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ZBTB2 Gene

protein-coding GIFtS: 47

GC06M151726

zinc finger and BTB domain containing 2
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc , and/or ⁷Ensembl, ⁸miRBase)
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Aliases
KIAA1483 ^¹, ³
OTTHUMP00000017428 ^²
ZNF437 ^¹, ², ³
bA351K16.2 ^¹

Descriptions
zinc finger and BTB domain containing 2 ^²

External Ids
HGNC: 20868¹
Entrez Gene: 57621²
UniProtKB: Q8N680³
Ensembl: ENSG00000181472⁷

Search outside databases for aliases for ZBTB2 gene

Previous GC identifers: GC06M151640 GC06M151716 GC06M151777

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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UniProtKB/Swiss-Prot: ZBTB2_HUMAN, Q8N680

Function: May be involved in transcriptional regulation

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
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Genomic View:

UCSC Golden Path with GeneCards custom track

Transcription factor binding sites upstream to the ZBTB2 gene

Entrez Gene cytogenetic band: 6q25.1 Ensembl cytogenetic band: 6q25.1 HGNC cytogenetic band: 6q25.1

ZBTB2 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure

GeneLoc location for GC06M151726: (about GC identifiers)

Start:	151,726,943 bp from pter
End:	151,754,370 bp from pter
Size:	27,428 bases
Orientation:	minus strand

RefSeq DNA sequence:

NC_000006.10 NT_025741.14

(According to ¹UniProtKB, and/or Ensembl, Phosphorylation sites according to ²Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
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UniProtKB/Swiss-Prot: ZBTB2_HUMAN, Q8N680 (See protein sequence)

Recommended Name: Zinc finger and BTB domain-containing protein 2

Size: 514 amino acids; 57337 Da

Subcellular location: Nucleus (Potential)

Secondary accessions: Q5SZ81 Q9P245

Post-translational modifications:

Phosphorylated upon DNA damage, probably by ATM or ATR¹

View phosphorylation sites using PhosphoSite²

REFSEQ proteins: NP_065912.1

ENSEMBL proteins:

ENSP00000323183

Human Recombinant Proteins

	Browse Drug Discovery Central at Invitrogen for human recombinant proteins
	Browse Purified and Recombinant Proteins at Millipore
	Browse Human Recombinant Proteins at Sigma-Aldrich
	Browse R&D Systems for human recombinant proteins
	Browse recombinant and purified proteins available from Enzo Life Sciences
	Recombinant Proteins from Abcam (ZBTB2)
	Browse Abnova for Human Recombinant Proteins

Browse Origene for full length recombinant human proteins expressed in human HEK293 cells

2 Gene Ontology (GO) cellular component terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005622	intracellular	IEA	--
GO:0005634	nucleus	IEA	--

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Antibodies for ZBTB2:

	Browse Antibodies Central at Invitrogen
	Browse Millipore's Extensive Line of Mono- and Polyclonal Antibodies
	Sigma-Aldrich Antibodies for ZBTB2
	Browse R&D Systems for Antibodies
	Antibodies from Abcam (ZBTB2), each with their Abpromise^SM
	Browse Abnova for Monoclonal and Polyclonal Antibodies
	Search Novus for antibodies for ZBTB2

Assays for ZBTB2:

	Browse Invitrogen for biochemical assays
	Browse Kits and Assays available from Millipore
	Browse R&D Systems for biochemical assays
	Browse biochemical assays available from Enzo Life Sciences

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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Graphical View of Domain Structure for InterPro Entry Q8N680

ProtoNet protein and cluster: Q8N680

1 Blocks protein family: IPB000210 BTB/POZ domain

UniProtKB/Swiss-Prot: ZBTB2_HUMAN, Q8N680

Similarity: Contains 1 BTB (POZ) domain

Similarity: Contains 4 C2H2-type zinc fingers

(According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (ZBTB2)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (ZBTB2)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_020861

Applied Biosystems Silencer® siRNAs for ZBTB2

Sigma-Aldrich siRNA and siRNA Panels for ZBTB2

Sigma-Aldrich shRNA for ZBTB2

Explore Sigma-Aldrich super-pooled esiRNAs

Clones:		Browse Clone Ranger at Invitrogen for clones
		Browse Clones for the Expression of Recombinant Proteins Available from Millipore

OriGene GFP tagged cDNA clone in CMV expression vector: NM_020861
Myc/DDK tagged cDNA clone in CMV expression vector: NM_020861
untagged cDNA clone in CMV expression vector: NM_020861

Primers:

Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers

OriGene genome-wide validated SYBR primer pairs: NM_020861

UniProtKB/Swiss-Prot: ZBTB2_HUMAN, Q8N680

Function: May be involved in transcriptional regulation

4 Gene Ontology (GO) molecular function terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0003677	DNA binding	IEA	--
GO:0005515	protein binding	IEA	--
GO:0008270	zinc ion binding	IEA	--
GO:0046872	metal ion binding	IEA	--

About this table

(Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to ¹UniProtKB, ²MINT, and/or ³STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
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2 Gene Ontology (GO) biological process terms (links to tree view):

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0006350	transcription	IEA	--
GO:0006355	regulation of transcription, DNA-dependent	IEA	--

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(Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
About This Section

Browse drugs & compounds from Enzo Life Sciences

Browse Small Molecules at Sigma-Aldrich

Browse Tocris compounds for ZBTB2

(GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView,
non coding RNAs according to RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from Invitrogen, Millipore, and/or Abnova,
siRNAs from Applied Biosystems, Sigma-Aldrich,
shRNA from Sigma-Aldrich, OriGene,
Tagged/untagged cDNA clones from OriGene,
Expression Assays from Applied Biosystems)
About This Section

Inhib. RNA:		Invitrogen RNAi Products for gene knock-down (ZBTB2)
		Browse for Gene Knock-down Tools from Millipore
		Abnova Chimera RNAi Products for Gene knock-down (ZBTB2)

OriGene 29mer shRNA kit in GFP-retroviral vector: NM_020861

Sigma-Aldrich siRNA and siRNA Panels for ZBTB2

Sigma-Aldrich shRNA for ZBTB2

Explore Sigma-Aldrich super-pooled esiRNAs

Applied Biosystems Silencer® siRNAs:

NM_020861

REFSEQ mRNAs for ZBTB2 gene:

NM_020861.1

Applied Biosystems TaqMan ® Gene Expression Assays:

NM_020861

              OriGene GFP tagged cDNA clone in CMV expression vector: NM_020861
                                 Myc/DDK tagged cDNA clone in CMV expression vector: NM_020861
                                 untagged cDNA clone in CMV expression vector: NM_020861

Additional cDNA sequence:

AB040916.1 AJ420526.1 AK092886.1 AK291942.1 AL832957.1 BC020172.1

5 DOTS entries:

DT.110934 DT.95163737 DT.100748291 DT.100736631 DT.100736632

24/68 AceView cDNA sequences (see all 68 ):

AW674826 AA446719 AW243652 AI423715 AL832957 AA994297 AI689206 BF665643

BI818997 AK092886 BQ128123 AX747790 BQ581278 BM727705 AA446591 NM_020861

BC020172 BM681132 CB047004 BM828414 BU579889 CB961287 AW673962 AI753762

highest scoring ESTs for ZBTB2:

AI910721 BC020172 BG333741 CB047005 AA187189 AA385503 AA446591 AA446719 AA541560 AA759307

Unigene Cluster for ZBTB2:

Zinc finger and BTB domain containing 2

Hs.520073 [show with all ESTs]

Unigene Representative Sequence: BC020172

GeneLoc Exon Structure

1 Ensembl transcript including schematic representation:

ENST00000325144

(Experimental results according to ¹GeneNote and GNF BioGPS,
probe sets-to-genes annotations according to ²GeneAnnot , ³GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
Expression Assays from Applied Biosystems )
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ZBTB2 expression in normal and diseased human tissues

Applied Biosystems TaqMan ® Gene Expression Assays for ZBTB2

¹ / ² / ³

4 probe-sets matching ZBTB2 gene

Affymetrix probe-set	Array	# genes	Sensitivity	Specificity	Correlation	Length	Gb_Accession	Consensus	Uniqueness	Score	Rank
Affymetrix probe-set	Array	GeneAnnot data			GeneNote data		GeneTide data
71239_at²^{, 3}	U95-E	1	1.00	1.00	0.87	0.94	AI910721	0.80	1.00	0.91	1
61339_r_at²^{, 3}	U95-C	2	1.00	0.97	0.81	1.07	AA541560	0.60	1.00	0.82	1
226284_at²^{, 3}	U133-B	1	1.00	1.00	--	--	BF111616	0.60	1.00	0.82	1
226284_at²	U133Plus2	1	1.00	1.00	--	--	--	--	--	--	--

GeneDecks ZBTB2 for binary patterns associated with the probe-sets selected above

About GeneDecksing

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Data from

(Publications) and GNF BioGPS
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About these images

CGAP SAGE TAG: TATAGTTGAG

SOURCE GeneReport for Unigene cluster: Hs.520073

(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD and/or ⁵MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
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Orthologs for ZBTB2 gene from 5/9 species (see all 9 )

Organism	Gene	Locus	Description	Human Similarity	NCBI accessions
dog (Canis familiaris)	ZBTB2¹	--	zinc finger and BTB domain containing 2	89.3(n) 97.28(a)	484036 XM_541153.2 XP_541153.2
chimpanzee (Pan troglodytes)	ZBTB2¹	--	zinc finger and BTB domain containing 2	99.42(n) 99.61(a)	472162 XM_527539.2 XP_527539.1
cow (Bos taurus)	ZBTB2¹	--	zinc finger and BTB domain containing 2	87.48(n) 96.5(a)	513775 XM_591519.3 XP_591519.2
rat (Rattus norvegicus)	Zbtb2¹	--	zinc finger and BTB domain containing 2	85.67(n) 94.75(a)	308126 XM_217825.3 XP_217825.1
mouse (Mus musculus)	Zbtb2^{1, 5}	10⁵	zinc finger and BTB domain containing 2^{1, 5}	85.6(n)¹ 94.75(a)¹	381990¹ NM_001033466.2¹ NP_001028638.1¹ AK030936⁵ AK132308⁵ (see all 14)

About this table Species with no ortholog for ZBTB2

ENSEMBL Gene Tree for ZBTB2

(Paralogs according to ¹HomoloGene
and ²Ensembl, Pseudogenes according to ³Pseudogene.org)
About This Section

Paralogs for ZBTB2 gene

ZBTB25² ZBTB1²

(According to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
About This Section

10/150 NCBI SNPs in ZBTB2 are shown (see all 150 )
(Click for Applied Biosystems TaqMan ® Genotyping Assay) (see all 58)

AB	SNP ID	Valid	Chr 6 pos	Sequence	Recs	AA Chg	Type	More	Recs	Allele freq	Pop	Total sample	More
AB	Genomic Data				Transcription Data				Allele Frequencies
				--	--	--		--	--				--
	rs3186051^1,2	A,C,F,H	151727287(-)	`AAATCT/AAATTG`	1	--	ut3¹		10		EA MN EU WA NA	1912
	rs4870016^1,2	A,C,F	151755742(+)	`GTGTAA/GCTTCA`	1	--	ng3¹		4		NA EA	362
--	rs9397400^1,2	A,C	151755030(+)	`CTTTAC/TCTTGC`	1	--	ng3¹		0	--	--	--	--
	rs11758343^1,2	H	151726961(+)	`AAACGT/GTTATT`	1	--	ut3¹ ese³		4		EU EA WA	416
--	rs3832449^1,2	C	151727222(-)	`TTTTT-/TCTTTC`	1	--	ut3¹ trp³		0	--	--	--	--
	rs12234164^1,2	H	151726534(+)	`GAAAAC/GGACTC`	1	--	ng5¹		4		EU EA WA	420
	rs11155787^1,2	A,C,F,H	151728598(+)	`CCTTCC/TTCAAA`	1	E/E	syn¹ ese³ trp³		17		EA NA EU WA	1542
	rs9479024^1,2	C,F	151736370(+)	`TATACA/GTCGCC`	1	D/D	syn¹ ese³		1		NA	78
	rs35497457^1,2	F	151728637(-)	`TACACC/AATGGT`	1	T/T	syn¹		1		NA	78
	rs3734792^1,2	H	151729540(-)	`GGAGCC/GTTTTC`	1	A/A	syn¹		4		EU EA WA	416

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HapMap Linkage Disequilibrium images for ZBTB2 (up to first 250kb)

(in which this Gene is Involved, According to OMIM, UniProtKB, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
About This Section

(Possibly Related Articles in Doctor's Guide)
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(in PubMed. Associations of this gene to articles via ¹Novoseek, ²HGNC, ³Entrez Gene, ⁴UniProtKB/Swiss-Prot, ⁵UniProtKB/TrEMBL, ⁶GAD, and/or ⁷PharmGKB)
About This Section

7 PubMed articles for ZBTB2 gene:

Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10819331)^{2, 3, 4} Nagase T....Ohara O. (2000)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{3, 4} Gerhard D.S....Malek J. (2004)
The DNA sequence and analysis of human chromosome 6. (PubMed id 14574404)^{3, 4} Mungall A.J.... Beck S. (2003)
ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage. (PubMed id 17525332)⁴ Matsuoka S.... Elledge S.J. (2007)
Proteomic analysis of steady-state nuclear hormone receptor coactivator complexes. (PubMed id 16051665)³ Jung S.Y....Qin J. (2005)
Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)³ Ota T....Sugano S. (2004)
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)³ Strausberg R.L....Marra M.A. (2002)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
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Entrez Gene: 57621	HGNC: 20868	AceView: ZBTB2	Ensembl:ENSG00000181472	euGenes: HUgn57621
ECgene: ZBTB2	H-InvDB: ZBTB2

(According to HUGE)
About This Section

HUGE: KIAA1483

(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Licensable Technologies for ZBTB2
(Available from WIS Yeda, Salk, Tufts)

About This Section

(Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section

Products for ZBTB2:

TaqMan ® Gene Expression Assays

TaqMan ® Genotyping Assays

Free SNP selection tool

Invitrogen iPath Pathways	Invitrogen BLOCK-iT™ RNAi
Invitrogen Antibodies	Invitrogen Assays
Invitrogen Clones	Invitrogen Q-PCR Products
Invitrogen Human Recombinant Kinases	Invitrogen Custom Antibody and Peptide Service
Invitrogen Proteins / Assays / Screening Services	Search Invitrogen catalog for ZBTB2-related products

	Millipore Custom Antibody & Bulk Services
	Millipore Preclinical / Clinical Development Services
	Millipore Immunoassay Services
	Millipore Target Screening & Profiling Services

	Predesigned and custom siRNAs for ZBTB2		Antibodies for ZBTB2
	Explore super-pooled esiRNAs		Browse proteins at Sigma-Aldrich
	Lentivirus-delivered shRNAs for ZBTB2		Browse small molecules at Sigma-Aldrich
	"Your Favorite Gene" Pathways		feedback

	Antibodies		Primer Pairs
	Cell Culture Products		ELISAs
	Flow Cytometry Kits		Protease Activity Assays & Reagents
	Cell Selection/Detection Kits & Reagents		ELISA/Assay Development Kits & Reagents
	Multiplex/Array Assay Kits & Reagents		ELISpot Kits & Development Modules
	Recombinant & Natural Proteins

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ZBTB2 Gene

protein-coding GIFtS: 47

Aliases &
Descriptions
for ZBTB2

Summaries
for ZBTB2

Genomic Location
for ZBTB2

Proteins
for ZBTB2

Protein Domains/
Families
for ZBTB2

Gene Function
for ZBTB2

Pathways & Interactions
for ZBTB2

Drugs & Compounds
for ZBTB2

Transcripts
for ZBTB2

Expression
for ZBTB2

Orthologs
for ZBTB2

Paralogs
for ZBTB2

SNPs/Variants
for ZBTB2

Disorders & Mutations
for ZBTB2

Medical News
for ZBTB2

Publications
for ZBTB2

Search for ZBTB2

Genome Databases showing ZBTB2

Other Databases showing ZBTB2

Specialized Databases showing ZBTB2

Licensable Technologies
for ZBTB2

Services
for ZBTB2

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

ZBTB2 Gene

protein-coding GIFtS: 47

Aliases & Descriptionsfor ZBTB2

Summariesfor ZBTB2

Genomic Locationfor ZBTB2

Proteinsfor ZBTB2

Protein Domains/Familiesfor ZBTB2

Gene Functionfor ZBTB2

Pathways & Interactionsfor ZBTB2

Drugs & Compoundsfor ZBTB2

Transcriptsfor ZBTB2

Expression for ZBTB2

Orthologsfor ZBTB2

Paralogsfor ZBTB2

SNPs/Variantsfor ZBTB2

Disorders & Mutationsfor ZBTB2

Medical Newsfor ZBTB2

Publicationsfor ZBTB2

Search for ZBTB2

Genome Databases showing ZBTB2

Other Databases showing ZBTB2

Specialized Databases showing ZBTB2

Licensable Technologiesfor ZBTB2

Servicesfor ZBTB2

Gene Index: 3 5 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

Aliases &
Descriptions
for ZBTB2

Summaries
for ZBTB2

Genomic Location
for ZBTB2

Proteins
for ZBTB2

Protein Domains/
Families
for ZBTB2

Gene Function
for ZBTB2

Pathways & Interactions
for ZBTB2

Drugs & Compounds
for ZBTB2

Transcripts
for ZBTB2

Expression
for ZBTB2

Orthologs
for ZBTB2

Paralogs
for ZBTB2

SNPs/Variants
for ZBTB2

Disorders & Mutations
for ZBTB2

Medical News
for ZBTB2

Publications
for ZBTB2

Licensable Technologies
for ZBTB2

Services
for ZBTB2