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Aliases for ZC3H18-AS1 Gene

Aliases for ZC3H18-AS1 Gene

  • ZC3H18 Antisense RNA 1 (Head To Head) 2 3
  • Long Intergenic Non-Protein Coding RNA 859 2 3
  • Chromosome 16 Open Reading Frame 85 2
  • LINC00859 3
  • C16orf85 3

External Ids for ZC3H18-AS1 Gene

Previous HGNC Symbols for ZC3H18-AS1 Gene

  • C16orf85
  • LINC00859

Previous GeneCards Identifiers for ZC3H18-AS1 Gene

  • GC16U901687

Summaries for ZC3H18-AS1 Gene

GeneCards Summary for ZC3H18-AS1 Gene

ZC3H18-AS1 (ZC3H18 Antisense RNA 1 (Head To Head)) is a Genetic Locus.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZC3H18-AS1 Gene

Genomics for ZC3H18-AS1 Gene

Regulatory Elements for ZC3H18-AS1 Gene

Enhancers for ZC3H18-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16F088561 1.2 Ensembl ENCODE 0.8 +5.0 4987 1.0 HDGF HDAC1 ATF1 CBX3 PKNOX1 TBL1XR1 ARNT ARID4B RAD21 SCRT2 ZC3H18-AS1 LOC100128882
GH16F088566 0.9 Ensembl ENCODE 0.8 +0.7 706 0.4 PKNOX1 ZFHX2 RFX1 GLIS1 KLF9 BMI1 ZBTB33 ZIC2 EGR2 ZC3H18-AS1 LOC100128882
GH16F088558 1.1 Ensembl ENCODE 0.4 +8.0 8006 0.6 HDAC1 PKNOX1 ARID4B SIN3A NFXL1 ZNF2 RAD21 SLC30A9 SCRT2 ZNF143 ENSG00000260671 ZC3H18-AS1 LOC100128882
GH16F088529 1.2 Ensembl ENCODE 0.3 +34.1 34093 7.9 ARID4B SIN3A YY1 ZNF121 GLIS2 GATA2 ELK1 PAF1 SP5 REST LOC100128882 RNF166 ZC3H18-AS1
GH16F088552 0.7 ENCODE 0.4 +14.2 14169 0.7 KLF11 USF2 DMAP1 ZBTB7A ZNF48 RAD51 ZGPAT IKZF1 MXD3 NR2C2 ZFPM1 ACSF3 ZC3H18-AS1 LOC100128882
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZC3H18-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ZC3H18-AS1 Gene

88,554,002 bp from pter
88,567,106 bp from pter
13,105 bases
Minus strand

Genomic View for ZC3H18-AS1 Gene

Genes around ZC3H18-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZC3H18-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZC3H18-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZC3H18-AS1 Gene

Proteins for ZC3H18-AS1 Gene

Post-translational modifications for ZC3H18-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZC3H18-AS1 Gene

Domains & Families for ZC3H18-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZC3H18-AS1 Gene

Function for ZC3H18-AS1 Gene

Phenotypes for ZC3H18-AS1 Gene

GenomeRNAi human phenotypes for ZC3H18-AS1:
genes like me logo Genes that share phenotypes with ZC3H18-AS1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZC3H18-AS1 Gene

Localization for ZC3H18-AS1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZC3H18-AS1 gene
Compartment Confidence
mitochondrion 2
nucleus 2
cytosol 2
extracellular 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ZC3H18-AS1 Gene

Pathways & Interactions for ZC3H18-AS1 Gene

SuperPathways for ZC3H18-AS1 Gene

No Data Available

Interacting Proteins for ZC3H18-AS1 Gene

Gene Ontology (GO) - Biological Process for ZC3H18-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for ZC3H18-AS1 Gene

Transcripts for ZC3H18-AS1 Gene

mRNA/cDNA for ZC3H18-AS1 Gene

(1) REFSEQ mRNAs :
(5) Selected AceView cDNA sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZC3H18-AS1 Gene

No ASD Table

Relevant External Links for ZC3H18-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZC3H18-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ZC3H18-AS1 Gene

mRNA expression in normal human tissues for ZC3H18-AS1 Gene

Protein differential expression in normal tissues from HIPED for ZC3H18-AS1 Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ZC3H18-AS1 Gene

Protein tissue co-expression partners for ZC3H18-AS1 Gene

genes like me logo Genes that share expression patterns with ZC3H18-AS1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ZC3H18-AS1 Gene

Orthologs for ZC3H18-AS1 Gene

No data available for Orthologs and Evolution for ZC3H18-AS1 Gene

Paralogs for ZC3H18-AS1 Gene

No data available for Paralogs for ZC3H18-AS1 Gene

Variants for ZC3H18-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZC3H18-AS1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs11076667 -- 88,555,465(+) GCGCA(C/T)ACCAC intron-variant
rs11076668 -- 88,556,477(+) CCCCC(C/G)ACTTT intron-variant
rs11076669 -- 88,556,500(+) CCTGC(C/T)GCCAT intron-variant
rs11076675 -- 88,566,428(+) TTCCC(C/T)AGAAA intron-variant
rs11076676 -- 88,568,534(+) CGATC(C/T)GCCCG upstream-variant-2KB

Relevant External Links for ZC3H18-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZC3H18-AS1 Gene

Disorders for ZC3H18-AS1 Gene

Relevant External Links for ZC3H18-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for ZC3H18-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZC3H18-AS1 Gene

Publications for ZC3H18-AS1 Gene

No publications were found for ZC3H18-AS1 Gene.

Products for ZC3H18-AS1 Gene

Sources for ZC3H18-AS1 Gene

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