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Aliases for ZCCHC23 Gene

Aliases for ZCCHC23 Gene

  • Zinc Finger CCHC-Type Containing 23 2 3
  • AC004051.2 5

External Ids for ZCCHC23 Gene

Previous GeneCards Identifiers for ZCCHC23 Gene

  • GC04P110443
  • GC04U900948

Summaries for ZCCHC23 Gene

GeneCards Summary for ZCCHC23 Gene

ZCCHC23 (Zinc Finger CCHC-Type Containing 23) is a Protein Coding gene. GO annotations related to this gene include nucleic acid binding.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZCCHC23 Gene

Genomics for ZCCHC23 Gene

Regulatory Elements for ZCCHC23 Gene

Enhancers for ZCCHC23 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F108830 0.5 ENCODE 11.6 -472.3 -472256 0.2 INSM2 FEZF1 ZNF600 ZNF391 GFI1B ZNF501 ZNF843 OSR2 BCL11A ZNF610 COL25A1 ZCCHC23 ETNPPL GC04M108805 GC04M108908
GH04F109365 0.4 ENCODE 10.9 +63.1 63086 0.8 ZNF792 JUN FOSL1 ZNF316 ZFHX2 CBX5 EED ETV6 ZNF600 NFE2 ZCCHC23 COL25A1 SEC24B-AS1 GC04P109364 PIR37678
GH04F109367 0.4 ENCODE 10.9 +65.6 65561 1.2 COL25A1 ZCCHC23 SEC24B GC04P109364 PIR37678
GH04F109302 0.6 ENCODE 0.8 0.0 -38 1.2 TBP ARNT ZNF76 KLF17 ZNF2 GLIS2 GATA2 ZNF366 SCRT2 SP3 RBMXP4 COL25A1 ZCCHC23
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around ZCCHC23 on UCSC Golden Path with GeneCards custom track

Promoters for ZCCHC23 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001247177 -135 1400 TBP ARNT ZNF76 KLF17 FEZF1 ZNF2 GLIS2 ZNF366 SCRT2 SP3

Genomic Location for ZCCHC23 Gene

Chromosome:
4
Start:
109,303,035 bp from pter
End:
109,320,823 bp from pter
Size:
17,789 bases
Orientation:
Plus strand

Genomic View for ZCCHC23 Gene

Genes around ZCCHC23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZCCHC23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZCCHC23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ZCCHC23 Gene

Proteins for ZCCHC23 Gene

  • Protein details for ZCCHC23 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZST2-ZCH23_HUMAN
    Recommended name:
    Zinc finger CCHC domain-containing protein 23
    Protein Accession:
    Q6ZST2

    Protein attributes for ZCCHC23 Gene

    Size:
    131 amino acids
    Molecular mass:
    14410 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZCCHC23 Gene

Post-translational modifications for ZCCHC23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZCCHC23 Gene

Domains & Families for ZCCHC23 Gene

Gene Families for ZCCHC23 Gene

Protein Domains for ZCCHC23 Gene

Blocks:
InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for ZCCHC23 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6ZST2

UniProtKB/Swiss-Prot:

ZCH23_HUMAN :
  • Contains 1 CCHC-type zinc finger.
Similarity:
  • Contains 1 CCHC-type zinc finger.
genes like me logo Genes that share domains with ZCCHC23: view

Function for ZCCHC23 Gene

Gene Ontology (GO) - Molecular Function for ZCCHC23 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
GO:0008270 zinc ion binding IEA --
genes like me logo Genes that share ontologies with ZCCHC23: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZCCHC23 Gene

Localization for ZCCHC23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZCCHC23 Gene

Pathways & Interactions for ZCCHC23 Gene

SuperPathways for ZCCHC23 Gene

No Data Available

Interacting Proteins for ZCCHC23 Gene

Gene Ontology (GO) - Biological Process for ZCCHC23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZCCHC23 Gene

Transcripts for ZCCHC23 Gene

mRNA/cDNA for ZCCHC23 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZCCHC23 Gene

Zinc finger, CCHC domain containing 23:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZCCHC23 Gene

No ASD Table

Relevant External Links for ZCCHC23 Gene

GeneLoc Exon Structure for
ZCCHC23
ECgene alternative splicing isoforms for
ZCCHC23

Expression for ZCCHC23 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZCCHC23 Gene:

ZCCHC23

SOURCE GeneReport for Unigene cluster for ZCCHC23 Gene:

Hs.518784
No Expression Related Data Available

Primer Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for ZCCHC23 Gene

Orthologs for ZCCHC23 Gene

Evolution for ZCCHC23 Gene

ENSEMBL:
Gene Tree for ZCCHC23 (if available)
TreeFam:
Gene Tree for ZCCHC23 (if available)

No data available for Orthologs for ZCCHC23 Gene

Paralogs for ZCCHC23 Gene

No data available for Paralogs for ZCCHC23 Gene

Variants for ZCCHC23 Gene

Relevant External Links for ZCCHC23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZCCHC23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZCCHC23 Gene

Disorders for ZCCHC23 Gene

Relevant External Links for ZCCHC23

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZCCHC23

No disorders were found for ZCCHC23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZCCHC23 Gene

Publications for ZCCHC23 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64

Products for ZCCHC23 Gene

Sources for ZCCHC23 Gene

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