ARNT ZNF493 ZFP64 ARID4B SIN3A GLI4 ZBTB7B ZNF207 ZNF143 ENSG00000272578 ZNF70 SPECC1L POM121L9P ENSG00000232545 ENSG00000272973 SNRPD3 MIF-AS1 RN7SL268P SUSD2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Promoters for ZDHHC8P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000144249 26 601 RB1 ZBTB40 RAD21 GLIS2 ZNF143 SP3 SP5 YY2 ZEB2 REST

Genomic Locations for ZDHHC8P1 Gene

Genomic Locations for ZDHHC8P1 Gene
chr22:23,390,605-23,402,726
(GRCh38/hg38)
Size:
12,122 bases
Orientation:
Minus strand
chr22:23,732,792-23,744,913
(GRCh37/hg19)

Genomic View for ZDHHC8P1 Gene

Genes around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZDHHC8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZDHHC8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZDHHC8P1 Gene

Proteins for ZDHHC8P1 Gene

Post-translational modifications for ZDHHC8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZDHHC8P1 Gene

Domains & Families for ZDHHC8P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZDHHC8P1 Gene

Function for ZDHHC8P1 Gene

Phenotypes From GWAS Catalog for ZDHHC8P1 Gene

Phenotypes for ZDHHC8P1 Gene

genes like me logo Genes that share phenotypes with ZDHHC8P1: view

Animal Model Products

Inhibitory RNA Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZDHHC8P1 Gene

Localization for ZDHHC8P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZDHHC8P1 Gene

Pathways & Interactions for ZDHHC8P1 Gene

SuperPathways for ZDHHC8P1 Gene

No Data Available

Interacting Proteins for ZDHHC8P1 Gene

Gene Ontology (GO) - Biological Process for ZDHHC8P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZDHHC8P1 Gene

Drugs & Compounds for ZDHHC8P1 Gene

No Compound Related Data Available

Transcripts for ZDHHC8P1 Gene

mRNA/cDNA for ZDHHC8P1 Gene

Unigene Clusters for ZDHHC8P1 Gene

Zinc finger, DHHC-type containing 8 pseudogene 1:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZDHHC8P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7
SP1: - -
SP2: - - -
SP3:
SP4: - -

Relevant External Links for ZDHHC8P1 Gene

GeneLoc Exon Structure for
ZDHHC8P1
ECgene alternative splicing isoforms for
ZDHHC8P1

Expression for ZDHHC8P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZDHHC8P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZDHHC8P1 Gene

This gene is overexpressed in Ovary (x11.0) and Prostate (x5.0).

NURSA nuclear receptor signaling pathways regulating expression of ZDHHC8P1 Gene:

ZDHHC8P1

SOURCE GeneReport for Unigene cluster for ZDHHC8P1 Gene:

Hs.386693
genes like me logo Genes that share expression patterns with ZDHHC8P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZDHHC8P1 Gene

Orthologs for ZDHHC8P1 Gene

Evolution for ZDHHC8P1 Gene

ENSEMBL:
Gene Tree for ZDHHC8P1 (if available)
TreeFam:
Gene Tree for ZDHHC8P1 (if available)

No data available for Orthologs for ZDHHC8P1 Gene

Paralogs for ZDHHC8P1 Gene

No data available for Paralogs for ZDHHC8P1 Gene

Variants for ZDHHC8P1 Gene

Sequence variations from dbSNP and Humsavar for ZDHHC8P1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000229526 -- 23,393,148(+) AGCAG(C/T)CCCCT intron-variant, upstream-variant-2KB
rs1000262337 -- 23,392,952(+) CCCAT(A/G)CCCAC intron-variant, upstream-variant-2KB
rs1000325996 -- 23,402,407(+) GCGTC(C/G)AGGAC nc-transcript-variant
rs1000414666 -- 23,396,931(+) TTGCC(C/T)GAGGA intron-variant
rs1000712856 -- 23,401,816(+) AGGAG(G/T)GGGGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZDHHC8P1 Gene

Variant ID Type Subtype PubMed ID
nsv9876 CNV gain+loss 18304495
nsv829099 CNV gain 20364138
nsv7350 OTHER inversion 18451855
nsv588601 CNV gain 21841781
nsv526567 CNV gain 19592680
nsv522451 CNV loss 19592680
nsv469702 CNV gain 16826518
nsv1066891 CNV gain 25217958
nsv1059951 CNV gain 25217958
nsv1057910 CNV gain 25217958
esv3893457 CNV gain 25118596
esv3575443 CNV gain 25503493
esv2762117 CNV gain 21179565
esv2724041 CNV deletion 23290073
dgv8039n54 CNV gain 21841781
dgv4528n100 CNV gain 25217958

Relevant External Links for ZDHHC8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZDHHC8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZDHHC8P1 Gene

Disorders for ZDHHC8P1 Gene

Relevant External Links for ZDHHC8P1

Genetic Association Database (GAD)
ZDHHC8P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZDHHC8P1

No disorders were found for ZDHHC8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZDHHC8P1 Gene

Publications for ZDHHC8P1 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M … Probst-Hensch NM (The Journal of allergy and clinical immunology 2012) 45 60
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung HC … Singleton A (The Lancet. Neurology 2006) 45 60
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3 60

Products for ZDHHC8P1 Gene

Sources for ZDHHC8P1 Gene

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