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Aliases for ZBTB17 Gene

Aliases for ZBTB17 Gene

  • Zinc Finger And BTB Domain Containing 17 2 3 5
  • Zinc Finger Protein 60 2 3 4
  • Zinc Finger Protein 151 (PHZ-67) 2 3
  • ZNF151 3 4
  • MIZ-1 3 4
  • ZNF60 3 4
  • Zinc Finger And BTB Domain-Containing Protein 17 3
  • Myc-Interacting Zinc Finger Protein 1 4
  • Myc-Interacting Zn Finger Protein-1 3
  • Zinc Finger Protein 151 4
  • PHZ-67 3
  • MIZ1 4

External Ids for ZBTB17 Gene

Previous HGNC Symbols for ZBTB17 Gene

  • ZNF151
  • ZNF60

Previous GeneCards Identifiers for ZBTB17 Gene

  • GC01M016013
  • GC01M016140
  • GC01M016268
  • GC01M014787

Summaries for ZBTB17 Gene

Entrez Gene Summary for ZBTB17 Gene

  • This gene encodes a zinc finger protein involved in the regulation of c-myc. The symbol MIZ1 has also been associated with PIAS2 which is a different gene located on chromosome 18. [provided by RefSeq, Jul 2008]

GeneCards Summary for ZBTB17 Gene

ZBTB17 (Zinc Finger And BTB Domain Containing 17) is a Protein Coding gene. Diseases associated with ZBTB17 include Split Hand-Foot Malformation 1. Among its related pathways are Small cell lung cancer and Unfolded Protein Response (UPR). GO annotations related to this gene include transcription factor activity, sequence-specific DNA binding. An important paralog of this gene is ZBTB48.

UniProtKB/Swiss-Prot for ZBTB17 Gene

  • Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation. Represses RB1 transcription; this repression can be blocked by interaction with ZBTB49 isoform 3/ZNF509S1 (PubMed:25245946).

Gene Wiki entry for ZBTB17 Gene

Additional gene information for ZBTB17 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB17 Gene

Genomics for ZBTB17 Gene

Regulatory Elements for ZBTB17 Gene

Enhancers for ZBTB17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H016902 1.9 FANTOM5 ENCODE dbSUPER 50.7 -928.9 -928918 4 ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZFP41 MEF2D SSRP1 CROCC ZBTB17 CROCCP3 ARHGEF19 RPL22P3 LINC01772 MFAP2 NECAP2 SZRD1 NBPF1
GH01H015829 2 FANTOM5 Ensembl ENCODE dbSUPER 35.1 +142.1 142132 9 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A PPARGC1A MEF2D ZBTB17 FAM231A SPEN ENSG00000237938 CROCC CLCNKA NECAP2 CD24P1 RNU1-1 FLJ37453
GH01H016348 1.8 FANTOM5 Ensembl ENCODE 28.4 -374.8 -374840 5 ARID4B SIN3A FEZF1 ZNF2 YY1 ZNF766 CBX5 ZNF143 ZNF207 FOS SPEN RPL22P3 FBXO42 ZBTB17 CROCC ENSG00000237938 ARHGEF19 MFAP2 EIF1AXP1 CROCCP3
GH01H016894 1.4 ENCODE dbSUPER 32.7 -920.1 -920054 2 HDGF PKNOX1 ARNT ZFP64 ARID4B SIN3A FEZF1 YY1 ZNF766 ZNF143 ZBTB17 ARHGEF19 CROCC NECAP2 RPL22P3 CROCCP3 FBXO42 SZRD1 LINC01772 MFAP2
GH01H016729 1.3 ENCODE dbSUPER 32.4 -751.4 -751409 0 HNRNPUL1 ARNT FEZF1 GLI4 ZNF2 ETS1 ZNF121 GTF3C2 FOS ZNF548 ENSG00000237938 SPEN RPS16P1 ARHGEF19 MFAP2 RPL22P3 CROCC CROCCP3 ZBTB17 ENSG00000224621
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZBTB17 on UCSC Golden Path with GeneCards custom track

Promoters for ZBTB17 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000001980 332 1201 HDGF PKNOX1 MLX ARNT ARID4B SIN3A ZNF2 ZBTB7B YY1 SLC30A9

Genomic Location for ZBTB17 Gene

Chromosome:
1
Start:
15,941,869 bp from pter
End:
15,976,132 bp from pter
Size:
34,264 bases
Orientation:
Minus strand

Genomic View for ZBTB17 Gene

Genes around ZBTB17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZBTB17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZBTB17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB17 Gene

Proteins for ZBTB17 Gene

  • Protein details for ZBTB17 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q13105-ZBT17_HUMAN
    Recommended name:
    Zinc finger and BTB domain-containing protein 17
    Protein Accession:
    Q13105
    Secondary Accessions:
    • A0AV07
    • B4DXB4
    • B7ZLQ9
    • F5H411
    • Q15932
    • Q5JYB2
    • Q9NUC9

    Protein attributes for ZBTB17 Gene

    Size:
    803 amino acids
    Molecular mass:
    87928 Da
    Quaternary structure:
    • Homooligomerizes (via the BTB/POZ domain), multimerization is required for DNA binding. Interacts (via the C-terminal zinc fingers) with GIF1; the interaction results in the recruitment of MYB to the CDKN1A/p21 and CDKN1B promoters and repression of transcription. Interacts with TRAF2, interfering with the binding of UBC13 to TRAF2, and inhibiting TRAF2 E3 ligase activity. Interacts with MYC (via the C-terminal helix-loop-helix motif); the interaction inhibits ZBTB17 transactivation and growth arrest activities and renders it insoluble in the nucleus. Also interacts with HCFC1, MAGEA4 and TMPRSS11A. Interacts with BCL6; the interaction inhibits ZBTB17 transactivation activity on target genes involved in cell cycle arrest. Interacts with ZBTB49 isoform 3/ZNF509S1; this interaction blocks ZBTB17-mediated repression of RB1 (PubMed:25245946).

    Three dimensional structures from OCA and Proteopedia for ZBTB17 Gene

    Alternative splice isoforms for ZBTB17 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for ZBTB17 Gene

Post-translational modifications for ZBTB17 Gene

  • Undergoes Lys-48-linked polyubiquitination at Lys-397 and Lys-481 and subsequent proteasomal degradation in a TRAF2-dependent manner.
  • Ubiquitination at isoforms=2, 3397 and Lys481
  • Modification sites at PhosphoSitePlus

Antibody Products

  • R&D Systems Antibodies for ZBTB17 (Miz-1/ZBTB17)
  • Cell Signaling Technology (CST) Antibodies for ZBTB17 (ZBTB17)

No data available for DME Specific Peptides for ZBTB17 Gene

Domains & Families for ZBTB17 Gene

Gene Families for ZBTB17 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Transcription factors

Suggested Antigen Peptide Sequences for ZBTB17 Gene

Graphical View of Domain Structure for InterPro Entry

Q13105

UniProtKB/Swiss-Prot:

ZBT17_HUMAN :
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
Family:
  • Belongs to the krueppel C2H2-type zinc-finger protein family.
genes like me logo Genes that share domains with ZBTB17: view

Function for ZBTB17 Gene

Molecular function for ZBTB17 Gene

UniProtKB/Swiss-Prot Function:
Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation. Represses RB1 transcription; this repression can be blocked by interaction with ZBTB49 isoform 3/ZNF509S1 (PubMed:25245946).

Phenotypes From GWAS Catalog for ZBTB17 Gene

Gene Ontology (GO) - Molecular Function for ZBTB17 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding IMP 9312026
GO:0001047 core promoter binding IDA 19160485
GO:0001077 transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding IMP 9312026
GO:0001223 transcription coactivator binding IPI 19160485
GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding IMP 19160485
genes like me logo Genes that share ontologies with ZBTB17: view
genes like me logo Genes that share phenotypes with ZBTB17: view

Animal Models for ZBTB17 Gene

MGI Knock Outs for ZBTB17:

Animal Model Products

CRISPR Products

miRNA for ZBTB17 Gene

miRTarBase miRNAs that target ZBTB17

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for ZBTB17
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for ZBTB17 Gene

Localization for ZBTB17 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ZBTB17 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for ZBTB17 gene
Compartment Confidence
nucleus 5
cytosol 2

Gene Ontology (GO) - Cellular Components for ZBTB17 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
GO:0005654 nucleoplasm TAS --
GO:0032993 protein-DNA complex IMP 19160485
GO:0043234 protein complex IDA 19160485
genes like me logo Genes that share ontologies with ZBTB17: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for ZBTB17 Gene

Pathways & Interactions for ZBTB17 Gene

genes like me logo Genes that share pathways with ZBTB17: view

Gene Ontology (GO) - Biological Process for ZBTB17 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0001702 gastrulation with mouth forming second IEA --
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
GO:0006366 transcription from RNA polymerase II promoter IEA --
GO:0007275 multicellular organism development IEA --
genes like me logo Genes that share ontologies with ZBTB17: view

No data available for SIGNOR curated interactions for ZBTB17 Gene

Drugs & Compounds for ZBTB17 Gene

(1) Drugs for ZBTB17 Gene - From: HMDB and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Zinc Approved Pharma 2359
genes like me logo Genes that share compounds with ZBTB17: view

Transcripts for ZBTB17 Gene

Unigene Clusters for ZBTB17 Gene

Zinc finger and BTB domain containing 17:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for ZBTB17
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB17 Gene

ExUns: 1a · 1b · 1c · 1d · 1e ^ 2 ^ 3 ^ 4 ^ 5a · 5b · 5c · 5d · 5e ^ 6a · 6b ^ 7a · 7b ^ 8a · 8b · 8c ^ 9a · 9b · 9c · 9d ^ 10a · 10b ^
SP1: - - - - - - - - - - - - - -
SP2:
SP3: - - - - - - - - - -
SP4: - - - - - - - - - -
SP5: - - - - - - - - -
SP6:
SP7:
SP8:
SP9: - - - - - - - - - -
SP10: - - - - - - - - -
SP11: - - - - - - - - - -
SP12: - - - - - - - - - - -
SP13: - - - - - - - - - - - - - - - - - -
SP14: - - - - - -
SP15:
SP16: - - - - - -
SP17: - - -
SP18: - - - - - -
SP19:
SP20: - - - -
SP21:
SP22:
SP23:

ExUns: 11 ^ 12 ^ 13 ^ 14a · 14b · 14c · 14d ^ 15a · 15b ^ 16a · 16b · 16c ^ 17a · 17b ^ 18a · 18b ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24
SP1:
SP2: - - - - -
SP3:
SP4:
SP5:
SP6: -
SP7: - - - -
SP8: - - - -
SP9:
SP10:
SP11:
SP12:
SP13: - - - - - - - - - - - - - - - - -
SP14:
SP15: -
SP16:
SP17:
SP18:
SP19:
SP20:
SP21: -
SP22:
SP23: -

Relevant External Links for ZBTB17 Gene

GeneLoc Exon Structure for
ZBTB17
ECgene alternative splicing isoforms for
ZBTB17

Expression for ZBTB17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ZBTB17 Gene

Protein differential expression in normal tissues from HIPED for ZBTB17 Gene

This gene is overexpressed in Platelet (43.9) and Adrenal (17.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for ZBTB17 Gene



Protein tissue co-expression partners for ZBTB17 Gene

NURSA nuclear receptor signaling pathways regulating expression of ZBTB17 Gene:

ZBTB17

SOURCE GeneReport for Unigene cluster for ZBTB17 Gene:

Hs.433764

mRNA Expression by UniProt/SwissProt for ZBTB17 Gene:

Q13105-ZBT17_HUMAN
Tissue specificity: Expressed in germinal center B-cells.

Evidence on tissue expression from TISSUES for ZBTB17 Gene

  • Nervous system(4.9)
  • Eye(2.1)
genes like me logo Genes that share expression patterns with ZBTB17: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZBTB17 Gene

Orthologs for ZBTB17 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ZBTB17 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ZBTB17 33 34
  • 99.42 (n)
dog
(Canis familiaris)
Mammalia ZBTB17 33 34
  • 90.84 (n)
cow
(Bos Taurus)
Mammalia ZBTB17 33 34
  • 90.13 (n)
rat
(Rattus norvegicus)
Mammalia Zbtb17 33
  • 86.82 (n)
mouse
(Mus musculus)
Mammalia Zbtb17 33 16 34
  • 86.02 (n)
oppossum
(Monodelphis domestica)
Mammalia ZBTB17 34
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia ZBTB17 34
  • 69 (a)
OneToOne
chicken
(Gallus gallus)
Aves ZBTB17 33 34
  • 76.37 (n)
lizard
(Anolis carolinensis)
Reptilia ZBTB17 34
  • 65 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia zbtb17 33
  • 72.35 (n)
Str.20427 33
African clawed frog
(Xenopus laevis)
Amphibia Xl.14330 33
zebrafish
(Danio rerio)
Actinopterygii zbtb17 34
  • 61 (a)
OneToOne
LOC564967 33
sea squirt
(Ciona savignyi)
Ascidiacea CSA.5542 34
  • 17 (a)
OneToOne
Species where no ortholog for ZBTB17 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ZBTB17 Gene

ENSEMBL:
Gene Tree for ZBTB17 (if available)
TreeFam:
Gene Tree for ZBTB17 (if available)

Paralogs for ZBTB17 Gene

Paralogs for ZBTB17 Gene

(315) SIMAP similar genes for ZBTB17 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with ZBTB17: view

Variants for ZBTB17 Gene

Sequence variations from dbSNP and Humsavar for ZBTB17 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000014596 -- 15,973,304(+) GACAC(C/T)GGGAC intron-variant
rs1000034969 -- 15,944,717(+) TGGGC(A/C)TTGCA nc-transcript-variant, reference, missense
rs1000063228 -- 15,951,672(+) CACCT(C/T)CAACC intron-variant
rs1000200450 -- 15,946,088(+) CCTCA(C/T)TACCC intron-variant
rs1000342333 -- 15,957,388(+) GTGTG(C/T)GGCAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ZBTB17 Gene

Variant ID Type Subtype PubMed ID
nsv508936 CNV insertion 20534489
nsv833647 CNV loss 17160897
nsv833758 CNV gain+loss 17160897
nsv954843 CNV deletion 24416366

Variation tolerance for ZBTB17 Gene

Residual Variation Intolerance Score: 9.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.75; 33.21% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for ZBTB17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZBTB17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ZBTB17 Gene

Disorders for ZBTB17 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ZBTB17 Gene - From: DISEASES

Disorder Aliases PubMed IDs
split hand-foot malformation 1
  • shfd1
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ZBTB17

Genetic Association Database (GAD)
ZBTB17
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZBTB17
genes like me logo Genes that share disorders with ZBTB17: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ZBTB17 Gene

Publications for ZBTB17 Gene

  1. A beta-sheet interaction interface directs the tetramerisation of the Miz-1 POZ domain. (PMID: 17880999) Stead MA … Wright SC (Journal of molecular biology 2007) 3 4 22 60
  2. A cleaved form of MAGE-A4 binds to Miz-1 and induces apoptosis in human cells. (PMID: 14739298) Sakurai T … Fujita J (The Journal of biological chemistry 2004) 3 4 22 60
  3. Host cell factor-1 interacts with and antagonizes transactivation by the cell cycle regulatory factor Miz-1. (PMID: 12244100) Piluso D … Capone JP (The Journal of biological chemistry 2002) 3 4 22 60
  4. An alternative pathway for gene regulation by Myc. (PMID: 9312026) Peukert K … Eilers M (The EMBO journal 1997) 3 4 22 60
  5. Association of Myc with the zinc-finger protein Miz-1 defines a novel pathway for gene regulation by Myc. (PMID: 9308237) Schneider A … Hänel F (Current topics in microbiology and immunology 1997) 3 4 22 60

Products for ZBTB17 Gene

Sources for ZBTB17 Gene

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