Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ZBTB9 Gene

Aliases for ZBTB9 Gene

  • Zinc Finger And BTB Domain Containing 9 2 3
  • Zinc Finger And BTB Domain-Containing Protein 9 3
  • ZNF919 3

External Ids for ZBTB9 Gene

Summaries for ZBTB9 Gene

GeneCards Summary for ZBTB9 Gene

ZBTB9 (Zinc Finger And BTB Domain Containing 9) is a Protein Coding gene. An important paralog of this gene is NACC2.

UniProtKB/Swiss-Prot for ZBTB9 Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB9 Gene

Genomics for ZBTB9 Gene

Genomic Location for ZBTB9 Gene

Start:
33,453,970 bp from pter
End:
33,457,548 bp from pter
Size:
3,579 bases
Orientation:
Plus strand

Genomic View for ZBTB9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZBTB9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB9 Gene

Regulatory Elements for ZBTB9 Gene

Proteins for ZBTB9 Gene

  • Protein details for ZBTB9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96C00-ZBTB9_HUMAN
    Recommended name:
    Zinc finger and BTB domain-containing protein 9
    Protein Accession:
    Q96C00
    Secondary Accessions:
    • A2AB19

    Protein attributes for ZBTB9 Gene

    Size:
    473 amino acids
    Molecular mass:
    50602 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZBTB9 Gene

Proteomics data for ZBTB9 Gene at MOPED

Post-translational modifications for ZBTB9 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZBTB9 Gene

No data available for DME Specific Peptides for ZBTB9 Gene

Domains for ZBTB9 Gene

Gene Families for ZBTB9 Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type
  • BTBD :BTB/POZ domain containing

Protein Domains for ZBTB9 Gene

UniProtKB/Swiss-Prot:

ZBTB9_HUMAN
Domain:
  • Contains 1 BTB (POZ) domain.:
    • Q96C00
Similarity:
  • Contains 2 C2H2-type zinc fingers.:
    • Q96C00
genes like me logo Genes that share domains with ZBTB9: view

Function for ZBTB9 Gene

Molecular function for ZBTB9 Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZBTB9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0005515 protein binding IPI 25416956
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZBTB9: view

miRNA for ZBTB9 Gene

miRTarBase miRNAs that target ZBTB9

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for ZBTB9 Gene

Localization for ZBTB9 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZBTB9 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZBTB9 Gene COMPARTMENTS Subcellular localization image for ZBTB9 gene
Compartment Confidence
mitochondrion 4
nucleus 4
cytosol 1

Gene Ontology (GO) - Cellular Components for ZBTB9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZBTB9: view

Pathways for ZBTB9 Gene

SuperPathways for ZBTB9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ZBTB9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZBTB9: view

No data available for Pathways by source for ZBTB9 Gene

Transcripts for ZBTB9 Gene

mRNA/cDNA for ZBTB9 Gene

Unigene Clusters for ZBTB9 Gene

Zinc finger and BTB domain containing 9:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB9 Gene

No ASD Table

Relevant External Links for ZBTB9 Gene

GeneLoc Exon Structure for
ZBTB9
ECgene alternative splicing isoforms for
ZBTB9

Expression for ZBTB9 Gene

mRNA expression in normal human tissues for ZBTB9 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for ZBTB9 Gene

SOURCE GeneReport for Unigene cluster for ZBTB9 Gene Hs.591805

genes like me logo Genes that share expressions with ZBTB9: view

Orthologs for ZBTB9 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZBTB9 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZBTB9 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZBTB9 36
  • 86.3 (n)
  • 88.48 (a)
ZBTB9 37
  • 88 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ZBTB9 36
  • 85.82 (n)
  • 86.84 (a)
mouse
(Mus musculus)
Mammalia Zbtb9 36
  • 82.68 (n)
  • 79.26 (a)
Zbtb9 16
Zbtb9 37
  • 78 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZBTB9 37
  • 73 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zbtb9 36
  • 81.22 (n)
  • 77.85 (a)
lizard
(Anolis carolinensis)
Reptilia ZBTB9 37
  • 51 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.12662 36
tropical clawed frog
(Silurana tropicalis)
Amphibia zbtb9 36
  • 58.08 (n)
  • 54.25 (a)
Species with no ortholog for ZBTB9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZBTB9 Gene

ENSEMBL:
Gene Tree for ZBTB9 (if available)
TreeFam:
Gene Tree for ZBTB9 (if available)

Paralogs for ZBTB9 Gene

genes like me logo Genes that share paralogs with ZBTB9: view

Variants for ZBTB9 Gene

Sequence variations from dbSNP and Humsavar for ZBTB9 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type MAF
rs2274730 -- 33,454,768(-) GCCCA(C/G)AACAG utr-variant-5-prime
rs2772385 -- 33,454,373(+) CTCTC(G/T)GTCCT upstream-variant-2KB
rs3119025 -- 33,455,199(+) TCGTC(G/T)CTGCT synonymous-codon, reference
rs3827803 -- 33,456,372(+) AAGCA(C/T)CATCT reference, synonymous-codon
rs9380354 -- 33,455,502(+) CAGTG(C/T)TCAGA reference, synonymous-codon

Structural Variations from Database of Genomic Variants (DGV) for ZBTB9 Gene

Variant ID Type Subtype PubMed ID
nsv830637 CNV Loss 17160897

Relevant External Links for ZBTB9 Gene

HapMap Linkage Disequilibrium report
ZBTB9

Disorders for ZBTB9 Gene

Relevant External Links for ZBTB9

Genetic Association Database (GAD)
ZBTB9
Human Genome Epidemiology (HuGE) Navigator
ZBTB9
genes like me logo Genes that share disorders with ZBTB9: view

No data available for UniProtKB/Swiss-Prot for ZBTB9 Gene

Publications for ZBTB9 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Genome-wide association study of smoking behaviours in patients with COPD. (PMID: 21685187) Siedlinski M. … . (Thorax 2011) 3 49
  5. High-density SNP screening of the major histocompatibility complex in systemic lupus erythematosus demonstrates strong evidence for independent susceptibility regions. (PMID: 19851445) Barcellos L.F. … Criswell L.A. (PLoS Genet. 2009) 3 49

Products for ZBTB9 Gene

Sources for ZBTB9 Gene

Back to Top

Content