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Aliases for ZBED2 Gene

Aliases for ZBED2 Gene

  • Zinc Finger, BED-Type Containing 2 2 3

External Ids for ZBED2 Gene

Previous GeneCards Identifiers for ZBED2 Gene

  • GC03M110882
  • GC03M112593
  • GC03M112632
  • GC03M112794
  • GC03M111311
  • GC03M108686

Summaries for ZBED2 Gene

GeneCards Summary for ZBED2 Gene

ZBED2 (Zinc Finger, BED-Type Containing 2) is a Protein Coding gene. An important paralog of this gene is ZBED3.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ZBED2 Gene

Genomics for ZBED2 Gene

Regulatory Elements for ZBED2 Gene

Genomic Location for ZBED2 Gene

111,592,900 bp from pter
111,595,443 bp from pter
2,544 bases
Minus strand

Genomic View for ZBED2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ZBED2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ZBED2 Gene

Proteins for ZBED2 Gene

  • Protein details for ZBED2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Zinc finger BED domain-containing protein 2
    Protein Accession:
    Secondary Accessions:
    • D3DN62

    Protein attributes for ZBED2 Gene

    218 amino acids
    Molecular mass:
    25122 Da
    Quaternary structure:
    No Data Available
    • Sequence=AAH03536.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AAH71956.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for ZBED2 Gene

neXtProt entry for ZBED2 Gene

Proteomics data for ZBED2 Gene at MOPED

Post-translational modifications for ZBED2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for ZBED2 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for ZBED2 Gene

Domains for ZBED2 Gene

Gene Families for ZBED2 Gene

Protein Domains for ZBED2 Gene

Suggested Antigen Peptide Sequences for ZBED2 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 BED-type zinc finger.
  • Contains 1 BED-type zinc finger.
genes like me logo Genes that share domains with ZBED2: view

Function for ZBED2 Gene

Gene Ontology (GO) - Molecular Function for ZBED2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with ZBED2: view

Animal Model Products

CRISPR Products

miRNA for ZBED2 Gene

miRTarBase miRNAs that target ZBED2

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZBED2

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targets and HOMER Transcription for ZBED2 Gene

Localization for ZBED2 Gene

Subcellular locations from

Jensen Localization Image for ZBED2 Gene COMPARTMENTS Subcellular localization image for ZBED2 gene
Compartment Confidence
nucleus 3
cytosol 2
mitochondrion 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ZBED2 Gene

Pathways for ZBED2 Gene

SuperPathways for ZBED2 Gene

No Data Available

Interacting Proteins for ZBED2 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
Selected Interacting proteins: ENSP00000321370 for ZBED2 Gene via STRING

Gene Ontology (GO) - Biological Process for ZBED2 Gene


No data available for Pathways by source for ZBED2 Gene

Transcripts for ZBED2 Gene

mRNA/cDNA for ZBED2 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(28) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ZBED2 Gene

Zinc finger, BED-type containing 2:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for ZBED2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for ZBED2 Gene

No ASD Table

Relevant External Links for ZBED2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ZBED2 Gene

mRNA expression in normal human tissues for ZBED2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for ZBED2 Gene

This gene is overexpressed in Thyroid (22.6), Esophagus - Mucosa (7.3), and Vagina (6.2).

Protein differential expression in normal tissues for ZBED2 Gene

This gene is overexpressed in Nasal epithelium (69.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for ZBED2 Gene

SOURCE GeneReport for Unigene cluster for ZBED2 Gene Hs.136912

genes like me logo Genes that share expressions with ZBED2: view

Expression partners for ZBED2 Gene

* - Elite partner

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA Expression by UniProt/SwissProt for ZBED2 Gene

Orthologs for ZBED2 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ZBED2 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia ZBED2 35
  • 86.02 (n)
  • 86.64 (a)
ZBED2 36
  • 86 (a)
(Canis familiaris)
Mammalia ZBED2 35
  • 86.79 (n)
  • 90.32 (a)
ZBED2 36
  • 90 (a)
(Pan troglodytes)
Mammalia ZBED2 35
  • 98.93 (n)
  • 98.62 (a)
ZBED2 36
  • 99 (a)
(Monodelphis domestica)
Mammalia ZBED2 36
  • 54 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 61 (a)
Species with no ortholog for ZBED2:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ZBED2 Gene

Gene Tree for ZBED2 (if available)
Gene Tree for ZBED2 (if available)

Paralogs for ZBED2 Gene

Paralogs for ZBED2 Gene

(1) SIMAP similar genes for ZBED2 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with ZBED2: view

Variants for ZBED2 Gene

Structural Variations from Database of Genomic Variants (DGV) for ZBED2 Gene

Variant ID Type Subtype PubMed ID
nsv460821 CNV Gain 19166990

Relevant External Links for ZBED2 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for ZBED2 Gene

Disorders for ZBED2 Gene

No disorders were found for ZBED2 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for ZBED2 Gene

Publications for ZBED2 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. ZBED evolution: repeated utilization of DNA transposons as regulators of diverse host functions. (PMID: 23533661) Hayward A. … Jern P. (PLoS ONE 2013) 2 3
  3. The DNA sequence, annotation and analysis of human chromosome 3. (PMID: 16641997) Muzny D.M. … Gibbs R.A. (Nature 2006) 4
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh J.H. … Kim N.S. (Mamm. Genome 2005) 3

Products for ZBED2 Gene

Sources for ZBED2 Gene

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