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Aliases for ZDHHC20P1 Gene

Subcategory (RNA class) for ZDHHC20P1 Gene

lncRNA

Aliases for ZDHHC20P1 Gene

  • Zinc Finger DHHC-Type Containing 20 Pseudogene 1 2 3 5

External Ids for ZDHHC20P1 Gene

ORGUL Members for ZDHHC20P1 Gene

Previous GeneCards Identifiers for ZDHHC20P1 Gene

  • GC06U901071

Summaries for ZDHHC20P1 Gene

GeneCards Summary for ZDHHC20P1 Gene

ZDHHC20P1 (Zinc Finger DHHC-Type Containing 20 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZDHHC20P1 Gene

Genomics for ZDHHC20P1 Gene

Regulatory Elements for ZDHHC20P1 Gene

Enhancers for ZDHHC20P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G029708 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.8 -841 2.6 PKNOX1 BHLHE40 CEBPB CEBPG EBF1 ATF2 IKZF1 PRDM1 TRIM28 HLA-F ZFP57 HLA-J IFITM4P HLA-H HCG4P5 ZNRD1ASP OR2H1 HLA-A HLA-K
GH06G029705 0.7 ENCODE 0.7 +2.7 2729 0.2 CTCF ZNF654 RB1 ETV1 TRIM22 REST ZIC2 RAD21 RFX5 ZNF366 HLA-F ZFP57 HLA-H HLA-W ZDHHC20P1
GH06G029702 0.7 ENCODE 0.4 +5.8 5849 0.2 ZNF263 CTCF ZNF654 RB1 NR2F1 TRIM22 ZBTB8A REST ZNF2 ZNF48 IFITM4P ZFP57 HLA-J HCG4 ZDHHC20P1
GH06G029685 0.7 ENCODE 0.3 +22.6 22609 0.2 SCRT1 CTCF ZNF654 TRIM22 REST MNT RAD21 JUND ZNF366 SCRT2 ZFP57 HLA-H ZDHHC20P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZDHHC20P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZDHHC20P1 Gene

Chromosome:
6
Start:
29,708,125 bp from pter
End:
29,708,547 bp from pter
Size:
423 bases
Orientation:
Minus strand

Genomic View for ZDHHC20P1 Gene

Genes around ZDHHC20P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZDHHC20P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZDHHC20P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for ZDHHC20P1 Gene

Post-translational modifications for ZDHHC20P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZDHHC20P1 Gene

Domains & Families for ZDHHC20P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZDHHC20P1 Gene

Function for ZDHHC20P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZDHHC20P1 Gene

Localization for ZDHHC20P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZDHHC20P1 Gene

Pathways & Interactions for ZDHHC20P1 Gene

SuperPathways for ZDHHC20P1 Gene

No Data Available

Interacting Proteins for ZDHHC20P1 Gene

Gene Ontology (GO) - Biological Process for ZDHHC20P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZDHHC20P1 Gene

Drugs & Compounds for ZDHHC20P1 Gene

No Compound Related Data Available

Transcripts for ZDHHC20P1 Gene

mRNA/cDNA for ZDHHC20P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZDHHC20P1 Gene

No ASD Table

Relevant External Links for ZDHHC20P1 Gene

GeneLoc Exon Structure for
ZDHHC20P1
ECgene alternative splicing isoforms for
ZDHHC20P1

Expression for ZDHHC20P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZDHHC20P1 Gene

mRNA differential expression in normal tissues according to GTEx for ZDHHC20P1 Gene

This gene is overexpressed in Spleen (x5.8) and Testis (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of ZDHHC20P1 Gene:

ZDHHC20P1
genes like me logo Genes that share expression patterns with ZDHHC20P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZDHHC20P1 Gene

Orthologs for ZDHHC20P1 Gene

Evolution for ZDHHC20P1 Gene

ENSEMBL:
Gene Tree for ZDHHC20P1 (if available)
TreeFam:
Gene Tree for ZDHHC20P1 (if available)

No data available for Orthologs for ZDHHC20P1 Gene

Paralogs for ZDHHC20P1 Gene

No data available for Paralogs for ZDHHC20P1 Gene

Variants for ZDHHC20P1 Gene

Relevant External Links for ZDHHC20P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZDHHC20P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZDHHC20P1 Gene

Disorders for ZDHHC20P1 Gene

No disorders were found for ZDHHC20P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ZDHHC20P1 Gene

Publications for ZDHHC20P1 Gene

No publications were found for ZDHHC20P1 Gene.

Products for ZDHHC20P1 Gene

Sources for ZDHHC20P1 Gene

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