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Aliases for ZDHHC8P1 Gene

Aliases for ZDHHC8P1 Gene

  • Zinc Finger DHHC-Type Containing 8 Pseudogene 1 2 3 5
  • Zinc Finger, DHHC-Type Containing 8 Pseudogene 2 3
  • ZDHHC8P 3

External Ids for ZDHHC8P1 Gene

Previous HGNC Symbols for ZDHHC8P1 Gene

  • ZDHHC8P

Previous GeneCards Identifiers for ZDHHC8P1 Gene

  • GC22M023734
  • GC22M006700

Summaries for ZDHHC8P1 Gene

GeneCards Summary for ZDHHC8P1 Gene

ZDHHC8P1 (Zinc Finger DHHC-Type Containing 8 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZDHHC8P1 Gene

Genomics for ZDHHC8P1 Gene

Regulatory Elements for ZDHHC8P1 Gene

Enhancers for ZDHHC8P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F023404 0.9 ENCODE 47.5 -2.1 -2123 0.2 ELF3 MLX ARID4B ZNF48 ZSCAN9 RAD21 RARA SLC30A9 ZNF143 MIXL1 ZDHHC8P1 ENSG00000248409 LINC01659
GH22F023400 0.9 ENCODE 47 +0.7 693 2.8 RAD21 GLIS2 ZNF143 ZNF263 SP3 YY2 SP5 ZEB2 MIER2 REST ZDHHC8P1 ENSG00000248409
GH22F023382 1.2 FANTOM5 Ensembl ENCODE 16.3 +18.7 18731 2.0 KLF1 SP2 ZIC2 GLIS2 ZFHX2 POLR2A GLIS1 EGR2 ZDHHC8P1 CES5AP1 LOC102724679
GH22F023458 1 Ensembl ENCODE 17.6 -56.5 -56515 0.9 SOX5 HDGF USF1 SAP130 SP5 ZIC2 ZBTB40 RAD51 POLR2A EED ZDHHC8P1 ENSG00000227755 PIR54983 LINC01658
GH22F022800 0.8 ENCODE 10.7 +601.8 601799 0.2 ZFP64 ZNF140 ZNF266 ZNF101 ZNF664 ZNF791 ZNF138 ZNF433 ZNF639 ZNF654 IGLV5-52 ENSG00000234630 ENSG00000272779 ZNF70 ENSG00000272578 IGLV2-5 IGLV3-4 ZDHHC8P1 GNAZ ENSG00000274381
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Promoters for ZDHHC8P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001842287 26 1001 CTCF KLF1 TAL1 ZIC2 RAD21 CCNT2 GLIS2 POLR2A PATZ1 ZNF143

Genomic Location for ZDHHC8P1 Gene

Chromosome:
22
Start:
23,390,605 bp from pter
End:
23,402,726 bp from pter
Size:
12,122 bases
Orientation:
Minus strand

Genomic View for ZDHHC8P1 Gene

Genes around ZDHHC8P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZDHHC8P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZDHHC8P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZDHHC8P1 Gene

Proteins for ZDHHC8P1 Gene

Post-translational modifications for ZDHHC8P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZDHHC8P1 Gene

Domains & Families for ZDHHC8P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZDHHC8P1 Gene

Function for ZDHHC8P1 Gene

Phenotypes for ZDHHC8P1 Gene

genes like me logo Genes that share phenotypes with ZDHHC8P1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZDHHC8P1 Gene

Localization for ZDHHC8P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZDHHC8P1 Gene

Pathways & Interactions for ZDHHC8P1 Gene

SuperPathways for ZDHHC8P1 Gene

No Data Available

Interacting Proteins for ZDHHC8P1 Gene

Gene Ontology (GO) - Biological Process for ZDHHC8P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZDHHC8P1 Gene

Transcripts for ZDHHC8P1 Gene

mRNA/cDNA for ZDHHC8P1 Gene

Unigene Clusters for ZDHHC8P1 Gene

Zinc finger, DHHC-type containing 8 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZDHHC8P1 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7
SP1: - -
SP2: - - -
SP3:
SP4: - -

Relevant External Links for ZDHHC8P1 Gene

GeneLoc Exon Structure for
ZDHHC8P1
ECgene alternative splicing isoforms for
ZDHHC8P1

Expression for ZDHHC8P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZDHHC8P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZDHHC8P1 Gene

This gene is overexpressed in Ovary (x11.0) and Prostate (x5.0).

NURSA nuclear receptor signaling pathways regulating expression of ZDHHC8P1 Gene:

ZDHHC8P1

SOURCE GeneReport for Unigene cluster for ZDHHC8P1 Gene:

Hs.386693
genes like me logo Genes that share expression patterns with ZDHHC8P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZDHHC8P1 Gene

Orthologs for ZDHHC8P1 Gene

Evolution for ZDHHC8P1 Gene

ENSEMBL:
Gene Tree for ZDHHC8P1 (if available)
TreeFam:
Gene Tree for ZDHHC8P1 (if available)

No data available for Orthologs for ZDHHC8P1 Gene

Paralogs for ZDHHC8P1 Gene

No data available for Paralogs for ZDHHC8P1 Gene

Variants for ZDHHC8P1 Gene

Sequence variations from dbSNP and Humsavar for ZDHHC8P1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs10533737 -- 23,393,243(+) TGCCC(-/CT)TGTGT intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs10643117 -- 23,393,639(+) CCTCA(-/AG/GA/GC)ACGAG intron-variant, downstream-variant-500B, reference, frameshift-variant
rs11090244 -- 23,401,974(+) ACTGT(C/G)AGACT intron-variant
rs111638105 -- 23,403,967(+) TCTGT(A/G)GCCCT upstream-variant-2KB
rs111721759 -- 23,397,659(+) TGCCC(C/T)AGCCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZDHHC8P1 Gene

Variant ID Type Subtype PubMed ID
dgv4528n100 CNV gain 25217958
dgv8039n54 CNV gain 21841781
esv2724041 CNV deletion 23290073
esv2762117 CNV gain 21179565
esv3575443 CNV gain 25503493
esv3893457 CNV gain 25118596
nsv1057910 CNV gain 25217958
nsv1059951 CNV gain 25217958
nsv1066891 CNV gain 25217958
nsv469702 CNV gain 16826518
nsv522451 CNV loss 19592680
nsv526567 CNV gain 19592680
nsv588601 CNV gain 21841781
nsv9876 CNV gain+loss 18304495
nsv829099 CNV gain 20364138
nsv7350 OTHER inversion 18451855

Relevant External Links for ZDHHC8P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZDHHC8P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ZDHHC8P1 Gene

Disorders for ZDHHC8P1 Gene

Relevant External Links for ZDHHC8P1

Genetic Association Database (GAD)
ZDHHC8P1
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZDHHC8P1

No disorders were found for ZDHHC8P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZDHHC8P1 Gene

Publications for ZDHHC8P1 Gene

  1. Genome-wide association study of lung function decline in adults with and without asthma. (PMID: 22424883) Imboden M. … Probst-Hensch N.M. (J. Allergy Clin. Immunol. 2012) 46 64
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  3. Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. (PMID: 17052657) Fung H.C. … Singleton A. (Lancet Neurol 2006) 46 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  5. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3 64

Products for ZDHHC8P1 Gene

Sources for ZDHHC8P1 Gene

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