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Aliases for ZBTB7C Gene

Aliases for ZBTB7C Gene

  • Zinc Finger And BTB Domain Containing 7C 2 3 5
  • Affected By Papillomavirus DNA Integration In ME180 Cells Protein 1 3 4
  • Zinc Finger And BTB Domain-Containing Protein 36 3 4
  • Zinc Finger And BTB Domain Containing 36 2 3
  • Zinc Finger Protein 857C 3 4
  • ZNF857C 3 4
  • ZBTB36 3 4
  • APM-1 3 4
  • APM1 3 4
  • Zinc Finger And BTB Domain-Containing 7C 3
  • B230208J24Rik 3

External Ids for ZBTB7C Gene

Previous HGNC Symbols for ZBTB7C Gene

  • ZBTB36

Previous GeneCards Identifiers for ZBTB7C Gene

  • GC00U921557
  • GC18U900235
  • GC18M043811
  • GC18M045553
  • GC18M042403

Summaries for ZBTB7C Gene

GeneCards Summary for ZBTB7C Gene

ZBTB7C (Zinc Finger And BTB Domain Containing 7C) is a Protein Coding gene. Among its related pathways are AMPK Enzyme Complex Pathway. GO annotations related to this gene include nucleic acid binding. An important paralog of this gene is ZBTB7B.

UniProtKB/Swiss-Prot for ZBTB7C Gene

  • May be a tumor suppressor gene.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB7C Gene

Genomics for ZBTB7C Gene

Regulatory Elements for ZBTB7C Gene

Promoters for ZBTB7C Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ZBTB7C on UCSC Golden Path with GeneCards custom track

Transcription factor binding sites by QIAGEN in the ZBTB7C gene promoter:

Genomic Location for ZBTB7C Gene

Chromosome:
18
Start:
48,026,673 bp from pter
End:
48,410,752 bp from pter
Size:
384,080 bases
Orientation:
Minus strand

Genomic View for ZBTB7C Gene

Genes around ZBTB7C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZBTB7C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZBTB7C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB7C Gene

Proteins for ZBTB7C Gene

  • Protein details for ZBTB7C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A1YPR0-ZBT7C_HUMAN
    Recommended name:
    Zinc finger and BTB domain-containing protein 7C
    Protein Accession:
    A1YPR0
    Secondary Accessions:
    • O73453

    Protein attributes for ZBTB7C Gene

    Size:
    619 amino acids
    Molecular mass:
    69017 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ZBTB7C Gene

Proteomics data for ZBTB7C Gene at MOPED

Post-translational modifications for ZBTB7C Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Antibody Products

No data available for DME Specific Peptides for ZBTB7C Gene

Domains & Families for ZBTB7C Gene

Gene Families for ZBTB7C Gene

Protein Domains for ZBTB7C Gene

Graphical View of Domain Structure for InterPro Entry

A1YPR0

UniProtKB/Swiss-Prot:

ZBT7C_HUMAN :
  • Contains 1 BTB (POZ) domain.
  • Contains 4 C2H2-type zinc fingers.
Domain:
  • Contains 1 BTB (POZ) domain.
Similarity:
  • Contains 4 C2H2-type zinc fingers.
genes like me logo Genes that share domains with ZBTB7C: view

Function for ZBTB7C Gene

Molecular function for ZBTB7C Gene

UniProtKB/Swiss-Prot Function:
May be a tumor suppressor gene.

Gene Ontology (GO) - Molecular Function for ZBTB7C Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding IEA --
genes like me logo Genes that share ontologies with ZBTB7C: view

Phenotypes for ZBTB7C Gene

MGI mutant phenotypes for ZBTB7C:
inferred from 1 alleles
GenomeRNAi human phenotypes for ZBTB7C:
genes like me logo Genes that share phenotypes with ZBTB7C: view

Animal Models for ZBTB7C Gene

MGI Knock Outs for ZBTB7C:

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for ZBTB7C Gene

Localization for ZBTB7C Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ZBTB7C Gene COMPARTMENTS Subcellular localization image for ZBTB7C gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ZBTB7C Gene

Pathways & Interactions for ZBTB7C Gene

SuperPathways for ZBTB7C Gene

Superpath Contained pathways
1 AMPK Enzyme Complex Pathway
genes like me logo Genes that share pathways with ZBTB7C: view

Pathways by source for ZBTB7C Gene

1 Qiagen pathway for ZBTB7C Gene

Interacting Proteins for ZBTB7C Gene

Selected Interacting proteins: A1YPR0-ZBT7C_HUMAN for ZBTB7C Gene via MINT

Gene Ontology (GO) - Biological Process for ZBTB7C Gene

None

No data available for SIGNOR curated interactions for ZBTB7C Gene

Drugs & Compounds for ZBTB7C Gene

No Compound Related Data Available

Transcripts for ZBTB7C Gene

mRNA/cDNA for ZBTB7C Gene

(15) REFSEQ mRNAs :
(7) Additional mRNA sequences :
(1) Selected AceView cDNA sequences:
(28) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZBTB7C Gene

Zinc finger and BTB domain containing 7C:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB7C Gene

No ASD Table

Relevant External Links for ZBTB7C Gene

GeneLoc Exon Structure for
ZBTB7C
ECgene alternative splicing isoforms for
ZBTB7C

Expression for ZBTB7C Gene

mRNA expression in normal human tissues for ZBTB7C Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ZBTB7C Gene

This gene is overexpressed in Esophagus - Mucosa (x7.5) and Skin - Sun Exposed (Lower leg) (x4.2).

Protein differential expression in normal tissues from HIPED for ZBTB7C Gene

This gene is overexpressed in Plasma (68.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for ZBTB7C Gene



SOURCE GeneReport for Unigene cluster for ZBTB7C Gene Hs.515388

mRNA Expression by UniProt/SwissProt for ZBTB7C Gene

A1YPR0-ZBT7C_HUMAN
Tissue specificity: Detected in normal cervical keratinocytes, and in some cervical carcinoma cell lines.
genes like me logo Genes that share expression patterns with ZBTB7C: view

Protein tissue co-expression partners for ZBTB7C Gene

- Elite partner

Primer Products

In Situ Assay Products

Orthologs for ZBTB7C Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZBTB7C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZBTB7C 35
  • 99.46 (n)
  • 99.84 (a)
ZBTB7C 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ZBTB7C 36
  • 98 (a)
OneToOne
ZBTB7C 35
  • 93.15 (n)
  • 97.88 (a)
dog
(Canis familiaris)
Mammalia ZBTB7C 35
  • 91.48 (n)
  • 95.47 (a)
-- 36
  • 86 (a)
OneToMany
ZBTB7C 36
  • 95 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Zbtb7c 16
Zbtb7c 35
  • 89.82 (n)
  • 94.18 (a)
Zbtb7c 36
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ZBTB7C 36
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZBTB7C 36
  • 83 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Zbtb7c 35
  • 89.45 (n)
  • 94.51 (a)
chicken
(Gallus gallus)
Aves ZBTB7C 35
  • 77.74 (n)
  • 79.53 (a)
ZBTB7C 36
  • 80 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ZBTB7C 36
  • 74 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia zbtb7c 35
  • 71.57 (n)
  • 70.57 (a)
zebrafish
(Danio rerio)
Actinopterygii FP085391.3 36
  • 53 (a)
OneToOne
LOC100537080 35
  • 63.09 (n)
  • 59.86 (a)
Species with no ortholog for ZBTB7C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZBTB7C Gene

ENSEMBL:
Gene Tree for ZBTB7C (if available)
TreeFam:
Gene Tree for ZBTB7C (if available)

Paralogs for ZBTB7C Gene

Paralogs for ZBTB7C Gene

genes like me logo Genes that share paralogs with ZBTB7C: view

Variants for ZBTB7C Gene

Sequence variations from dbSNP and Humsavar for ZBTB7C Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1298950 -- 48,357,745(-) TCTCA(A/G)GCCAC intron-variant
rs868306 -- 48,295,169(+) AGTAA(C/T)GTCTT intron-variant
rs1004812 -- 48,400,797(-) agttt(C/T)ctagc intron-variant
rs871082 -- 48,333,904(+) GAATT(C/T)CCATT intron-variant
rs875610 -- 48,333,297(-) TATCT(G/T)TATTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZBTB7C Gene

Variant ID Type Subtype PubMed ID
nsv909616 CNV Gain 21882294
esv274948 CNV Loss 21479260
nsv2289 CNV Insertion 18451855
esv1002707 CNV Deletion 20482838
esv2313973 CNV Deletion 18987734

Variation tolerance for ZBTB7C Gene

Residual Variation Intolerance Score: 66.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.72; 73.21% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZBTB7C Gene

HapMap Linkage Disequilibrium report
ZBTB7C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZBTB7C Gene

Disorders for ZBTB7C Gene

Relevant External Links for ZBTB7C

Genetic Association Database (GAD)
ZBTB7C
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZBTB7C

No disorders were found for ZBTB7C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZBTB7C Gene

Publications for ZBTB7C Gene

  1. APM-1, a novel human gene, identified by aberrant co-transcription with papillomavirus oncogenes in a cervical carcinoma cell line, encodes a BTB/POZ-zinc finger protein with growth inhibitory activity. (PMID: 9427755) Reuter S. … Schwarz E. (EMBO J. 1998) 3 4 67
  2. Genome-wide association study in Han Chinese identifies three novel loci for human height. (PMID: 23456168) Hao Y. … Gu D. (Hum. Genet. 2013) 3
  3. Genetic association with overall survival of taxane-treated lung cancer patients - a genome-wide association study in human lymphoblastoid cell lines followed by a clinical association study. (PMID: 23006423) Niu N. … Wang L. (BMC Cancer 2012) 3
  4. Kr-pok increases FASN expression by modulating the DNA binding of SREBP-1c and Sp1 at the proximal promoter. (PMID: 22331133) Jeon B.N. … Hur M.W. (J. Lipid Res. 2012) 3
  5. KR-POK interacts with p53 and represses its ability to activate transcription of p21WAF1/CDKN1A. (PMID: 22253232) Jeon B.N. … Hur M.W. (Cancer Res. 2012) 3

Products for ZBTB7C Gene

Sources for ZBTB7C Gene

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