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Aliases & Descriptions for ZC3H15
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| DFRP1 3 | | HT010 2 | | LEREPO4 1, 2, 3 | | MSTP012 2 |
| | | Descriptions |
|---|
| DRG family-regulatory protein 1 3 | Likely ortholog of mouse immediate early response erythropoietin 4 3 | | erythropoietin 4 immediate early response 2 | | zinc finger CCCH-type containing 15 2 |
|
| | Search outside databases for aliases for ZC3H15 gene |
Summaries for ZC3H15(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: ZC3HF_HUMAN, Q8WU90Function: Protects DRG1 from proteolytic degradation (By similarity) |
Genomic Location for ZC3H15
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 2q32.1 Ensembl cytogenetic band: 2q32.1 HGNC cytogenetic band: 2q32.1ZC3H15 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure GeneLoc location for GC02P187060:
(about GC identifiers)
Start:
|
187,059,130 bp from pter |
End:
|
187,082,333 bp from pter |
Size:
|
23,204 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000002.10 NT_005403.16
| Proteins for ZC3H15
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ZC3HF_HUMAN, Q8WU90 (See
protein sequence)Recommended Name: Zinc finger CCCH domain-containing protein 15 Size: 426 amino acids; 48602 Da
Subunit: Interacts with DRG1
Subcellular location: Cytoplasm. Nucleus (By similarity)
Sequence caution: Sequence=AAF28981.1; Type=Frameshift; Positions=17; Sequence=AAF67649.1; Type=Frameshift; Positions=392, 407, 422; Sequence=AAL55770.1; Type=Frameshift; Positions=92; Sequence=AAQ13514.1; Type=Frameshift; Positions=404, 424;
Secondary accessions: Q5QTQ4 Q8WZ06 Q9NUZ3 Q9NZ37 Q9P079Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_060941.2
ENSEMBL proteins: ENSP00000338788
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ZC3H15: Assays for ZC3H15: | Protein
Domains/ Families for ZC3H15(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q8WU90
ProtoNet protein and cluster: Q8WU90 1 Blocks protein family: IPB000571 Zn-finger
UniProtKB/Swiss-Prot: ZC3HF_HUMAN, Q8WU90Similarity: Belongs to the ZC3H15/TMA46 familySimilarity: Contains 2 C3H1-type zinc fingers | Gene Function for ZC3H15
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_018471
Applied Biosystems Silencer® siRNAs for ZC3H15
Sigma-Aldrich siRNA for ZC3H15  Sigma-Aldrich shRNA for ZC3H15  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_018471                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_018471                                  untagged cDNA clones in CMV expression vector (see all 2): NM_018471 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_018471
UniProtKB/Swiss-Prot: ZC3HF_HUMAN, Q8WU90Function: Protects DRG1 from proteolytic degradation (By similarity)3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ZC3H15
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| --1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0019221 | cytokine-mediated signaling pathway |
IEA | -- | About this table
|
Drugs & Compounds for ZC3H15(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ZC3H15
|
Transcripts for ZC3H15(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_018471
Sigma-Aldrich siRNA for ZC3H15  Sigma-Aldrich shRNA for ZC3H15  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_018471 REFSEQ mRNAs for ZC3H15 gene: NM_018471.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_018471               OriGene GFP tagged cDNA clone in CMV expression vector: NM_018471                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_018471                                  untagged cDNA clones in CMV expression vector (see all 2): NM_018471  Additional cDNA sequence: AF109366.1 AF119892.1 AF147724.1 AF161421.1 AF220184.1 AF289586.1 AF462448.1 AK001901.1 AK297658.1 AK298615.1 AL049948.1 BC012336.1 BC021102.1 CR601058.1 CR601257.1 CR618848.1 CR622467.1 14 DOTS entries: DT.416259 DT.99986229 DT.100813839 DT.121034625 DT.91758211 DT.100813846 DT.75185742 DT.312650 DT.100813844 DT.416262 DT.95133135 DT.121034664 DT.100655472 DT.95154249 24/371 AceView cDNA sequences (see all 371
):BM843205 AI828236 BC012336 AV728145 CA312375 BP371687 BM561991 BU169907 AA550976 BE676044 AI340331 BQ776270 CR622467 BU508199 BM825257 BQ434138 BU685549 BM757597 BM911458 AI653869 BQ433362 BM556391 BU182120 BC021102
highest scoring ESTs for ZC3H15:AA054718 AA056989 AA057864 AA102512 AA205953 AA448883 AA558954 AA670250 AF147724 AF161421 Unigene Cluster for ZC3H15: Zinc finger CCCH-type containing 15 Hs.368598 [show with all ESTs]Unigene Representative Sequence: AK298615
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for ZC3H15
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for ZC3H15
1 Ensembl transcript including schematic representation: ENST00000337859
|
Expression for ZC3H15
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ZC3H15 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ZC3H15
1 / 2 / 3 5 probe-sets matching ZC3H15 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.368598
|
Orthologs for ZC3H15
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ZC3H15 gene from 5/24 species (see all 24
)
About this table Species with no ortholog for ZC3H15
ENSEMBL Gene Tree for ZC3H15 | Paralogs for ZC3H15(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for ZC3H15(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ZC3H15 (up to first 250kb)
|
Disorders & Mutations for ZC3H15
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News for ZC3H15(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ZC3H15 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10 PubMed articles for ZC3H15 gene: |
Search for ZC3H15
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ZC3H15
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ZC3H15
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZC3H15(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ZC3H15(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ZC3H15:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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