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Aliases & Descriptions for ZBED2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| MGC10796 1, 2 | | OTTHUMP00000082693 2 |
| | | Descriptions |
|---|
| zinc finger, BED domain containing 2 2 | | zinc finger, BED-type containing 2 2 |
|
| | Search outside databases for aliases for ZBED2 genePrevious GC identifers: GC03M110882 GC03M112593 GC03M112632 |
Summaries for ZBED2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location for ZBED2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ZBED2 gene 
Entrez Gene cytogenetic band: 3q13.13 Ensembl cytogenetic band: 3q13.13 HGNC cytogenetic band: 3p13-q13.2ZBED2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure GeneLoc location for GC03M112794:
(about GC identifiers)
Start:
|
112,794,437 bp from pter |
End:
|
112,796,856 bp from pter |
Size:
|
2,420 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000003.10 NT_005612.15
| Proteins for ZBED2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ZBED2_HUMAN, Q9BTP6 (See
protein sequence)Recommended Name: Zinc finger BED domain-containing protein 2 Size: 217 amino acids; 24991 Da
PDB structures from and Proteopedia :2DJR (3D)
 REFSEQ proteins: NP_078784.2
ENSEMBL proteins: ENSP00000321370 ENSP00000373183
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for ZBED2: Assays for ZBED2: | Protein
Domains/ Families for ZBED2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9BTP6
ProtoNet protein and cluster: Q9BTP6 1 Blocks protein family: IPB000515 Binding-protein-dependent transport systems inner membrane component
UniProtKB/Swiss-Prot: ZBED2_HUMAN, Q9BTP6Similarity: Contains 1 BED-type zinc finger | Gene Function for ZBED2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_024508
Applied Biosystems Silencer® siRNAs for ZBED2
Sigma-Aldrich siRNA for ZBED2  Sigma-Aldrich shRNA for ZBED2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_024508                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_024508                                  untagged cDNA clone in CMV expression vector: NM_024508 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_024508
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ZBED2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| -- |
Drugs & Compounds for ZBED2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for ZBED2
|
Transcripts for ZBED2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_024508
Sigma-Aldrich siRNA for ZBED2  Sigma-Aldrich shRNA for ZBED2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_024508 REFSEQ mRNAs for ZBED2 gene: NM_024508.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_024508               OriGene GFP tagged cDNA clone in CMV expression vector: NM_024508                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_024508                                  untagged cDNA clone in CMV expression vector: NM_024508  Additional cDNA sequence: BC003536.1 BC071956.1 1 DOTS entry: DT.434233 24/28 AceView cDNA sequences (see all 28
):AI813590 BQ878850 BC071956 AW575079 BC003536 CA440278 BM990943 NM_024508 AA810929 AI582219 D78844 AW104256 AA830718 BG232007 AA923758 AW575241 AW402886 CN479204 AW402327 BE746513 CD632045 BM847001 BE898283 BE740032
highest scoring ESTs for ZBED2:BE898283 D78844 AA729527 AA810929 AA830718 AA923758 AI582219 AI813590 AI924459 AW104256 Unigene Cluster for ZBED2: Zinc finger, BED-type containing 2 Hs.136912 [show with all ESTs]Unigene Representative Sequence: NM_024508
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000317012
ENST00000383685
|
Expression for ZBED2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ZBED2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ZBED2
1 / 2 / 3 3 probe-sets matching ZBED2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TACTGGTGGA
SOURCE GeneReport for Unigene cluster: Hs.136912
|
Orthologs for ZBED2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ZBED2 gene from 3 species
About this table Species with no ortholog for ZBED2
ENSEMBL Gene Tree for ZBED2 | Paralogs for ZBED2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ZBED2 gene
- ZBED32
|
SNPs/Variants for ZBED2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
| -- |
Disorders & Mutations for ZBED2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News for ZBED2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ZBED2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 3 PubMed articles for ZBED2 gene: |
Search for ZBED2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ZBED2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ZBED2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ZBED2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ZBED2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ZBED2:

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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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