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Aliases for ZBED3-AS1 Gene

Subcategory (RNA class) for ZBED3-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for ZBED3-AS1 Gene

  • ZBED3 Antisense RNA 1 2 3
  • ZBED3 Antisense RNA 1 (Non-Protein Coding) 2 3
  • CTC-564N23.3 3

External Ids for ZBED3-AS1 Gene

ORGUL Members for ZBED3-AS1 Gene

Previous GeneCards Identifiers for ZBED3-AS1 Gene

  • GC05P076384

Summaries for ZBED3-AS1 Gene

GeneCards Summary for ZBED3-AS1 Gene

ZBED3-AS1 (ZBED3 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBED3-AS1 Gene

Genomics for ZBED3-AS1 Gene

Genomic Location for ZBED3-AS1 Gene

Start:
77,086,740 bp from pter
End:
77,166,909 bp from pter
Size:
80,170 bases
Orientation:
Plus strand

Genomic View for ZBED3-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZBED3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBED3-AS1 Gene

No data available for Regulatory Elements for ZBED3-AS1 Gene

Proteins for ZBED3-AS1 Gene

Post-translational modifications for ZBED3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ZBED3-AS1 Gene

Domains for ZBED3-AS1 Gene

Gene Families for ZBED3-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ZBED3-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ZBED3-AS1 Gene

Function for ZBED3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ZBED3-AS1 Gene

Localization for ZBED3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ZBED3-AS1 Gene

Pathways for ZBED3-AS1 Gene

SuperPathways for ZBED3-AS1 Gene

No Data Available

Interacting Proteins for ZBED3-AS1 Gene

Gene Ontology (GO) - Biological Process for ZBED3-AS1 Gene

None

No data available for Pathways by source for ZBED3-AS1 Gene

Transcripts for ZBED3-AS1 Gene

mRNA/cDNA for ZBED3-AS1 Gene

(4) Additional mRNA sequences :
(21) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZBED3-AS1 Gene

ZBED3 antisense RNA 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ZBED3-AS1
    • Block miRNA regulation of ZBED3-AS1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for ZBED3-AS1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for ZBED3-AS1 Gene

    No ASD Table

    Relevant External Links for ZBED3-AS1 Gene

    GeneLoc Exon Structure for
    ZBED3-AS1
    ECgene alternative splicing isoforms for
    ZBED3-AS1

    Expression for ZBED3-AS1 Gene

    mRNA expression in normal human tissues for ZBED3-AS1 Gene

    mRNA differential expression in normal tissues according to GTEx for ZBED3-AS1 Gene

    This gene is overexpressed in Adipose - Visceral (Omentum) (4.3).

    SOURCE GeneReport for Unigene cluster for ZBED3-AS1 Gene Hs.161338

    genes like me logo Genes that share expressions with ZBED3-AS1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for ZBED3-AS1 Gene

    Orthologs for ZBED3-AS1 Gene

    Evolution for ZBED3-AS1 Gene

    ENSEMBL:
    Gene Tree for ZBED3-AS1 (if available)
    TreeFam:
    Gene Tree for ZBED3-AS1 (if available)

    No data available for Orthologs for ZBED3-AS1 Gene

    Paralogs for ZBED3-AS1 Gene

    No data available for Paralogs for ZBED3-AS1 Gene

    Variants for ZBED3-AS1 Gene

    Sequence variations from dbSNP and Humsavar for ZBED3-AS1 Gene

    SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
    rs1135423 -- 77,141,875(+) TTACC(A/G)TAATA intron-variant
    rs3857395 -- 77,110,626(-) AGCTG(A/C)AGCTT intron-variant
    rs3924674 -- 77,145,171(+) AAAAG(C/T)AGAAA intron-variant
    rs3924675 -- 77,145,251(+) aagtg(C/T)tgaag intron-variant
    rs3924676 -- 77,145,591(+) TTTTG(A/G)AAGCT intron-variant

    Relevant External Links for ZBED3-AS1 Gene

    HapMap Linkage Disequilibrium report
    ZBED3-AS1

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ZBED3-AS1 Gene

    Disorders for ZBED3-AS1 Gene

    No disorders were found for ZBED3-AS1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZBED3-AS1 Gene

    Publications for ZBED3-AS1 Gene

    1. Long noncoding RNAs expression signatures in chondrogenic differentiation of human bone marrow mesenchymal stem cells. (PMID: 25482444) Wang L. … Wang Y. (Biochem. Biophys. Res. Commun. 2015) 2 3
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
    3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
    4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
    5. Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis. (PMID: 20581827) Voight B.F. … . (Nat. Genet. 2010) 3

    Products for ZBED3-AS1 Gene

    Sources for ZBED3-AS1 Gene

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