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Aliases & Descriptions for ZBTB43
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases FLJ22470 1 KIAA0414 1 , 3 OTTHUMP00000022155 2 OTTHUMP00000022157 2 ZBTB22B 1 , 2 , 3 ZNF-X 1 , 2 ZNF297B 2 , 3 ZnF-x 3
Descriptions Zinc finger and BTB domain-containing protein 22B 3 Zinc finger protein 297B 1 , 2 , 3 zinc finger and BTB domain containing 43 2
Search outside databases for aliases for ZBTB43 gene
Summaries for ZBTB43 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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UniProtKB/Swiss-Prot: ZBT43_HUMAN, O43298 Function : May be involved in transcriptional regulation
Genomic Location for ZBTB43
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ZBTB43 gene Entrez Gene cytogenetic band: 9q33-q34 Ensembl cytogenetic band: 9q33.3 HGNC cytogenetic band: 9p24.1-q22.33 ZBTB43 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 9 GeneLoc Exon Structure
GeneLoc location for GC09P128607:
(about GC identifiers )
Start:
128,607,126 bp from pter
End:
128,639,203 bp from pter
Size:
32,078 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000009.10 NT_008470.18 Proteins for ZBTB43
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ZBT43_HUMAN, O43298 (See
protein sequence )Recommended Name: Zinc finger and BTB domain-containing protein 43 Size : 467 amino acids; 52630 Da
Subunit : Interacts with BDP1
Subcellular location : Nucleus (Probable)
PDB structures from and Proteopedia : 2CSH (3D)
 
REFSEQ proteins (2 alternative transcripts):
NP_001129248.1 NP_054726.1 ENSEMBL proteins: ENSP00000362563 ENSP00000362556 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 2 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ZBTB43: Assays for ZBTB43:
Protein
Domains/ Families for ZBTB43(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O43298 ProtoNet protein and cluster: O43298
2 Blocks protein families : IPB000210 BTB/POZ domain IPB007086 C2H2-type zinc finger signature UniProtKB/Swiss-Prot: ZBT43_HUMAN, O43298 Similarity : Belongs to the krueppel C2H2-type zinc-finger protein familySimilarity : Contains 1 BTB (POZ) domainSimilarity : Contains 3 C2H2-type zinc fingers
Gene Function for ZBTB43
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001135776 Applied Biosystems Silencer ® siRNAs for ZBTB43 Sigma-Aldrich siRNA and siRNA Panels for ZBTB43 Sigma-Aldrich shRNA for ZBTB43 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_014007 UniProtKB/Swiss-Prot: ZBT43_HUMAN, O43298 Function : May be involved in transcriptional regulation
4 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ZBTB43
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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1 Interacting protein for ZBTB43 (ENSP00000362556 3 ) via UniProtKB, MINT, and/or STRING About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0006350 transcription
IEA -- GO:0006355 regulation of transcription, DNA-dependent
IEA --
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Drugs & Compounds for ZBTB43 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ZBTB43
Transcripts for ZBTB43(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001135776 Sigma-Aldrich siRNA and siRNA Panels for ZBTB43 Sigma-Aldrich shRNA for ZBTB43 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001135776 NM_014007
REFSEQ mRNAs for ZBTB43 gene (2 alternative transcripts): NM_001135776.1 NM_014007.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001135776 NM_014007
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001135776  
Additional cDNA sequence: BT007194.1
8 DOTS entries : DT.100836684 DT.87000319 DT.92427677 DT.95162953 DT.121158459 DT.97861380 DT.100774842 DT.91745601
24/167 AceView cDNA sequences (see all 167
):T92685 BM838233 BP335448 BQ773935 BF432986 BF433622 AI684662 CF265007 AI263405 AA630231 BP353178 BX324302 BE503618 AA405809 AI129167 BF590733 AI467863 AI680916 BE219056 BQ016945 BM724980 AL599920 BF446503 BE503194
highest scoring ESTs for ZBTB43 :AA362694 AA465708 AA557630 AA602493 AA702698 AA749109 AA782743 AA813602 AA814473 AA829825
Unigene Clusters for ZBTB43: Zinc finger and BTB domain containing 43 Hs.355581 [show with all ESTs ] , Hs.718657 [show with all ESTs ] Unigene Representative Sequences: NM_014007 , BT007194 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB43 ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d SP1 :     -   -     -           SP2 :           -           SP3 :           -           SP4 :                     SP5 :         -   -          
About this scheme ECgene alternative splicing isoforms for ZBTB43 2 Ensembl transcripts including schematic representations : ENST00000373464
ENST00000373457
Expression for ZBTB43
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ZBTB43 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ZBTB43 1 / 2 / 3
10 probe-sets matching ZBTB43 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TGACTTCTTGSOURCE GeneReport for Unigene clusters: Hs.355581 Hs.718657
Orthologs for ZBTB43
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ZBTB43 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for ZBTB43 ENSEMBL Gene Tree for ZBTB43 Paralogs for ZBTB43 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ZBTB43 gene ZBTB34 2 ZBTB22 2 ZBTB9 2 ZBTB37 2
SNPs/Variants for ZBTB43 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ZBTB43 (up to first 250kb)
Disorders & Mutations for ZBTB43
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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--
Medical News for ZBTB43 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ZBTB43 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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6 PubMed articles for ZBTB43 gene :
Search for ZBTB43
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing ZBTB43
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ZBTB43
(According to HUGE )
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Specialized Databases showing ZBTB43 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ZBTB43 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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