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Aliases for ZBTB11-AS1 Gene

Subcategory (RNA class) for ZBTB11-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ZBTB11-AS1 Gene

  • ZBTB11 Antisense RNA 1 2 3 5

External Ids for ZBTB11-AS1 Gene

ORGUL Members for ZBTB11-AS1 Gene

Previous GeneCards Identifiers for ZBTB11-AS1 Gene

  • GC03P101397

Summaries for ZBTB11-AS1 Gene

GeneCards Summary for ZBTB11-AS1 Gene

ZBTB11-AS1 (ZBTB11 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for ZBTB11-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBTB11-AS1 Gene

Genomics for ZBTB11-AS1 Gene

Regulatory Elements for ZBTB11-AS1 Gene

Enhancers for ZBTB11-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H101683 1.5 FANTOM5 ENCODE 34.5 +9.4 9375 5 PKNOX1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF207 ZNF143 FOS ZBTB11-AS1 SENP7 RPS18P5 ZBTB11 RPL24 TFG PDCL3P4 NXPE3 ZNF90P1 PCNP
GH03H101643 1.4 Ensembl ENCODE dbSUPER 24.3 -32.3 -32279 1 ATF1 ZNF766 GATA2 ELK1 CAVIN1 ZBTB2 ZBTB11 USF2 ZEB2 HDAC8 SENP7 ZBTB11-AS1 RPL24 NXPE3 TFG PDCL3P4 GC03P101648 PIR36650
GH03H101723 1.6 FANTOM5 ENCODE dbSUPER 13.6 +48.9 48908 2 PKNOX1 ATF1 ARNT ARID4B SIN3A FEZF1 DMAP1 YY1 ETS1 ZNF766 NXPE3 ZBTB11-AS1 CEP97
GH03H101867 1.4 Ensembl ENCODE dbSUPER 13.4 +192.1 192084 1 HDAC1 FOXA2 PKNOX1 ATF1 TBL1XR1 RAD21 YY1 TCF12 ZNF121 GATA2 SENP7 ZBTB11-AS1 ZNF90P1 ZPLD1 GC03P101864 GC03M101929
GH03H101720 1.1 Ensembl ENCODE 15.4 +45.4 45390 2 RB1 BACH1 CHD4 ZMYM3 RBBP5 ZNF384 RELA POLR2A ZNF143 PRDM10 NXPE3 ZBTB11 ZBTB11-AS1 RPL24 GC03P101721 CEP97
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ZBTB11-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for ZBTB11-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000155783 170 2401 HDGF FOXA2 PKNOX1 MLX ARNT ARID4B SIN3A DMAP1 YY1 ZNF143

Genomic Location for ZBTB11-AS1 Gene

Chromosome:
3
Start:
101,676,430 bp from pter
End:
101,679,217 bp from pter
Size:
2,788 bases
Orientation:
Plus strand

Genomic View for ZBTB11-AS1 Gene

Genes around ZBTB11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ZBTB11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ZBTB11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBTB11-AS1 Gene

Proteins for ZBTB11-AS1 Gene

Post-translational modifications for ZBTB11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZBTB11-AS1 Gene

Domains & Families for ZBTB11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZBTB11-AS1 Gene

Function for ZBTB11-AS1 Gene

Phenotypes From GWAS Catalog for ZBTB11-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ZBTB11-AS1 Gene

Localization for ZBTB11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ZBTB11-AS1 Gene

Pathways & Interactions for ZBTB11-AS1 Gene

SuperPathways for ZBTB11-AS1 Gene

No Data Available

Interacting Proteins for ZBTB11-AS1 Gene

Gene Ontology (GO) - Biological Process for ZBTB11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ZBTB11-AS1 Gene

Drugs & Compounds for ZBTB11-AS1 Gene

No Compound Related Data Available

Transcripts for ZBTB11-AS1 Gene

mRNA/cDNA for ZBTB11-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ZBTB11-AS1 Gene

No ASD Table

Relevant External Links for ZBTB11-AS1 Gene

GeneLoc Exon Structure for
ZBTB11-AS1
ECgene alternative splicing isoforms for
ZBTB11-AS1

Expression for ZBTB11-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ZBTB11-AS1 Gene

Orthologs for ZBTB11-AS1 Gene

Evolution for ZBTB11-AS1 Gene

ENSEMBL:
Gene Tree for ZBTB11-AS1 (if available)
TreeFam:
Gene Tree for ZBTB11-AS1 (if available)

No data available for Orthologs for ZBTB11-AS1 Gene

Paralogs for ZBTB11-AS1 Gene

No data available for Paralogs for ZBTB11-AS1 Gene

Variants for ZBTB11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ZBTB11-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000083406 -- 101,675,936(+) AACAC(A/C)CCGCC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000202168 -- 101,675,494(+) TTTTC(G/T)GTAGC intron-variant, upstream-variant-2KB
rs1000499192 -- 101,675,655(+) GGTTC(C/T)CAAGG intron-variant, upstream-variant-2KB
rs1001618498 -- 101,676,501(+) CAGAG(A/G)CGTCC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1002215022 -- 101,677,682(+) TAGTC(A/C)ATGTT nc-transcript-variant, upstream-variant-2KB

Relevant External Links for ZBTB11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ZBTB11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for ZBTB11-AS1 Gene

Disorders for ZBTB11-AS1 Gene

Relevant External Links for ZBTB11-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ZBTB11-AS1

No disorders were found for ZBTB11-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ZBTB11-AS1 Gene

Publications for ZBTB11-AS1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  4. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for ZBTB11-AS1 Gene

Sources for ZBTB11-AS1 Gene

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