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Aliases for ZBTB8B Gene

Aliases for ZBTB8B Gene

  • Zinc Finger And BTB Domain Containing 8B 2 3
  • Putative Zinc Finger And BTB Domain-Containing Protein 8B 3
  • Zinc Finger And BTB Domain-Containing Protein 8B 3
  • ZNF916B 3

External Ids for ZBTB8B Gene

Summaries for ZBTB8B Gene

GeneCards Summary for ZBTB8B Gene

ZBTB8B (Zinc Finger And BTB Domain Containing 8B) is a Protein Coding gene. An important paralog of this gene is ENSG00000254553.

UniProtKB/Swiss-Prot for ZBTB8B Gene

  • May be involved in transcriptional regulation

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB8B Gene

Genomics for ZBTB8B Gene

Genomic Location for ZBTB8B Gene

Start:
32,465,057 bp from pter
End:
32,496,686 bp from pter
Size:
31,630 bases
Orientation:
Plus strand

Genomic View for ZBTB8B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZBTB8B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB8B Gene

Regulatory Elements for ZBTB8B Gene

Proteins for ZBTB8B Gene

  • Protein details for ZBTB8B Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NAP8-ZBT8B_HUMAN
    Recommended name:
    Zinc finger and BTB domain-containing protein 8B
    Protein Accession:
    Q8NAP8
    Secondary Accessions:
    • Q15DG5
    • Q5VXR5
    • Q69YT7

    Protein attributes for ZBTB8B Gene

    Size:
    495 amino acids
    Molecular mass:
    54175 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for ZBTB8B Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZBTB8B Gene

Proteomics data for ZBTB8B Gene at MOPED

Post-translational modifications for ZBTB8B Gene

No Post-translational modifications

Other Protein References for ZBTB8B Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ZBTB8B Gene

Domains for ZBTB8B Gene

Gene Families for ZBTB8B Gene

HGNC:
  • ZNF :Zinc fingers, C2H2-type
  • BTBD :BTB/POZ domain containing

Protein Domains for ZBTB8B Gene

UniProtKB/Swiss-Prot:

ZBT8B_HUMAN
Domain:
  • Contains 1 BTB (POZ) domain.:
    • Q8NAP8
Similarity:
  • Contains 2 C2H2-type zinc fingers.:
    • Q8NAP8
genes like me logo Genes that share domains with ZBTB8B: view

Function for ZBTB8B Gene

Molecular function for ZBTB8B Gene

UniProtKB/Swiss-Prot Function: May be involved in transcriptional regulation

Gene Ontology (GO) - Molecular Function for ZBTB8B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0005515 protein binding --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZBTB8B: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZBTB8B Gene

Localization for ZBTB8B Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZBTB8B Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZBTB8B Gene COMPARTMENTS Subcellular localization image for ZBTB8B gene
Compartment Confidence
nucleus 3
cytosol 1
endoplasmic reticulum 1
golgi apparatus 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for ZBTB8B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with ZBTB8B: view

Pathways for ZBTB8B Gene

SuperPathways for ZBTB8B Gene

No Data Available

Interacting Proteins for ZBTB8B Gene

Selected Interacting proteins: Q8NAP8-ZBT8B_HUMAN for ZBTB8B Gene via I2D

Symbol External ID(s) Details
SMURF1
--
  • Q8NDD8 21
--
  • Q547Q3 21

Gene Ontology (GO) - Biological Process for ZBTB8B Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with ZBTB8B: view

No data available for Pathways by source for ZBTB8B Gene

Transcripts for ZBTB8B Gene

mRNA/cDNA for ZBTB8B Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZBTB8B Gene

Zinc finger and BTB domain containing 8B:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB8B Gene

No ASD Table

Relevant External Links for ZBTB8B Gene

GeneLoc Exon Structure for
ZBTB8B
ECgene alternative splicing isoforms for
ZBTB8B

Expression for ZBTB8B Gene

mRNA expression in normal human tissues for ZBTB8B Gene

mRNA expression in normal human tissues for ZBTB8B Gene

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for ZBTB8B Gene

SOURCE GeneReport for Unigene cluster for ZBTB8B Gene Hs.647658

genes like me logo Genes that share expressions with ZBTB8B: view

Orthologs for ZBTB8B Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZBTB8B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 37
  • 100 (a)
OneToMany
ZBTB8B 36
  • 99.53 (n)
  • 99.6 (a)
cow
(Bos Taurus)
Mammalia -- 37
  • 82 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 37
  • 89 (a)
OneToMany
ZBTB8B 36
  • 88.17 (n)
  • 89.25 (a)
mouse
(Mus musculus)
Mammalia Zbtb8b 36
  • 81.54 (n)
  • 84.5 (a)
Zbtb8b 16
Zbtb8b 37
  • 85 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 37
  • 77 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 75 (a)
OneToMany
rat
(Rattus norvegicus)
Mammalia Zbtb8b 36
  • 82.3 (n)
  • 85.48 (a)
chicken
(Gallus gallus)
Aves ZBTB8B 36
  • 75.19 (n)
  • 76.68 (a)
ZBTB8B 37
  • 73 (a)
OneToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia zbtb8b 36
  • 64.97 (n)
  • 63.06 (a)
zebrafish
(Danio rerio)
Actinopterygii zbtb8b 37
  • 48 (a)
OneToMany
Species with no ortholog for ZBTB8B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZBTB8B Gene

ENSEMBL:
Gene Tree for ZBTB8B (if available)
TreeFam:
Gene Tree for ZBTB8B (if available)

Paralogs for ZBTB8B Gene

Selected SIMAP similar genes for ZBTB8B Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZBTB8B: view

Variants for ZBTB8B Gene

Sequence variations from dbSNP and Humsavar for ZBTB8B Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs1112588 -- 32,464,185(+) CATGA(A/G)GATGG upstream-variant-2KB
rs1338383 -- 32,485,961(-) AATTG(G/T)TCTAG utr-variant-3-prime
rs1809789 -- 32,483,279(-) cctgg(C/G)taaat intron-variant
rs1809790 -- 32,483,275(-) ggtaa(A/T)ttttt intron-variant
rs1890343 -- 32,474,742(-) CAAAG(A/G)CATGG intron-variant

Relevant External Links for ZBTB8B Gene

HapMap Linkage Disequilibrium report
ZBTB8B

No data available for Structural Variations from Database of Genomic Variants (DGV) for ZBTB8B Gene

Disorders for ZBTB8B Gene

No disorders were found for ZBTB8B Gene.

No data available for UniProtKB/Swiss-Prot for ZBTB8B Gene

Publications for ZBTB8B Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. High-throughput mapping of a dynamic signaling network in mammalian cells. (PMID: 15761153) Barrios-Rodiles M. … Wrana J.L. (Science 2005) 3
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. A census of human soluble protein complexes. (PMID: 22939629) Havugimana P.C. … Emili A. (Cell 2012) 3

Products for ZBTB8B Gene

Sources for ZBTB8B Gene

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